Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000153-TA|BGIBMGA000153-PA|undefined
(310 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 36 0.032
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 35 0.097
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.30
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 32 0.52
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 31 0.91
SB_24975| Best HMM Match : ET (HMM E-Value=1) 31 1.2
SB_33310| Best HMM Match : DUF316 (HMM E-Value=5.5) 31 1.6
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 31 1.6
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 31 1.6
SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32) 31 1.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.8
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.8
SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 2.8
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 3.7
SB_36954| Best HMM Match : PH (HMM E-Value=1.2e-22) 29 3.7
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_27517| Best HMM Match : TolA (HMM E-Value=0.25) 29 3.7
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 29 4.8
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 4.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 29 6.4
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 6.4
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_7958| Best HMM Match : NCD3G (HMM E-Value=2.9) 29 6.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 6.4
SB_29249| Best HMM Match : DUF1165 (HMM E-Value=2.4) 29 6.4
SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05) 28 8.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 8.5
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_13389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_10447| Best HMM Match : Dor1 (HMM E-Value=3.3) 28 8.5
SB_10195| Best HMM Match : CXC (HMM E-Value=0.003) 28 8.5
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 8.5
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 36.3 bits (80), Expect = 0.032
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 3 QLGVHSRPQTATRNKEEEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETR---N 59
Q+ P T T N++ + Q P R+ EY P S+ + D ++S R +
Sbjct: 1332 QVSTDDDPDTQTENRDNVFEEQASPKFRSDNEYS--PPSSPKMMFKSDQMLSKAFREVVS 1389
Query: 60 TNKFLPSNSTDRLLSSVEEAH-IDDESLSEVDEKPVVWETSFTVIPPVLPK 109
+ LP + L S+++ + LSE++E+ +W+ SFT P+
Sbjct: 1390 SPGVLPEATKKLLFSTIDPIYDFHCAFLSELEERMTLWDQSFTTSTGTEPR 1440
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 34.7 bits (76), Expect = 0.097
Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 8/189 (4%)
Query: 75 SVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPEN 134
SVE A+ D +L ++ +P + T P P + P + + + TPTT K
Sbjct: 356 SVERAYRSDFALDDIKIEPC--KRPPTKAKPPTTTPSKATAPISDPMTTTTPTTTKATTP 413
Query: 135 ALTKAIDATVIDKTNHKNALVPDRKTAPIASPDPPRINAWSQDXXXXXXXXXXXXXDAAK 194
TKA +T N + +KT S A A
Sbjct: 414 TTTKATAST--QTAAEANTFLSTQKTDATTSQSTSTTEATKSQTTKATTTLSTSTTKAT- 470
Query: 195 LEQNLNALKKNSGSVNLNTMNILPPYINVVTPNKLSESKTIQIDPKKAVIDDSLTTKTKL 254
++ + L+T + K + S ++ A + + T T+
Sbjct: 471 ---TTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEATTSPAATETAPPTTTES 527
Query: 255 KQSNSAASL 263
+ +N A ++
Sbjct: 528 RSTNKATTI 536
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 65 PSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVL---PKPQRDEGPAVEKL 121
P T+ S EE + +D+ + D+K ET IP + P+P +D G ++
Sbjct: 689 PQGKTESANPSEEEHNKEDKPQEKDDDKSEE-ETDDESIPEAMDTTPEPGKDFGTQTDRA 747
Query: 122 ISITPTTPKPPENALTKAIDATVIDK--TNHKNALVPDRKTA 161
T ++ T I ATVI K T H N V KTA
Sbjct: 748 KPTTLHVGTSSKSGSTPTIQATVIAKGQTAHTNQQVLVAKTA 789
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 33.1 bits (72), Expect = 0.30
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 39 PISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWET 98
P + P RH+ S+E + T +F + S D V+ I E + VD + + E
Sbjct: 3186 PTTEFPVFRHL---YSSEVKQTEEFELALSDDEPAVDVDAQTI--EPIDSVDARAI--EQ 3238
Query: 99 SFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNHKNALVPDR 158
++ P + +GPA+E S+ T KP N + + VI +T +
Sbjct: 3239 IASLDDPTIEPTVGVDGPAIEPTFSVNAPTIKPVFNEDLPVLQSAVI-RTPEPEI----Q 3293
Query: 159 KTAPIASPDPP 169
+TAP+ SP P
Sbjct: 3294 RTAPV-SPQTP 3303
Score = 31.5 bits (68), Expect = 0.91
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 39 PISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWET 98
P + P RH+ S+E + T F + S D V+ I E + VD + + E
Sbjct: 3606 PTTEFPVFRHL---YSSEVKQTEDFELALSDDEPAVDVDAQTI--EPIDSVDARAI--EQ 3658
Query: 99 SFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNHKNALVPDR 158
++ P + +GPA+E S+ T KP N + + VI + +
Sbjct: 3659 IASLDDPTIEPTVGVDGPAIEPTFSVNAPTIKPVFNEDLPVLQSAVIRPPEPE-----IQ 3713
Query: 159 KTAPIASPDPP 169
+TAP+ SP P
Sbjct: 3714 RTAPV-SPQTP 3723
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 44 PSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVI 103
P RH+ S+E + T F + S D V+ I E + VD + + E ++
Sbjct: 3401 PVFRHL---YSSEVKQTEDFELALSDDEPAVDVDAQTI--EPIDSVDARAI--EQIASLD 3453
Query: 104 PPVLPKPQRDEGPAVEKLISITPTTPKPPEN 134
P + +GPAVE S+ T KP N
Sbjct: 3454 DPTIEPTVGVDGPAVEPTFSVNAPTIKPVFN 3484
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 44 PSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVI 103
P RH+ S+E + T F + S D V+ I E + VD + + E ++
Sbjct: 3821 PVFRHL---YSSEVKQTEDFELALSDDEPAVDVDAQTI--EPIDSVDARAI--EPIASLD 3873
Query: 104 PPVLPKPQRDEGPAVEKLISITPTTPKPPEN 134
P + +GPAVE S+ T KP N
Sbjct: 3874 DPTIEPTVGVDGPAVEPTFSVNAPTIKPVFN 3904
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 32.3 bits (70), Expect = 0.52
Identities = 42/169 (24%), Positives = 64/169 (37%), Gaps = 7/169 (4%)
Query: 97 ETSFTVIPPVLPKPQRDEGPAVEKLISI--TPTTPKPPENALTKAIDATVIDKTNHKNAL 154
+TS P + PK R + S+ + TT KP +NA K D DK K
Sbjct: 10 KTSPETSPEISPKTGRKTDRKTSRKTSLKRSLTTNKPEDNADEKPEDNPE-DKPEDKTED 68
Query: 155 VPDRKTAPIASPDPPRINAWSQDXXXXXXXXXXXXXDAAKLEQNLNALKKNSGSVNLNTM 214
P+ K D P+ N ++ + K +LNA +K S +L
Sbjct: 69 RPEDKPEDKLE-DKPKENQQNKPEDKQQTTPKTSRKTSQKT--SLNASRKTSRKTSLKRS 125
Query: 215 NILPPYINVVTPNKLSESKTIQIDPKKAVIDDSLTT-KTKLKQSNSAAS 262
P ++ T K K+ PK++ S ++ KT K S +S
Sbjct: 126 LKTSPKTSLKTSRKTDRKKSRNTSPKRSPKTSSKSSPKTSPKTSLKTSS 174
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 31.5 bits (68), Expect = 0.91
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 29 LRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDD--ESL 86
LR + EY ++P +A+ V E R + S + D L+ + E I D ++
Sbjct: 715 LRPAAEYKHLPNNADRDVFE-------EMRAAKE---SGTLDSLIEAAENMRIADLPDTA 764
Query: 87 SEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVID 146
+E++ P TVI P KP E A T P PPE A V D
Sbjct: 765 NEIEHAPPT-----TVINPPQAKPAEPEPLAPRPSSPQTQPAPAPPEPAAAPTSSNDVPD 819
Query: 147 KTNHKNALV 155
+ K+ V
Sbjct: 820 SSKEKDEKV 828
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 85 SLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDAT 143
S+S P+ S T V P +V +S+TP TP+ P ++T ++ T
Sbjct: 102 SVSVTPNTPLSPSASVTASVSVTPNTPLSLSASVTASVSVTPNTPQSPSASVTASVSVT 160
>SB_33310| Best HMM Match : DUF316 (HMM E-Value=5.5)
Length = 353
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 38 IPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVE-----EAHIDDESLSEVDEK 92
+P+ VRH + V AE R+ N +++ RL+SSV+ E + + S++D +
Sbjct: 267 LPVVFGKLVRHESMPVMAEDRSANHRRANSARSRLVSSVKVRDEREKPVLSRARSQLDLR 326
Query: 93 PVVWE 97
P W+
Sbjct: 327 PKDWD 331
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 30.7 bits (66), Expect = 1.6
Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 15/227 (6%)
Query: 52 VVSAETRNTNKFLPSNST--DRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPK 109
V S + TNK P ST ++ + V +D S D V +TS + V PK
Sbjct: 1848 VASKSSTATNKVTPKVSTVAAKVRAKVSTDAVDVTSKPSTDAAKVTPKTSTDAVK-VTPK 1906
Query: 110 PQRDEGPAVEKLIS-ITPTTPKPPENALTKAIDATVIDKTNHKNALVPDRKTAPIASPDP 168
D K + TPK +A A+ A + K P AS D
Sbjct: 1907 ASNDSAKVTSKTSTDAAKVTPKASTDAAKVTPKASTDAVKVTPKASIGAAKAIPKASTDA 1966
Query: 169 PRINAWSQDXXXXXXXXXXXXXDAAKLEQNLNALKKNSGSVNLNTMNILPPYINVVTPNK 228
+ ++ +L+ + + S+N++T+ + + + K
Sbjct: 1967 ANSRTTA---AKTKSISPKVSSESTQLKSKSSMDVSQNKSLNVSTVEVYSMSESAIETVK 2023
Query: 229 --------LSESKTIQIDPKKAVIDDSLTTKTKLKQSNSAASLLNGP 267
+ SK++ D + + T+KT LK S + GP
Sbjct: 2024 GDRQSNELIKSSKSVSKDNARVISSVEKTSKTSLKSSINIMVSNKGP 2070
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 30.7 bits (66), Expect = 1.6
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 14/157 (8%)
Query: 21 EDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAH 80
E+LQ P+ + N PIS E + S ++T F S + SSV + +
Sbjct: 161 EELQ--PIRPSLTAANNSPISIEGAFFAKLSATSYSGQSTTSF----SMVYVSSSVRDMY 214
Query: 81 IDDESLSEVDEKPVVWETSFTVIPPVLP-KPQRDEGPAVEKLISITPTTPKPPENALTKA 139
+ +SL +D P ++ T P+ KP P TP P P + TK
Sbjct: 215 LSYDSLLNLDLLPHCYQALMTSQRPLTSDKPSHKIKPG-----PTTPRQPPMPLASSTKD 269
Query: 140 IDATVIDKTNHKNALVPDRKTAPI-ASP-DPPRINAW 174
+ ++ T+H+ P P +P + +I AW
Sbjct: 270 VPNLPLNMTSHRETTPPRPSELPFPCTPANNTKIKAW 306
>SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32)
Length = 773
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 35 YGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLL 73
+G +P+ +P VR ++VVV + + +F+ SN+ +L
Sbjct: 547 FGPLPLPLDPDVRIMEVVVGTQEESLVQFIESNAVAEVL 585
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 99 SFTVIPPVLPKPQRDEGPAVEKLISITPTTPKP 131
SFT P LP P RD+ PA ++ TP P P
Sbjct: 292 SFTTQGPPLP-PSRDQAPAPPPPLNATPPPPPP 323
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 99 SFTVIPPVLPKPQRDEGPAVEKLISITPTTPKP 131
SFT P LP P RD+ PA ++ TP P P
Sbjct: 204 SFTTQGPPLP-PSRDQAPAPPPPLNATPPPPPP 235
>SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 108 PKPQRDEGPAVEKLIS-ITPTTPKPPENALTKAIDATVIDKTNHKNALVPDRK 159
P PQR P++ + +S TPT P+ PE A K T + + N +N + D K
Sbjct: 450 PPPQRK--PSLPRPLSQSTPTIPEEPETAPPKPNTTTPLTRGNRENQPLLDPK 500
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 56 ETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVI 103
E +N + R +S+ DDE LS V ++ V WE+S+ +
Sbjct: 455 EKKNEGLIRELETNKRFVSTALNNSTDDEELSSVRDQVVEWESSYLAV 502
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 29.5 bits (63), Expect = 3.7
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 21 EDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAH 80
E+LQ P+ + N PIS E + S ++T F S + SSV + +
Sbjct: 430 EELQ--PIRPSLTAANNSPISIEGAFFAKLSATSYSGQSTTSF----SMVYVSSSVRDMY 483
Query: 81 IDDESLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAI 140
+ +SL +D V T P+ D+ P K TP P P + TK +
Sbjct: 484 LSYDSLLNLDPCRTVSHALMTSQRPLTS----DDPPHKIKPAPTTPRQPPMPLASSTKDV 539
Query: 141 DATVIDKTNHKNALVPDRKTAPI-ASP-DPPRINAW 174
++ T+H+ P P +P + ++ AW
Sbjct: 540 PNLPLNMTSHRETTPPRPSELPFPCTPANNTKMKAW 575
>SB_36954| Best HMM Match : PH (HMM E-Value=1.2e-22)
Length = 501
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 103 IPP-VLPKPQRDEGPAVEKLISITPTT----PKPPEN-ALTKAIDATVIDKTNHKNALVP 156
IPP P P+ D PAV++ S+ P T KPP N L ++D +V + ++N L P
Sbjct: 308 IPPGFTPTPKADTAPAVDR--SVKPPTVDRLTKPPVNRTLKPSMDMSVPNVHPYEN-LGP 364
Query: 157 DR 158
DR
Sbjct: 365 DR 366
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/76 (25%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Query: 93 PVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNHKN 152
P+ S T P+ P P + S TP P P + + T I +
Sbjct: 1263 PIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTPIKPSPSTT 1322
Query: 153 ALVPDRKTAPIASPDP 168
+ P T PI P P
Sbjct: 1323 PIKPSPSTTPI-KPSP 1337
>SB_27517| Best HMM Match : TolA (HMM E-Value=0.25)
Length = 492
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 41 SAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEK 92
S E S + + + ++ N FLP + T+ L SS ++ S + +DEK
Sbjct: 359 SEEESFPELARMETRSVQSVNNFLPRDVTENLTSSWDDRPFTGRSTASIDEK 410
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 31 ASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVD 90
A + G AE SV+ VSAE+ N +KF+ RL S + E +E D
Sbjct: 1112 AGEPEGEPEHRAEDSVKRELTSVSAESLNGHKFVKGKPEPRLASVAGVPEEELELATEKD 1171
Query: 91 EK 92
EK
Sbjct: 1172 EK 1173
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 54 SAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFTVIPPVLPKPQRD 113
S +R+++ +S S + A + E E V + S V LP D
Sbjct: 1037 SGSSRSSSSSSSGSSASSSSSGNDAAKVKKEVKEAKGESKEVVKESKEVKNKALP----D 1092
Query: 114 EGPAVEKLISITPTTPKPPENALTKAI 140
PAV+ S PT P+P +L+K++
Sbjct: 1093 SKPAVKSSPSPPPTKPRPSRRSLSKSV 1119
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Query: 64 LPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSFT----VIPPVLPKPQRDEGP--A 117
+P +TD ++V ++ + V E V ET+ T V P P+ P
Sbjct: 3369 VPPETTDAPETTVAPETTEEPETTVVPETTAVPETTITQETTVAPETTALPESTVAPEST 3428
Query: 118 VEKLISITPTTPKPPENAL----TKAIDATVIDKTN--HKNALVPDRKTAPIASPDP 168
V + ++ P T PE + T ++TV +T + ++P+ AP + +P
Sbjct: 3429 VASMTTVLPETTVVPETTVVPGTTPTPESTVAPETTVAPETTVIPETTVAPETTDEP 3485
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 87 SEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVID 146
+E E VV ET+ T V P+ + + ++ P TP PE T A + TV
Sbjct: 3642 TETPETTVVSETTVTPETTVAPETTAEPDTTLTPDTTVAPETPMAPET--TVAPETTVTP 3699
Query: 147 KT 148
+T
Sbjct: 3700 ET 3701
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 85 SLSEVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEK 120
S ++ EK +T +++ P L KP +GP+V+K
Sbjct: 441 SQTDTSEKSAAAKTQDSLVKPGLKKPSLQDGPSVDK 476
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 96 WETSFTVIPPVL--PKPQRDEGPAVEKLISITPTTPKPPEN 134
+ T FT+I P + PKP + + A+E+ +S+ PP++
Sbjct: 502 YHTPFTIIVPEIEPPKPYKKQKSALERQLSVFLAALSPPKD 542
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 9 RPQTATRNKEEEEDLQYLPLLRASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNS 68
+P+ + E + L PL+ + +P+SAE +V ++ VSA+ K L
Sbjct: 5888 KPKKEKPTEREAKPLDKKPLVEEKE----LPVSAEKAVEEKELPVSAKKAVEEKPLEKPI 5943
Query: 69 TDRLLSSVEEAHIDDESLSEVDEKP 93
T R VEE E +E + KP
Sbjct: 5944 T-REEKKVEELKPKKEKATEREAKP 5967
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 108 PKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNHKNALVPDRKTAPIA 164
P+ R + PA+EK TP+ PKP + +T+ T K A P K P A
Sbjct: 1038 PRSIRGKKPALEK----TPSEPKPKKARVTRETQVKTTRSTRSK-AAAPKSKKKPSA 1089
>SB_7958| Best HMM Match : NCD3G (HMM E-Value=2.9)
Length = 257
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 53 VSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVV 95
+S R T P D L++ EE +DDE E+DE P V
Sbjct: 175 ISTRRRGTVNLDPEQPDD--LTAEEEDDMDDEGFLEMDEDPTV 215
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 98 TSFTVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDAT 143
TS+T P P P P+ S TPTT P + T T
Sbjct: 108 TSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTSYT 153
>SB_29249| Best HMM Match : DUF1165 (HMM E-Value=2.4)
Length = 424
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 102 VIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVID 146
VI P P + EGP P +PPE+ + DAT D
Sbjct: 200 VIDEYAPCPSQSEGPQANYHQGEEPPVARPPESQEQPSSDATTAD 244
>SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05)
Length = 1442
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 14 TRNKEEEEDLQYLPLLRASQEYGNIPISAE--PSVRHVDVVVSAETRNTNKFLPSNSTDR 71
T K ++ ++ P L + + NI + PS H+++ A N+ FLP+ +
Sbjct: 887 TMAKSQKAPIRLHPRLTITTDPVNIQFNTRTCPSGYHIELFTKALANNSVCFLPTGADKT 946
Query: 72 LLSSVEEAHI 81
L++++ AH+
Sbjct: 947 LVAALIIAHL 956
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
Query: 41 SAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVDEKPVVWETSF 100
SAE +V V T + L +T S+V + + + +V +T+
Sbjct: 325 SAETTVAPETTAVPDTTLVPDTTLAPQTTVAPESTVAPENTSAPETTAAPDTTLVSDTTL 384
Query: 101 TVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTN--HKNALVPDR 158
V P+ V ++ P T PPE T A + TV +T + ++P+
Sbjct: 385 APETTVAPESTVAPETTVAPETTVAPETTMPPET--TMAPETTVAAETTAAPETTVIPET 442
Query: 159 KTAPIASPDP 168
AP S P
Sbjct: 443 TAAPETSATP 452
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 88 EVDEKPVVWETSFTVIPPVLPKPQRDEGPAVEKLISITPT-TPKPP-ENALTKAIDATVI 145
++ KP F PP P A++ IS PT PKP + K I T
Sbjct: 194 QLTPKPSPPSKPFKPSPPPKPSIAPKPSLAIKPAISPKPTLKPKPSLQEIKQKEIRVTNS 253
Query: 146 DKTNHKNALVPDRKTAPIASPDPPRIN 172
DK +++ L P+ T P PP N
Sbjct: 254 DKESNQTVLDPETTT---EKPCPPPRN 277
>SB_13389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/62 (33%), Positives = 27/62 (43%)
Query: 31 ASQEYGNIPISAEPSVRHVDVVVSAETRNTNKFLPSNSTDRLLSSVEEAHIDDESLSEVD 90
A + G AE SV+ VSAE+ N +KF+ RL S + E E D
Sbjct: 92 AGEPEGEPEHRAEDSVKRELTSVSAESLNGHKFVKGKPEPRLASVAGVPEEELEFAPEKD 151
Query: 91 EK 92
EK
Sbjct: 152 EK 153
>SB_10447| Best HMM Match : Dor1 (HMM E-Value=3.3)
Length = 466
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 25 YLPLLRASQEYGNIPISAEPSVRHVDVVVSAET-----RNTNKFLPSNSTDRLLSS 75
YLP L +S GNI A S ++D S T RN N FL S +++S
Sbjct: 319 YLPALTSSCGMGNICKDASESGVNIDAAESCTTESDIQRNRNDFLMPASVSEIMAS 374
>SB_10195| Best HMM Match : CXC (HMM E-Value=0.003)
Length = 1365
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 58 RNTNKFLPSNSTDRLLSSVEE-AHIDDESLSEVDEKPVVWETSFTVIP 104
+ K + + D+++ E+ +H+ +S E+D K V E F V+P
Sbjct: 898 KRATKIIIVKANDKVIELKEDRSHVPAKSRPEIDMKEAVGEFEFNVVP 945
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 101 TVIPPVLPKPQRDEGPAVEKLISITPTTPKPPENALTKAIDATVIDKTNH-KNALVPDRK 159
TV+P P P E SIT T KPP + L T++ +T +P+
Sbjct: 1131 TVVPKPTVTPSTTISPKTET--SITEAT-KPPVDQLKTKQPTTILGETTIVPETTIPEST 1187
Query: 160 TAPIASPDPPRI 171
AP+ + P I
Sbjct: 1188 AAPVETTITPEI 1199
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.307 0.125 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,140,585
Number of Sequences: 59808
Number of extensions: 415354
Number of successful extensions: 1261
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1217
Number of HSP's gapped (non-prelim): 72
length of query: 310
length of database: 16,821,457
effective HSP length: 82
effective length of query: 228
effective length of database: 11,917,201
effective search space: 2717121828
effective search space used: 2717121828
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -