Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000155-TA|BGIBMGA000155-PA|IPR003521|Nucleotide-
sensitive chloride conductance regulator
(201 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical p... 57 8e-09
Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical pr... 57 8e-09
AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein. 57 8e-09
Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical p... 48 5e-06
Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein. 48 5e-06
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 28 5.3
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 28 5.3
>Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 57.2 bits (132), Expect = 8e-09
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQREPS--PALYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFI 120
YP+I LHAI + S P+ ++ + + R L + + +P ++RF+
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSGL--ELAAAELEDEESDDDEEEPALEIRFV 114
Query: 121 PENENELQAMYSAMCQGQE 139
P++++ L +Y + GQE
Sbjct: 115 PDDKDSLSQIYHQIAVGQE 133
>Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 57.2 bits (132), Expect = 8e-09
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQREPS--PALYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFI 120
YP+I LHAI + S P+ ++ + + R L + + +P ++RF+
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSGL--ELAAAELEDEESDDDEEEPALEIRFV 114
Query: 121 PENENELQAMYSAMCQGQE 139
P++++ L +Y + GQE
Sbjct: 115 PDDKDSLSQIYHQIAVGQE 133
>AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein.
Length = 205
Score = 57.2 bits (132), Expect = 8e-09
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQREPS--PALYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFI 120
YP+I LHAI + S P+ ++ + + R L + + +P ++RF+
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSGL--ELAAAELEDEESDDDEEEPALEIRFV 114
Query: 121 PENENELQAMYSAMCQGQE 139
P++++ L +Y + GQE
Sbjct: 115 PDDKDSLSQIYHQIAVGQE 133
>Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 48.0 bits (109), Expect = 5e-06
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQRE----PSPALYMVLNYE-----------LR-LPELSQQAG----STXXX 102
YP+I LHAI + PS ++++++ LR + E +Q G +
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSVRRRRRAPVLRTIQEDDEQRGLELAAAELE 116
Query: 103 XXXXXXXXXQPITQLRFIPENENELQAMYSAMCQGQE 139
+P ++RF+P++++ L +Y + GQE
Sbjct: 117 DEESDDDEEEPALEIRFVPDDKDSLSQIYHQIAVGQE 153
>Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 48.0 bits (109), Expect = 5e-06
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQRE----PSPALYMVLNYE-----------LR-LPELSQQAG----STXXX 102
YP+I LHAI + PS ++++++ LR + E +Q G +
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSVRRRRRAPVLRTIQEDDEQRGLELAAAELE 116
Query: 103 XXXXXXXXXQPITQLRFIPENENELQAMYSAMCQGQE 139
+P ++RF+P++++ L +Y + GQE
Sbjct: 117 DEESDDDEEEPALEIRFVPDDKDSLSQIYHQIAVGQE 153
>AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein.
Length = 225
Score = 48.0 bits (109), Expect = 5e-06
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 3 VVSSNFAEPADGVLLQSPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLL 62
++ + ++P +G+ L + + + LG TLYIT++ VIW S +G ++
Sbjct: 1 MILTEVSQPTEGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWIS--SAAGTKG--FSVA 56
Query: 63 YPSISLHAIQRE----PSPALYMVLNYE-----------LR-LPELSQQAG----STXXX 102
YP+I LHAI + PS ++++++ LR + E +Q G +
Sbjct: 57 YPAIVLHAISTDVSVFPSEHIFVMVDQRKSVRRRRRAPVLRTIQEDDEQRGLELAAAELE 116
Query: 103 XXXXXXXXXQPITQLRFIPENENELQAMYSAMCQGQE 139
+P ++RF+P++++ L +Y + GQE
Sbjct: 117 DEESDDDEEEPALEIRFVPDDKDSLSQIYHQIAVGQE 153
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 14 GVLLQSPSTKLLINDQELGTATLYITENNV-IWGGGVSPSGNPAPTINLLYPSISLHAIQ 72
GVLL+S ++ I + GT Y+++N V + + +P +++ P + +
Sbjct: 31 GVLLRSITSHFQIPAAQYGTLLAYVSDNVVRFYAETYRRNNSPWKGMHMYIPGKLIFSTD 90
Query: 73 REPSPALYMVLNYELRLPELSQQAG 97
E L +L + P++ QAG
Sbjct: 91 PESQHQLIWILMKLSKTPKILVQAG 115
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 14 GVLLQSPSTKLLINDQELGTATLYITENNV-IWGGGVSPSGNPAPTINLLYPSISLHAIQ 72
GVLL+S ++ I + GT Y+++N V + + +P +++ P + +
Sbjct: 31 GVLLRSITSHFQIPAAQYGTLLAYVSDNVVRFYAETYRRNNSPWKGMHMYIPGKLIFSTD 90
Query: 73 REPSPALYMVLNYELRLPELSQQAG 97
E L +L + P++ QAG
Sbjct: 91 PESQHQLIWILMKLSKTPKILVQAG 115
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,038,414
Number of Sequences: 27539
Number of extensions: 137040
Number of successful extensions: 183
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 171
Number of HSP's gapped (non-prelim): 11
length of query: 201
length of database: 12,573,161
effective HSP length: 78
effective length of query: 123
effective length of database: 10,425,119
effective search space: 1282289637
effective search space used: 1282289637
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -