GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000155-TA|BGIBMGA000155-PA|IPR003521|Nucleotide-
sensitive chloride conductance regulator
         (201 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084214-1|AAL89952.1|  215|Drosophila melanogaster SD10511p pro...    44   1e-04
AF216522-1|AAF21126.1|  215|Drosophila melanogaster ICLn protein...    44   1e-04
AE013599-2518|AAF57826.1|  215|Drosophila melanogaster CG4924-PA...    44   1e-04
AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausag...    33   0.20 
AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-P...    33   0.20 
AY119019-1|AAM50879.1|  318|Drosophila melanogaster LP04690p pro...    29   4.4  
AE014296-1071|AAX52760.1|  318|Drosophila melanogaster CG12755-P...    29   4.4  
AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-P...    29   5.8  
Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.         28   7.7  

>AY084214-1|AAL89952.1|  215|Drosophila melanogaster SD10511p
          protein.
          Length = 215

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)

Query: 2  VVVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINL 61
          +V+  + + P  G+L  + + KL + D+ +G  T+YI +N + W     P+   A  I++
Sbjct: 1  MVLIMHVSPPEHGLLYTANNIKLKLGDKVVGEGTVYIAQNTLSW----QPT-ELAEGISI 55

Query: 62 LYPSISLHAIQREPSPALYMVLNYEL 87
           +  +SLH I   P   +Y +L++++
Sbjct: 56 EWKQVSLHGISSNPRKCIYFMLDHKV 81


>AF216522-1|AAF21126.1|  215|Drosophila melanogaster ICLn protein
          protein.
          Length = 215

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 5/86 (5%)

Query: 2  VVVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINL 61
          +V+  + + P  G+L  + + KL + D+ +G  T+YI +N + W     P+   A  I++
Sbjct: 1  MVLIMHVSPPEHGLLYTANNIKLKLGDKVVGEGTVYIAQNTLSW----QPT-ELAEGISI 55

Query: 62 LYPSISLHAIQREPSPALYMVLNYEL 87
           +  +SLH I   P   +Y +L++++
Sbjct: 56 EWKQVSLHGISSNPRKCIYFMLDHKV 81


>AE013599-2518|AAF57826.1|  215|Drosophila melanogaster CG4924-PA
          protein.
          Length = 215

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 2  VVVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINL 61
          +V+    + P  G+L  + + KL + D+ +G  T+YI +N + W     P+   A  I++
Sbjct: 1  MVLIMRVSPPEHGLLYTANNIKLKLGDKVVGEGTVYIAQNTLSW----QPT-ELAEGISI 55

Query: 62 LYPSISLHAIQREPSPALYMVLNYEL 87
           +  +SLH I   P   +Y +L++++
Sbjct: 56 EWKQVSLHGISSNPRKCIYFMLDHKV 81


>AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausage
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 9   AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 62
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 63  YPSISLHA 70
            P +  HA
Sbjct: 385 SPGVDRHA 392


>AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-PA
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 9   AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 62
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 63  YPSISLHA 70
            P +  HA
Sbjct: 385 SPGVDRHA 392


>AY119019-1|AAM50879.1|  318|Drosophila melanogaster LP04690p
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 19  SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 78
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 79  LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQ 128
           +Y  LN  L   ++ +QA +             QP+ +   +P +++ ++
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQHNIR 302


>AE014296-1071|AAX52760.1|  318|Drosophila melanogaster CG12755-PC,
           isoform C protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 19  SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 78
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 79  LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQ 128
           +Y  LN  L   ++ +QA +             QP+ +   +P +++ ++
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQHNIR 302


>AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-PB,
           isoform B protein.
          Length = 653

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 19  SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 78
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 79  LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQAM 130
           +Y  LN  L   ++ +QA +             QP+ +   +P ++ ++ A+
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQVKIFAL 304


>Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 19  SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 78
           +P+TK +     L  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 360 APNTKTIELGLNLAMSTYYTTKNAVTGHVSRQTSNSQTPSANTKI-DYNVGVVEK-ASPP 417

Query: 79  LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQAM 130
           +Y  LN  L   ++ +QA +             QP+ +   +P ++ ++ A+
Sbjct: 418 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQVKIFAL 468


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,629,460
Number of Sequences: 52641
Number of extensions: 310649
Number of successful extensions: 448
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 439
Number of HSP's gapped (non-prelim): 12
length of query: 201
length of database: 24,830,863
effective HSP length: 81
effective length of query: 120
effective length of database: 20,566,942
effective search space: 2468033040
effective search space used: 2468033040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)