Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000154-TA|BGIBMGA000154-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(591 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 36 0.11
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 35 0.14
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 35 0.14
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 34 0.25
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 34 0.32
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 33 0.43
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.57
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 33 0.57
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z69664-5|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 33 0.75
AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 32 0.99
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 32 0.99
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 32 1.3
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 30 4.0
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 30 4.0
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 30 4.0
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 30 4.0
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 30 5.3
Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical pr... 30 5.3
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 30 5.3
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 30 5.3
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 30 5.3
Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical pr... 29 7.0
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 29 7.0
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 29 7.0
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z78013-9|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 9.2
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 29 9.2
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 29 9.2
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 29 9.2
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 9.2
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 29 9.2
AL117203-12|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 29 9.2
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 29 9.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 9.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical ... 29 9.2
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 29 9.2
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 35.5 bits (78), Expect = 0.11
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Query: 3 EAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQSVSNLK 62
E F+ +G + + + D +K+WDTET +KQ + H P CL++
Sbjct: 324 EVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRF----HTGHVPYCLKYHPDDDK----- 374
Query: 63 GXXXXXXXXXXXXXXQCIVLGTTNGKLLIYSISQAKIINVWVPAKHFSA--KVTALDWSR 120
++G N K++ + +I+ + +H A +T D +R
Sbjct: 375 --------------NHMFLVGMQNKKIIQWDSRSGEIVQEY--DRHLQAVNSITFFDKNR 418
Query: 121 KYGLYSCTKDSRVYEWNI 138
++ S K R++EW I
Sbjct: 419 RFASTSDDKSVRIWEWEI 436
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 35.1 bits (77), Expect = 0.14
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E +DE+ D D +E+N+++ E E S +ESDE+ D+ + E D+E
Sbjct: 585 EDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEE--DEEEEEEDDSE 636
Score = 31.9 bits (69), Expect = 1.3
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E +DE+ + N+S +E+ D + E S+ ES +E +E+ DD + E
Sbjct: 592 EDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEE--DDSEPE 638
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 547 LDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
LD +D ++D+D D E + E DE DE+ ++ E
Sbjct: 569 LDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEE 608
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 35.1 bits (77), Expect = 0.14
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E +DE+ D D +E+N+++ E E S +ESDE+ D+ + E D+E
Sbjct: 595 EDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEE--DEEEEEEDDSE 646
Score = 31.9 bits (69), Expect = 1.3
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E +DE+ + N+S +E+ D + E S+ ES +E +E+ DD + E
Sbjct: 602 EDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEE--DDSEPE 648
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 547 LDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
LD +D ++D+D D E + E DE DE+ ++ E
Sbjct: 579 LDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEE 618
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 34.3 bits (75), Expect = 0.25
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 3 EAMFSEDGKYYSTITKDGRLKIWDTETN 30
+A+FS +G+Y T D ++KIWD E N
Sbjct: 330 DAIFSSEGRYIFTGGNDNQVKIWDVENN 357
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 33.9 bits (74), Expect = 0.32
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 AMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQSV 58
A +S DG +T +DG++KIW++ ++ T D H TS T ++WT +++
Sbjct: 366 AEYSPDGSLMATGAEDGKVKIWNSRSSFC--TVTFDEH-TSGVTAVKWTQSGRAI 417
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.43
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 539 KQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQL 579
K+DE+ D ++ ++ +D++M+ +ESG S E+DE +
Sbjct: 252 KEDEEENQDDDDEDDNDSDDSEMDADSAESGGSGSENDEDM 292
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 33.1 bits (72), Expect = 0.57
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAEAMFSEDGKYYSTITKDGRLKIWDTETN 30
+ + +SE+ + Y T +KDG +KIWD +N
Sbjct: 262 VTDVHYSENARLYVTASKDGHVKIWDGVSN 291
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 1 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 37
+ A F+++GKY T D +K+W+ TN YT
Sbjct: 306 ICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVYT 342
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 33.1 bits (72), Expect = 0.57
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 353 GYLNDRGLVFEKITPDLKTKTQVLIRGDVKEKKKTKQNDNSLLRTEFHSSE--ATYLDNT 410
G + +RG V +K+T +LK+K V+ R + + T +ND + R E E T +
Sbjct: 36 GVIEERGKV-DKLTEELKSKEAVIRRIQAENESLTFRNDQLVRRVENFQFEPPTTPAASK 94
Query: 411 AVAPRKRTAPGANPSIEVPMEARLQNLALDVNSKSNVAVNENL 453
+ + +K T P + S AR+ L ++ K +A NE L
Sbjct: 95 SHSSKKSTTPTQSDS-AAAAAARIDLLEQELRLK--LAQNERL 134
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 32.7 bits (71), Expect = 0.75
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 540 QDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDD 582
Q E +L+ D D+D D D + E S D+ D++ DD
Sbjct: 87 QQEDADLLNMEDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDD 129
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 32.7 bits (71), Expect = 0.75
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 540 QDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDD 582
Q E +L+ D D+D D D + E S D+ D++ DD
Sbjct: 87 QQEDADLLNMEDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDD 129
>Z69664-5|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
protein K04D7.5 protein.
Length = 1338
Score = 32.7 bits (71), Expect = 0.75
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 538 EKQDEQTA-VLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E+ D T L+ DE+ND D E + E DE ++L +DG+ EI+ +E
Sbjct: 147 EENDTSTRNKLNAGSEEDEEND-DEEEIEDEGEDEDDEEQDELEEDGEHEITGSE 200
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 32.7 bits (71), Expect = 0.75
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 540 QDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDD 582
Q E +L+ D D+D D D + E S D+ D++ DD
Sbjct: 87 QQEDADLLNMEDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDD 129
>AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 32.3 bits (70), Expect = 0.99
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E +DE D D +E+ D D E ++E A DE +E++ ++ + E
Sbjct: 45 EDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENEEVKEEKEDE 93
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/49 (24%), Positives = 26/49 (53%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E ++E+ D ++ D D+D D + + + DE++++ DD + E
Sbjct: 36 EDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENE 84
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E++DE + ++ DED+D D + E DE +++ D+ + + + E
Sbjct: 32 EEEDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDEENEE 85
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E ++E+ + ++ DED D D + E +E +++ D+ + E D E
Sbjct: 28 EDEEEEEDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEEEDEAEDEAEDDE 81
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 32.3 bits (70), Expect = 0.99
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 82 LGTTNGKLLIYSISQAKIINVWVPAK--------HFSAKVT-ALDWSRKYGLYSCTKDSR 132
L ++N L S S K +NVWV ++ H +AKVT A+ S L + + DS
Sbjct: 917 LCSSNDSSLFVSTSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSS 976
Query: 133 VYEWNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTAS--YQLSLWRL 190
+E G V +++N ++T ++ ++++ +NQ +L+T S + + +W +
Sbjct: 977 AKMIKLETGEVMRSFN----DHT---GSVVSLQLTSNNQ-----FLITGSGDFVVQMWDV 1024
Query: 191 HNKDVTLIKSLGYSTSQTAILSLVSFNDTYYIVEGSENERLLSF 234
N I +G + + L++ S ND + +V E+E L F
Sbjct: 1025 TNG--KCISRMGGLMAPVSTLAITS-NDAFVVV-ACEDETLKVF 1064
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 7 SEDGKYYSTITKDGRLKIWDTETNVLKQEYTPDLHLTSPPTCLQWTTVSQ 56
S D KY + T +G + +WD E V + +T + P TC++++ SQ
Sbjct: 1173 SNDDKYAACGTNNGIVALWDLE--VCQCVFTTIQNKGDPITCIRYSVDSQ 1220
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDG 583
E + E V + N+SSDE D + + E DE +E+ S+ G
Sbjct: 223 ENEGEDDVVNENNESSDESEDDEEDEDDEEDDDEDDEEEEEDSESG 268
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 31.1 bits (67), Expect = 2.3
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 6 FSEDGKYYSTITKDGRLKIWD 26
FSE+G Y +T ++DG +K+WD
Sbjct: 388 FSENGYYLATGSEDGEVKLWD 408
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 1 MAEAMFSEDGKYYSTITKDGRLKIWDTET-----NVLKQEYTPDLHLTSPP 46
++ F+ DG Y ++ + DG ++IWD+ T ++ +E+ P H+ P
Sbjct: 235 VSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSP 285
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 539 KQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
K++++ V + + DED+D D+ E ++ DE DDGD++ D +
Sbjct: 809 KRNKKKDVEEDDVDMDEDDDIDLNDLNEEEDGGMEDDDE---DDGDMDDDDED 858
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 547 LDYNDSSDEDNDADMEPSQSESG--ASWDESDEQLSDDGDVEISDAE 591
+D ND ++E+ D ME + G DE DE DD +V+ D +
Sbjct: 829 IDLNDLNEEE-DGGMEDDDEDDGDMDDDDEDDEDAEDDDEVDDDDED 874
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 548 DYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGD 584
D +DSS+ D DA+ E + E D+SDE+ DDG+
Sbjct: 674 DDDDSSEIDWDAESEEVEDEES---DDSDEEDEDDGE 707
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 30.3 bits (65), Expect = 4.0
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 538 EKQDEQTA-VLDYN--DSSDEDNDA---------DMEPSQSESGASWDESDEQLSDDGDV 585
E QD+ T ++D++ D SDED D D E S+S+ +++ DE+ + D+
Sbjct: 688 ENQDDDTHDIVDWDKLDESDEDEDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDL 747
Query: 586 EISDAE 591
E SD E
Sbjct: 748 EDSDDE 753
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 30.3 bits (65), Expect = 4.0
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 542 EQTAVLDYN-DSSDE-DNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E++ +L N D SDE D+D D+E + + ++ DE D D E +A+
Sbjct: 314 EKSRILKKNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDEEAQEAQ 365
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 344 LQQDGNINLGYLNDRGLVFEKITPDLKTKTQVLIRGDVKEKKKTKQNDNSLLRTEFHSSE 403
LQQ G + L +LND L++ +I LK K + D K++KK + SLL +
Sbjct: 334 LQQVGRVALEWLNDEDLLYSRII-GLKLK-----KMDPKKRKKVRHQIMSLLDETDDTHH 387
Query: 404 ATYLDNTAVAPRKRTAPG 421
D++ +P + G
Sbjct: 388 IVDNDDSCSSPSAHSPTG 405
>Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 5.3
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSD---DGDVEISD 589
+ D+ D +D D+D D+D + + +E DE D +G++E+ D
Sbjct: 1701 DDDDDDEEEDDDDDDDDDDEDSDRPAEERQEDEEREEGDEHEQDEQVEGEIEVVD 1755
>Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.9 bits (64), Expect = 5.3
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSD---DGDVEISD 589
+ D+ D +D D+D D+D + + +E DE D +G++E+ D
Sbjct: 1701 DDDDDDEEEDDDDDDDDDDEDSDRPAEERQEDEEREEGDEHEQDEQVEGEIEVVD 1755
>Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical
protein ZK899.6 protein.
Length = 312
Score = 29.9 bits (64), Expect = 5.3
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 547 LDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISD 589
+D+ + + + +D+ + + WDE D DDG+ +I++
Sbjct: 237 IDHMEDATDTETSDVSEDEQVEESDWDEYDSDKLDDGEEDINN 279
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
E+++E+ D +D SD+ + + E S +++ A S +D E+SD E
Sbjct: 215 EEEEEEDEDSDDSDDSDDSEEEEAEGSTAQAPAEKANSSTTTTDQNIGELSDME 268
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 541 DEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
++ + LD ++ +E D D E S+ + DE E+ D+ + E ++E
Sbjct: 873 EDDSDCLDEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESE 923
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E +DE+ + D ++ DED++ D + + E S E +E+ ++ + E
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEE 937
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.9 bits (64), Expect = 5.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 541 DEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
++ + LD ++ +E D D E S+ + DE E+ D+ + E ++E
Sbjct: 873 EDDSDCLDEDEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESE 923
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVE 586
E +DE+ + D ++ DED++ D + + E S E +E+ ++ + E
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEE 937
>Z81484-8|CAE11295.1| 325|Caenorhabditis elegans Hypothetical
protein C47A10.9 protein.
Length = 325
Score = 29.5 bits (63), Expect = 7.0
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 179 VTASYQLSLWRLHNKDVTLIKSLGYSTSQTAILSLV-SFNDTYYIV 223
V A + L LW D ++ LG++T+ +S++ +F + YYI+
Sbjct: 72 VLAGFPLGLWSWLEVDTGIVMFLGFTTAFLMPISVIKTFENRYYIL 117
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
EK+D+ + D D+D D E + G D+ D++ D D E D +
Sbjct: 239 EKKDKNKKYQPVKEEPDLDDDDDDEDDDDDDG---DDDDDEKDDGNDAEKDDGD 289
>Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
EK+D+ + D D+D D E + G D+ D++ D D E D +
Sbjct: 239 EKKDKNKKYQPVKEEPDLDDDDDDEDDDDDDG---DDDDDEKDDGNDAEKDDGD 289
>Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical
protein F54F7.1 protein.
Length = 254
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 538 EKQDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDEQLSDDGD 584
E Q + V+D ++++ ED D ++ + S D+ D LSDD D
Sbjct: 206 EAQSVRWKVVDDDETNPEDEDIEVYDNDDGSDLDKDDKDLFLSDDED 252
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 7.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 550 NDSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISD 589
++SS E N E SES S +ESD + S+D +V++ +
Sbjct: 446 SESSSESNAESTEKQTSES--SGNESDSEESEDSEVDVGE 483
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 548 DYNDSSDEDNDADMEPSQSESGASWDESDEQLSD 581
D +D +ED+D DM+ S +E E +E + D
Sbjct: 378 DEDDEDEEDSDEDMDDSDNEEVEDDSEEEEPMDD 411
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 94 ISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSV---KQTYNIS 150
I K+++ A+ +S KVTA D L + T + V + +I D + K+ YN++
Sbjct: 533 IKTTKLLDRETTAR-YSLKVTARDMGTP-SLNTSTTIAVVLK-DINDNAPTFDKKEYNVT 589
Query: 151 IENNTKQGSNINAIKIIPHNQHKKSRYLV 179
I +GS I +K + +++ +K Y +
Sbjct: 590 ISEEMPRGSQIITLKAVDNDEDQKITYRI 618
>Z78013-9|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 94 ISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSV---KQTYNIS 150
I K+++ A+ +S KVTA D L + T + V + +I D + K+ YN++
Sbjct: 533 IKTTKLLDRETTAR-YSLKVTARDMGTP-SLNTSTTIAVVLK-DINDNAPTFDKKEYNVT 589
Query: 151 IENNTKQGSNINAIKIIPHNQHKKSRYLV 179
I +GS I +K + +++ +K Y +
Sbjct: 590 ISEEMPRGSQIITLKAVDNDEDQKITYRI 618
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1 MAEAMFSEDGKYYSTITKDGRLKIWDTETNVLKQEYT 37
+A FS +GKY D LK+WD ++YT
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 551 DSSDEDNDADMEPSQSESGASWDESDEQLSDDGDVEISDAE 591
D D D + +P + + G D D++ + D E DAE
Sbjct: 207 DEPDRDESIEKQPEKEDDGDELDYGDDEEKEQKDDESMDAE 247
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 550 NDSSDEDNDADMEPSQSESGASW-DESDEQLSDDGDVEISDAE 591
ND+SD +N+A S+ + ASW E + ++ D+E + ++
Sbjct: 540 NDASDSENEASGSDSEPKGSASWMVEENREVDMASDLESASSD 582
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 132 RVYEWNIEDGSVKQTYNISIENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQL 185
R W D S+ + + NN +N N +IPH +S +L+T +QL
Sbjct: 110 RCCNWAFPDKSLLHIHLQTATNNNDSNNNNN--SVIPHGVINRSCHLITDPFQL 161
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.1 bits (62), Expect = 9.2
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 94 ISQAKIINVWVPAKHFSAKVTALDWSRKYGLYSCTKDSRVYEWNIEDGSV---KQTYNIS 150
I K+++ A+ +S KVTA D L + T + V + +I D + K+ YN++
Sbjct: 533 IKTTKLLDRETTAR-YSLKVTARDMGTP-SLNTSTTIAVVLK-DINDNAPTFDKKEYNVT 589
Query: 151 IENNTKQGSNINAIKIIPHNQHKKSRYLV 179
I +GS I +K + +++ +K Y +
Sbjct: 590 ISEEMPRGSQIITLKAVDNDEDQKITYRI 618
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 29.1 bits (62), Expect = 9.2
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 152 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 211
+NN + N ++ Q +K L+ Q ++ LH +D + + Y + + +
Sbjct: 103 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNYVSKED--I 158
Query: 212 SLVSFNDTYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 271
+ +T I+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 159 RKTAEPNTKSIIVKSELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 217
Query: 272 Y 272
Y
Sbjct: 218 Y 218
>AL117203-12|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17 protein.
Length = 412
Score = 29.1 bits (62), Expect = 9.2
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 152 ENNTKQGSNINAIKIIPHNQHKKSRYLVTASYQLSLWRLHNKDVTLIKSLGYSTSQTAIL 211
+NN + N ++ Q +K L+ Q ++ LH +D + + Y + + +
Sbjct: 100 DNNNSEEQNALEARVEMLRQQEKLLELMIRDAQ-AIIELHFED-PIERPYNYVSKED--I 155
Query: 212 SLVSFNDTYYIVEGSENERLLSFWDVTVTDESTQNNNDEPTPNKRHKRKHSAVPVQPTPM 271
+ +T I+ SE + SF ++ VTD ST ++D NK + H+ + P
Sbjct: 156 RKTAEPNTKSIIVKSELDTSSSF-EIQVTDPSTSGSHDMIVRNKNGVKSHALLFTNDPPE 214
Query: 272 Y 272
Y
Sbjct: 215 Y 215
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 29.1 bits (62), Expect = 9.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 417 RTAPGANPSIEVPMEARLQNLALDVNSKSNVAVNENLTKLLIQGLHSKDKDIILT 471
R P P++ +P+E L +D + V V + LI+ LH K KD + T
Sbjct: 203 RFVPSGKPNVSIPIEIIYDGLKID---EKLVKVLPEVEPQLIKILHDKKKDSLTT 254
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.2
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 278 DAPRA-IDSVLREGDGVQLNIVAATRSGVVHYYQHTLNGSSTKPIKPSLTIQTTTADAKP 336
+A RA +D+ ++E G ++V + G + + + S+ + ++ S TIQ T
Sbjct: 982 EALRAELDAAVQE-KGRSSDLVTSLE-GKIQELETAIESSTAENVQKSKTIQDFTDKVSL 1039
Query: 337 LPLQCCRLQQ-------DGNINLGYLNDRGLVFEKITPDLKTKTQVLIRGDVKEKKKTKQ 389
L Q C L+ D N+N+ L++ E +L T+ K + + ++
Sbjct: 1040 LESQICELKSQNEQMEIDTNLNMDQLSEMSSQLESANAELIELTRTSAETIDKLRGEVEK 1099
Query: 390 NDNSLLRTEFHSSE 403
+ +++ E H +E
Sbjct: 1100 STKAMMDQEEHLAE 1113
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical
protein Y67D8C.5 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 540 QDEQTAVLDYNDSSDEDNDADMEPSQSESGASWDESDE 577
Q+E A D +D DED++ D + E A D+ DE
Sbjct: 2469 QNEHEAEEDDHDREDEDDEDDDDDEDEEEEAEDDDQDE 2506
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 9.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 543 QTAVLDYNDSSDEDNDADMEPSQSESGASWDES--DEQLSDDGDVE 586
+ V ++ D+D D D E ++E S DES DE SD VE
Sbjct: 75 KVVVCSSSEGEDDDGDEDFEMKEAEEHESSDESEADENASDCEVVE 120
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.128 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,790
Number of Sequences: 27539
Number of extensions: 617387
Number of successful extensions: 2665
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2456
Number of HSP's gapped (non-prelim): 213
length of query: 591
length of database: 12,573,161
effective HSP length: 85
effective length of query: 506
effective length of database: 10,232,346
effective search space: 5177567076
effective search space used: 5177567076
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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