Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000151-TA|BGIBMGA000151-PA|undefined
         (214 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84971-1|AAB60856.1|  176|Homo sapiens unknown protein.                30   5.3  
BC032844-1|AAH32844.1|  714|Homo sapiens angiogenic factor with ...    30   5.3  
AY500996-1|AAR97617.1|  714|Homo sapiens angiogenic factor VG5Q ...    30   5.3  
AY500994-1|AAR97615.1|  714|Homo sapiens angiogenic factor VG5Q ...    30   5.3  
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.                  30   7.0  
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.      30   7.0  
BC075011-1|AAH75011.1|  555|Homo sapiens acyl-CoA thioesterase 1...    29   9.2  
BC075010-1|AAH75010.1|  555|Homo sapiens acyl-CoA thioesterase 1...    29   9.2  
AB078619-1|BAB84022.1|  555|Homo sapiens cytosolic acetyl-CoA hy...    29   9.2  

>U84971-1|AAB60856.1|  176|Homo sapiens unknown protein.
          Length = 176

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 53 HKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNE 94
          H    L  N E   Q  R   + L+KILQ  R  D+  +D E
Sbjct: 51 HHTERLYQNAESNNQELRTQVEELSKILQRGRNEDNKKSDVE 92


>BC032844-1|AAH32844.1|  714|Homo sapiens angiogenic factor with G
          patch and FHA domains 1 protein.
          Length = 714

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 53 HKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNE 94
          H    L  N E   Q  R   + L+KILQ  R  D+  +D E
Sbjct: 51 HHTERLYQNAESNNQELRTQVEELSKILQRGRNEDNKKSDVE 92


>AY500996-1|AAR97617.1|  714|Homo sapiens angiogenic factor VG5Q
          protein.
          Length = 714

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 53 HKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNE 94
          H    L  N E   Q  R   + L+KILQ  R  D+  +D E
Sbjct: 51 HHTERLYQNAESNNQELRTQVEELSKILQRGRNEDNKKSDVE 92


>AY500994-1|AAR97615.1|  714|Homo sapiens angiogenic factor VG5Q
          protein.
          Length = 714

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 53 HKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNE 94
          H    L  N E   Q  R   + L+KILQ  R  D+  +D E
Sbjct: 51 HHTERLYQNAESNNQELRTQVEELSKILQRGRNEDNKKSDVE 92


>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
          Length = 1275

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 40  LRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPIN 99
           L +   A  Q   H L  +       +Q R++ +D   +I ++      +L DNE I   
Sbjct: 132 LATEHEALMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKAEITSLLKDNERIQST 191

Query: 100 QRTAPDNDTTLTDKIK 115
           Q  AP+++ +   KIK
Sbjct: 192 QTVAPNDEDSDIKKIK 207


>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
          Length = 1181

 Score = 29.9 bits (64), Expect = 7.0
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 40  LRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPIN 99
           L +   A  Q   H L  +       +Q R++ +D   +I ++      +L DNE I   
Sbjct: 132 LATEHEALMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKAEITSLLKDNERIQST 191

Query: 100 QRTAPDNDTTLTDKIK 115
           Q  AP+++ +   KIK
Sbjct: 192 QTVAPNDEDSDIKKIK 207


>BC075011-1|AAH75011.1|  555|Homo sapiens acyl-CoA thioesterase 12
           protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 60  NNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQR 101
           N   ERR+ R +++D  N +++ + + DD++ D E   ++ R
Sbjct: 138 NLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTR 179


>BC075010-1|AAH75010.1|  555|Homo sapiens acyl-CoA thioesterase 12
           protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 60  NNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQR 101
           N   ERR+ R +++D  N +++ + + DD++ D E   ++ R
Sbjct: 138 NLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTR 179


>AB078619-1|BAB84022.1|  555|Homo sapiens cytosolic acetyl-CoA
           hydrolase protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 60  NNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQR 101
           N   ERR+ R +++D  N +++ + + DD++ D E   ++ R
Sbjct: 138 NLAAERRKVRLQHEDTFNNLMKESSKFDDLIFDEEEGAVSTR 179


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.129    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,456,280
Number of Sequences: 224733
Number of extensions: 1073354
Number of successful extensions: 2558
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2549
Number of HSP's gapped (non-prelim): 9
length of query: 214
length of database: 73,234,838
effective HSP length: 87
effective length of query: 127
effective length of database: 53,683,067
effective search space: 6817749509
effective search space used: 6817749509
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)