Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000153-TA|BGIBMGA000153-PA|undefined
(310 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 30 0.37
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.64
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 29 0.84
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 28 1.9
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 1.9
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 1.9
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 27 4.5
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 27 4.5
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 26 5.9
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 26 5.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 7.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 7.9
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 7.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 7.9
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 30.3 bits (65), Expect = 0.37
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 6/147 (4%)
Query: 19 EEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEE 78
E ED Q L L N A+ V VS + T K +T + SSV +
Sbjct: 174 ESEDEQPLRTLSIEMAAKNALKEAKRENAKVPKDVSKKEAKTTKS-KEKATKKTSSSVPK 232
Query: 79 AHIDDESLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTK 138
+S E +K V ET T PP+ P + PA P+ P K
Sbjct: 233 -----QSTGENTKKAVKLETPLTSTPPIPPLSEPKHSPATVNEHISPPSALTNPSTEELK 287
Query: 139 AIDATVIDKTNHKNALVPDRKTAPIAS 165
+ ID+ N P ++ + + S
Sbjct: 288 PSTSLPIDQGNASVVSKPTQQVSIVLS 314
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 29.5 bits (63), Expect = 0.64
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 8 SRPQTATRNKEEEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSN 67
+R + R K EE + + +S N S S + V+ + + E ++ +N
Sbjct: 532 ARSRERARKKAEEIKISSSKM-NSSPTITNERSSNVESSKKVEAIYTKEPQSI-----TN 585
Query: 68 STDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPKP--QRDEGPAVEKLISIT 125
S + L S+ E ID S + D P+ W + IPPV P D+ ++ L +
Sbjct: 586 SPEGLHSNQETTEIDPSSPRD-DSTPLSWRSHSHPIPPVQVSPLFTSDKNDPLQ-LNPQS 643
Query: 126 PTTPKPPENALTKAIDATVI 145
+ P++ +++ID ++
Sbjct: 644 DDSTSSPKHGKSRSIDEVIL 663
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 29.1 bits (62), Expect = 0.84
Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 16/208 (7%)
Query: 73 LSSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVE------KLISITP 126
L S++E + S++ + P V +++ P +P + P + +
Sbjct: 635 LPSLDETISREMSIASSEALPQVEKSNSDQPPVAIPSTSKTGSPWAKVSDVSTSMAQEIQ 694
Query: 127 TTPKPPENALTKAIDATVIDKTNHKNALVPDRKTAPIASPDPPRINAWSQDXXXXXXXXX 186
K EN +K V + + A P + I P INAW+
Sbjct: 695 RMEKQNENLKSKVASNPVSQTSTNAKASTPALASGSIWG-SPSVINAWANKPAALKSPLI 753
Query: 187 XXXXDAAKLEQN-----LNALKKNSGSVNLNTMNILPPYINVVTPNKLS--ESKTIQIDP 239
A+L QN + S ++N NT P NV N S E+ T + +
Sbjct: 754 KKNIQQAELAQNKQQSSVTTASPRSNALNANTPKAAAPSSNVTMKNVTSILETSTFEGED 813
Query: 240 KKAVIDDSLTTKTKLKQSNSAASLLNGP 267
+V+ K +QS SA P
Sbjct: 814 TWSVVGPG--GKIVNQQSPSAQQTTRSP 839
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 16 NKEEEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSS 75
N E+E++++ + R Q+Y NIP+ E + + +N K D S
Sbjct: 453 NDEDEDEIEQDEIERVLQKYDNIPLLNEEQ--------ALKEKNVEKDFIQWKDDYYRSK 504
Query: 76 VEEAHIDDESLSEVDEKPV 94
V ++ D+E+L + E+ V
Sbjct: 505 VGFSYYDEEALKAMAERYV 523
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.9 bits (59), Expect = 1.9
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 20/179 (11%)
Query: 93 PVVWETSFTVIPPVLPK--PQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNH 150
PV F V+ P+ P PA + +PT+ P+++ + I +DK +
Sbjct: 421 PVTKSAPFPVVSPLQLNHTPGFPTSPAAKPN---SPTSTFFPQSSFGQTIAKNTMDKPSA 477
Query: 151 KNALVPDRKTAPIASPDPPRINAWSQDXXXXXXXXXXXXXDAAKLEQNLNALKKNSGSVN 210
VP + API P++ + Q + KLE L+ +KK++ +
Sbjct: 478 VRTSVPSQLAAPI-----PQVASAEQ---------LKLAAEVPKLESQLSQVKKSNDDLQ 523
Query: 211 LNTMNILPPYINV-VTPNKLSESKTIQIDPKKAVIDDSLTTKTKLKQSNSAASLLNGPM 268
++ ++ +V +++ ++ ++ K + D T K + +Q N S+L +
Sbjct: 524 KSSRDVAANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATL 582
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 222 NVVTPNKLSESKTIQIDPKKAVIDDSLTTKTKLKQSNSAASLLN 265
N ++P KLS T IDP+ D+S+ + + S + LN
Sbjct: 199 NSLSPTKLSFLSTSNIDPEDLTEDNSILPVSPTRDSTKSHKTLN 242
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 43 EP-SVRHVDVVVSAETRNTNKF-LPSNSTDR 71
EP ++RH+D +V NKF +PS+S +R
Sbjct: 255 EPDNIRHIDWLVKRSIERANKFQIPSSSINR 285
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 7 HSRPQTATRNKEEEEDLQYLPLLRASQEY 35
HS P T KEE + QY P+ + +Y
Sbjct: 209 HSSPHDETVKKEENDKDQYPPMTKEQHKY 237
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 26.2 bits (55), Expect = 5.9
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Query: 74 SSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPKPQRD-EGPAVEKLISITPTTPKPP 132
S + EA+ ++ + ++ S KP D P + LI + T P
Sbjct: 173 SKLREAYEEEMAAYNASKENASVADSRVTAEETSTKPSEDLSSPTKKDLIDFSETRPLAQ 232
Query: 133 ENALTKAIDATVIDKTN--HKNALVPDRKTAPIASPDP 168
+ T I K H + VP P++ P P
Sbjct: 233 ASRATPDIKEQHAKKPKRKHTRSTVPTSNVEPVSQPQP 270
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 212 NTMNILPPYINVVTPNKLSESKTIQIDPKKAVIDDSLTTKTKLKQSNSAA-SLLNGPM 268
N +NIL + + ++ + + + PK + +D+S KTKL NS++ L P+
Sbjct: 395 NVLNILSKVAHEIPLSEAVVIRIVYLFPKVSTLDNSF--KTKLPNCNSSSFDFLKAPL 450
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 83 DESLSEVDEKPVVWETSFTVIPPVLPKPQRDEG 115
++ EVDE+PV T+ ++PP +P R G
Sbjct: 299 EKGQKEVDEEPVSEPTTSPILPPKNQEPIRMGG 331
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 192 AAKLEQNLNALKKNSGSVNLNTMNILPPYINVVTPNKLSES 232
+A L++ LN+ K + NLN+ + P +TP+ ++ S
Sbjct: 327 SAVLKEGLNSTVKKTFFDNLNSEKVCPSVSPFLTPDNIASS 367
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 7.9
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 18 EEEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTN---------KFLPSNS 68
E+E + + + + NI +A H+ SA RN N F S+S
Sbjct: 42 EKESNASSIIISQQPLSPSNISSAAPLDETHIATKASASLRNNNVSPHIPSPSSFSSSSS 101
Query: 69 TDRLLSSVEEAHIDDESLSEV 89
+D S ++E H D E ++ V
Sbjct: 102 SDLDKSMLDEKHPDSEDITAV 122
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 14 TRNKEEEEDLQYLPLLRASQEYGNI--PISAEPSVRHVDVVVSAETRNTNKFLP-SNSTD 70
+ NKEEEED+ + Q + I P++++ ++ VD+ +++ N + SN D
Sbjct: 326 SENKEEEEDMMLTRPIEIPQHFSPIARPLTSQEAI--VDMDITSNNINLSPVSHFSNGLD 383
Query: 71 RLLSSVEEA 79
L ++EEA
Sbjct: 384 --LQNLEEA 390
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.125 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,398,190
Number of Sequences: 5004
Number of extensions: 58948
Number of successful extensions: 169
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 159
Number of HSP's gapped (non-prelim): 20
length of query: 310
length of database: 2,362,478
effective HSP length: 73
effective length of query: 237
effective length of database: 1,997,186
effective search space: 473333082
effective search space used: 473333082
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 54 (25.8 bits)
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