Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000151-TA|BGIBMGA000151-PA|undefined
(214 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 33 0.024
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 33 0.024
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 30 0.30
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 29 0.52
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 28 0.90
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 1.6
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 1.6
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 27 2.1
SPCC18.06c |caf1|pop2|CCR4-Not complex subunit Caf1|Schizosaccha... 27 2.1
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 2.8
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 3.6
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 26 3.6
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.6
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 26 4.8
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 26 4.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 4.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.8
SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomy... 25 6.4
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 25 8.4
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 33.5 bits (73), Expect = 0.024
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 45 PARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAP 104
P+ G L A+ T ER++ + N++ + + DD NDN+ +
Sbjct: 485 PSADSGIRRHLEAMCGATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNN 544
Query: 105 DNDTTLTDKIKI 116
+N+T D K+
Sbjct: 545 NNNTNTDDDDKL 556
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 33.5 bits (73), Expect = 0.024
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 45 PARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAP 104
P+ G L A+ T ER++ + N++ + + DD NDN+ +
Sbjct: 485 PSADSGIRRHLEAMCGATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNN 544
Query: 105 DNDTTLTDKIKI 116
+N+T D K+
Sbjct: 545 NNNTNTDDDDKL 556
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 29.9 bits (64), Expect = 0.30
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 84 RRHDDMLNDNEGIPINQ--RTAPDNDTTLTDKIKILRPLVP 122
R+H+DML+D++ + + T+P+N L ++ + PL+P
Sbjct: 385 RKHEDMLHDSDALSLKHFAITSPNNQQFLNNQQRESAPLLP 425
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 51 SFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDND 107
S+ L LMN ++R+ ++ +K+ +K +Q + + LN+ E + + +ND
Sbjct: 19 SYEALLYLMNKNKKRKPEKKDDKEKSSKKVQKKNKVIESLNEME-VEMEDENENEND 74
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 54 KLTALMNNTEERRQSRRKNKDNLN-KILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTD 112
+L+ + + +++ ++ +N L +I Q+ RR++DM N I +R ++ L
Sbjct: 419 ELSKYVASIQDKERNNGQNALELQARIQQLERRNEDMYNKLLAEEIIRRKLHNDIQELKG 478
Query: 113 KIKI---LRPLVPMYEPE 127
I++ +RPL+P E E
Sbjct: 479 NIRVFCRVRPLLPSEESE 496
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 48 SQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNE 94
SQGS KL ++NTEER SR D + ++ + L+ +E
Sbjct: 979 SQGSSPKLKNNLSNTEERMGSRALLDDKTDSVITASNSTTSGLSRDE 1025
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 55 LTALMNNTEERRQSRRKNKDNLNK-ILQMNRRHDDMLNDNEGIP 97
L ++ N T E +R K+K +L K I + R+ D+ + + G+P
Sbjct: 479 LGSIENKTVEDTGNREKSKKSLRKDIREKKRKIDEYVEEKYGVP 522
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 155 WQWNSTVSRHGLGFSVITPDDLVNVNSTTKGMRFSGPSEDADRN 198
W N T+ LG+S I+P +++ +KG P E ++N
Sbjct: 180 WSKNETIDPIDLGYSFISP---FSMSFASKGNEILDPGESTNKN 220
>SPCC18.06c |caf1|pop2|CCR4-Not complex subunit
Caf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 138 GVFCNFETSNASMDLCTWQWNST 160
G+ + E NA ++ CTWQ+N T
Sbjct: 88 GLALSDEEGNAPVEACTWQFNFT 110
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 26.6 bits (56), Expect = 2.8
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 78 KILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKIKILRPLVPMYEPESKYNHVSQAS 137
K LQ +R + NDN+ + ++P +TDK+ + V + SK ++ S
Sbjct: 335 KSLQSMKRVTSIFNDNDDSFPSASSSPQRQAYMTDKMPLREIDVGSSQSSSKTARLN--S 392
Query: 138 GVFCNFETSNASMDLCTWQWNSTVSRHGLGFSVITPDDLVNVNSTTKG 185
+TS+ +S VITP DL TT+G
Sbjct: 393 SPKSTLKTSSVKTRRSHSAQSSRKVSDYPNMVVITPADLPEGIDTTQG 440
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 3.6
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 72 NKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKIKILRPLVPMYEPESKYN 131
+KD+L+ +Q+ H LN +EG + + P TLT I P+ P +N
Sbjct: 480 SKDDLSGFIQLLDSHAHHLNASEGSK-SSGSFPGKVQTLTSGIS------PVAHP---HN 529
Query: 132 HVSQASGVFCNFETSNASMDLCTWQWNSTVSRHGLGFS 169
+ ++ +F + +T N S+D ++ V +H LG S
Sbjct: 530 SLGSSNEIF-DIDTYNHSIDNSGSRFTEAV-KHNLGNS 565
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 48 SQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRR 85
SQ S+ +L T E Q RR+ ++ LN++ +++R+
Sbjct: 68 SQPSYARLVGPSRPTLENLQDRRELQEQLNELRKLSRK 105
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 26.2 bits (55), Expect = 3.6
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 53 HKLTALMNNTEERRQSRRKNKDNLNKILQMNRRH---DDMLNDNEGIPINQRTAPDNDTT 109
HKL + ++ E D ++KI+++N H DD+ I +R+ P +
Sbjct: 520 HKLKMVDRSSAELPNFDYLVSDQVHKIVEINDEHADCDDVNFSTASFEIYERSIPTHGA- 578
Query: 110 LTDKIKILRPLVPMYEPESKYNHVSQASGVFCNFETSNASMDLCTWQWNSTVS 162
+ KIL+ + E + +N ++ + N TS +S + + T++
Sbjct: 579 -DSERKILKRDSLLNEDDEIFNDLNSDKTIKTNQATSTSSSNTQEISYTGTLN 630
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 64 ERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKIKILRPLVPM 123
E+ R ++ LN I +R D +P++ + P + TL K+ + + + P
Sbjct: 108 EKLAGRDDDRSLLNLI---DRGEIDSKRQRHYVPVHCKRMPKKEITLNQKLYVSQVIGPA 164
Query: 124 YEPESK 129
P+SK
Sbjct: 165 DAPKSK 170
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 97 PINQRTAPDNDTTL-TDKIKILRPLVPMYEPESKYNHVSQASGVFCNFETSNASMDL 152
P++Q P++D+ I++LRPL+P Y +++ + ++ G+ + +NA ++L
Sbjct: 161 PVSQ--IPESDSICGASNIELLRPLLPYY--KNQILNTAKQHGIAWEEDPTNADINL 213
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 58 LMNNTEERRQSRRKNKDNLNKILQMNRR-HDDMLND 92
++ E QS+ N D+L+ IL+ NR+ + +L+D
Sbjct: 1036 MLKTLREALQSKTNNIDHLSTILERNRKEYKSLLDD 1071
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.8 bits (54), Expect = 4.8
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 109 TLTDKIKILRPLVPMYEPESKYNHVSQASGVFCNFETSNASMDLCTWQWNSTVSRHGL-G 167
T + K RP V Y S YN + +G +CN T+ + N+T S L G
Sbjct: 181 TTSHKSSSYRPTVFPYTTISHYNITNATNGTYCN-GTNGTNFTCIVNASNATNSTFWLNG 239
Query: 168 FSVITPDDLVNVNSTT 183
+ + N STT
Sbjct: 240 TNSTNGTNSTNSTSTT 255
>SPAC16A10.02 |||transcription coactivator Sub1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 136
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 39 KLRSASPARSQGSFHKLTALMNNTEERRQSRRKNK-DNLNKILQMNRRHDDMLNDNEGIP 97
K S P + S H+L +N TE++R + + + I + + DML +GI
Sbjct: 12 KASSKKPKTEKQSDHELHWALNETEKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIA 71
Query: 98 IN 99
+N
Sbjct: 72 LN 73
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 58 LMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDND 107
L +N + R +R KN+DN K + R+ + ++ RTAP+ D
Sbjct: 271 LCSNDSKHRIARLKNEDNTQKPISKKRKSKKASHKY----LSSRTAPNVD 316
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,434
Number of Sequences: 5004
Number of extensions: 37581
Number of successful extensions: 128
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 21
length of query: 214
length of database: 2,362,478
effective HSP length: 70
effective length of query: 144
effective length of database: 2,012,198
effective search space: 289756512
effective search space used: 289756512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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