Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000151-TA|BGIBMGA000151-PA|undefined
(214 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84) 32 0.41
SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13) 30 1.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 29 2.9
SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9) 29 3.8
SB_39168| Best HMM Match : Cgr1 (HMM E-Value=0.79) 28 5.1
SB_14968| Best HMM Match : IL3 (HMM E-Value=8.6) 28 5.1
SB_10377| Best HMM Match : Vicilin_N (HMM E-Value=8.9) 28 6.7
SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48) 28 6.7
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 6.7
SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5) 27 8.9
SB_5969| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 60 NNTEERRQSRRKNKDNLNKILQMNRRHDDMLND-NEGIP--INQRTAPDNDTTLTDKIKI 116
N EE R+ RK + + KIL N + D+LN+ N GI +N+ T D+D + K++
Sbjct: 1945 NEIEEMREKMRKANEEIEKILSKNSKLSDILNELNSGIENILNEETLSDSDPNV--KLQK 2002
Query: 117 LR 118
LR
Sbjct: 2003 LR 2004
>SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84)
Length = 649
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 144 ETSNASMDLCTWQWNSTVSRHGLGFSVITPDDLVNVNSTTKGMRFS-GPSEDADRNPKG 201
E S + + + NS+VS + + DD VNS K F+ PSE+ RN +G
Sbjct: 405 EVSGEQNSILSPRKNSSVSNERTNYQELAADDKDTVNSPAKNGSFTLSPSENGQRNLQG 463
>SB_15458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 63 EERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKIK 115
EE +++ KD +++L ++ ++ +++ DNEG+ R + + T ++K
Sbjct: 363 EELNKAKASLKDKQDQLLALDTKYKELIADNEGLKDQMRGLRETANSATQELK 415
>SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13)
Length = 725
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 37 DQKLRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLN-KILQMNRRHDDMLNDNEG 95
++KL++ ++ L +++N+ ER+ K +LN +I++M DD+ N +
Sbjct: 621 NKKLKAQKNDENEEQTQLLQSILNDANERKDQLEKENRSLNQRIMEMESEVDDLRNQQKA 680
Query: 96 IPINQRTAPD 105
+Q + D
Sbjct: 681 HASDQDSELD 690
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 54 KLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDT 108
++TAL N TEE ++ K+ L+K+ + H D L + + + + A D T
Sbjct: 495 RVTALENQTEEDAVEKKSLKNQLDKVNKRVTEHQDELMNLDQSLVEHKIAVDAHT 549
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 60 NNTEERRQSRRKNKDNLNKILQMNRRHD-DMLNDNEGIPINQRTAPDNDTT 109
NNT + + S KN + N N+ D + +DN N T+ +N+T+
Sbjct: 97 NNTSDNKNSDNKNISDNNNTSDNNKTSDNNKTSDNNNTSDNNNTSDNNNTS 147
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 61 NTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTT 109
N++ S KN DN N N ++ +DN N T+ +N+T+
Sbjct: 93 NSDNNNTSDNKNSDNKNISDNNNTSDNNKTSDNNKTSDNNNTSDNNNTS 141
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 41 RSASPARSQGSFHKLTALMNNTEERRQ-SRRKNKDNLNKILQMNRRHDDMLNDNEGIPIN 99
++ + S+ H T +N+ ++ S KN DN N D+ +DN+ I N
Sbjct: 61 KNCTIGNSKMDHHNQTITINDRSDKNNTSDNKNSDN-------NNTSDNKNSDNKNISDN 113
Query: 100 QRTAPDNDTTLTDK 113
T+ +N T+ +K
Sbjct: 114 NNTSDNNKTSDNNK 127
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 60 NNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKI 114
NN + S N + N I+ N ++ +DN N + +N+T+ + I
Sbjct: 202 NNNSDNNNSDNNNISDNNNIIDNNNSDNNNTSDNNNTSDNNNISDNNNTSDNNNI 256
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 58 LMNNTEERRQSRR----KNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDK 113
L+ NT + Q+ + K+K+ LN L++ +ML + E IP+N+ N TT+T K
Sbjct: 1200 LIKNTPQTEQALKGLNVKDKE-LNDELEV---FSNMLGELEQIPLNKNNVTPNSTTITQK 1255
Query: 114 IKI 116
+
Sbjct: 1256 TSL 1258
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 13/106 (12%)
Query: 103 APDNDTTLTDKIKILRPLVPMYEPESKYNHVSQA----------SGVFCNFETSNASMDL 152
+P+ND DKI + VP + + N S A V C + S D
Sbjct: 950 SPENDACQPDKITCSKDNVPCSKDDITCNKDSIACSRERVACLNDNVMCLKDNVMCSKDA 1009
Query: 153 CTWQWNSTVSRHGLGFSVITPDDLVNVNSTTKGMRFSGPSEDADRN 198
T Q S +SV+ PD V N T+ + +G ++ +D N
Sbjct: 1010 VTCQNRSVTCPK---YSVLCPDSNVEPNETSVNDKCNGANDSSDDN 1052
>SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9)
Length = 212
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 42 SASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDML 90
S+SP+ S S K T T+E+R R+++K NK L R D +L
Sbjct: 151 SSSPSSSSDS-PKGTLDPKETQEKRVKRKRSKAAANKRLAEGEREDKLL 198
>SB_39168| Best HMM Match : Cgr1 (HMM E-Value=0.79)
Length = 358
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 66 RQSRRKNKDNLNKILQMNR---RHDDMLNDNEGIPINQRT 102
R+ ++KNK+ +++Q R + + D EG P++ RT
Sbjct: 25 RRKKKKNKNKAKQLVQTARNTEKEEQKSGDEEGTPVDDRT 64
>SB_14968| Best HMM Match : IL3 (HMM E-Value=8.6)
Length = 321
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 72 NKDNLNKILQMNRRH-DDMLNDNEGIPINQRTAPDN 106
NKDN+NK +++ H DD+ + N PI + DN
Sbjct: 177 NKDNINKKIRLRLSHLDDVRSANNKAPIIKDFTVDN 212
>SB_10377| Best HMM Match : Vicilin_N (HMM E-Value=8.9)
Length = 181
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 37 DQKLRSASPARSQGSFHKLTALMNNTEERR--QSRRKNKDNLNKILQMNRRH 86
D+KLR S SF K ++ ERR + R+ D+ +K LQ +R H
Sbjct: 3 DEKLRLTSAVVVSKSFLKEQERRDHARERRINRFRQSESDDEDKSLQRDREH 54
>SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48)
Length = 947
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 44 SPARSQGSFHKLTALMNNTEERRQSRRKNKDN-----LNKILQMNRRHDDMLNDNEGIPI 98
+P ++ + ++ TE ++ K KDN +NK++++ D +N+ EG PI
Sbjct: 754 TPIKNNHQSDDIIKVVGVTESHKKKENKKKDNDGADAVNKVIKVIESDDGHVNEEEG-PI 812
Query: 99 NQRTAPDND 107
+ N+
Sbjct: 813 TNHSDDVNE 821
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 46 ARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQR 101
A S G F +L +M NTE+ SRR ++ +I+ + N G P N R
Sbjct: 353 AISTGKFVRLQEIMVNTEQ-NLSRRSSRSEHMRIMSKLQEKPSESRTNGGPPYNAR 407
>SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5)
Length = 561
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 40 LRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNR 84
++SASP S S A N E Q + + DN NK + R
Sbjct: 75 IKSASPTISANSRTATVASFKNVETELQQKDASSDNDNKSISSRR 119
>SB_5969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 40 LRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNR 84
++S SPA S S A N E Q + + DN NK + R
Sbjct: 30 IKSVSPAISANSRTATVASFKNVETELQQKDASSDNDNKSISSRR 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.129 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,485,355
Number of Sequences: 59808
Number of extensions: 280364
Number of successful extensions: 1038
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 33
length of query: 214
length of database: 16,821,457
effective HSP length: 79
effective length of query: 135
effective length of database: 12,096,625
effective search space: 1633044375
effective search space used: 1633044375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -