Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000150-TA|BGIBMGA000150-PA|IPR006689|ARF/SAR
superfamily, IPR005225|Small GTP-binding protein domain,
IPR006687|GTP-binding protein SAR1, IPR006688|ADP-ribosylation factor
(429 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 107 4e-24
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 101 2e-22
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 100 4e-22
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 89 8e-19
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 46 8e-06
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 40 5e-04
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 40 5e-04
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 39 0.001
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 37 0.006
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 36 0.011
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 34 0.033
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 33 0.058
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 33 0.077
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 33 0.077
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 33 0.10
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 33 0.10
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 31 0.31
SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pom... 31 0.31
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 31 0.31
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 30 0.72
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 30 0.72
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 29 0.95
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.3
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 28 2.2
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 28 2.2
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 28 2.2
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 28 2.9
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 3.8
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 27 3.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 5.1
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 6.7
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 26 8.8
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 26 8.8
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 8.8
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 26 8.8
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 26 8.8
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 26 8.8
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 107 bits (256), Expect = 4e-24
Identities = 50/130 (38%), Positives = 81/130 (62%)
Query: 15 RQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPNFR 74
R++ ++L+GLDNAGKT + L+ + ++V PT GF+ L + TI+D+GG R
Sbjct: 15 REVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLR 74
Query: 75 QIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALD 134
W Y+ +I+V+DS D RL+ECR+ L+++L +++ +LVLANK D +GAL
Sbjct: 75 NFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALS 134
Query: 135 DIDVVEKLNI 144
++ + LNI
Sbjct: 135 SEEISKILNI 144
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 101 bits (242), Expect = 2e-22
Identities = 47/144 (32%), Positives = 83/144 (57%)
Query: 7 LFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYD 66
LF+ +R++ ++++GLD AGKT + L + +PTIGF + +++ T++D
Sbjct: 8 LFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWD 67
Query: 67 LGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANK 126
+GG R +W Y+ G+IFV+DS+D R+ E L+ +L+ D + +LV ANK
Sbjct: 68 VGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANK 127
Query: 127 QDKTGALDDIDVVEKLNIEPLVNR 150
QD A++ ++ +KL + L +R
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRHR 151
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 100 bits (239), Expect = 4e-22
Identities = 47/143 (32%), Positives = 82/143 (57%)
Query: 8 FRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDL 67
F R +++ ++++GLD AGKT + L ++ +PT+GF + +K+ ++D+
Sbjct: 13 FSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDV 72
Query: 68 GGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQ 127
GG R +W Y++ G+IFV+DS+D +R+ E R L ++S + +LVLANKQ
Sbjct: 73 GGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQ 132
Query: 128 DKTGALDDIDVVEKLNIEPLVNR 150
D GAL + + L ++ L +R
Sbjct: 133 DLPGALSPAQITDVLQLDKLKDR 155
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 89.4 bits (212), Expect = 8e-19
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 13 VRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPN 72
V + ++ +GLDNAGKT ++ L D+ + PT+ + L + T +DLGG
Sbjct: 17 VNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 73 FRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGA 132
R++W Y+ EV+G+++++D D RL E ++ L+ +L+ + ++ P L+L NK D GA
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGA 136
Query: 133 LDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYHWLLNYI 188
+ + ++ L + + + + S L+ G +G+ WL Y+
Sbjct: 137 ISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLR--QGYGEGFKWLAQYV 190
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 46.4 bits (105), Expect = 8e-06
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 19 LILIGLDNAGKTKTVNNLVGDK-DDKVLPTIG----FKAVNLVHKDTPVTIYDLGGGPNF 73
L+LIG GK+ + D + + TIG + L K + I+D G F
Sbjct: 11 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERF 70
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
R I YY HG+I V D +D + + L+++ + G L++ NK D
Sbjct: 71 RTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEI-DRYAVEGVNRLLVGNKSD 124
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 40.3 bits (90), Expect = 5e-04
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 15 RQIVLILIGLDNAGKTKTVNNLVGDK-DDKVLPTIGF----KAVNLVHKDTPVTIYDLGG 69
R+ L+ +G + GKT + + D+ D+ TIG K + L + + ++D G
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 70 GPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
FR + P Y + I V D ++ + +EDV + +R ++++ NK D
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRA-ERGDDVIIVLVGNKTD 127
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 40.3 bits (90), Expect = 5e-04
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 19 LILIGLDNAGKTKTVNNLVGDK-DDKVLPTIG--FKAVNL-VHKDTPVT--IYDLGGGPN 72
L+L+G GK+ V V D+ DD TIG F L + ++T V I+D G
Sbjct: 17 LVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQER 76
Query: 73 FRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
++ + P YY + I V D + + L++ +S +++ L G + + NK D
Sbjct: 77 YKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKE-LQRQAPEGIVIALAGNKLD 131
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 39.1 bits (87), Expect = 0.001
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 17 IVLILIGLDNAGKTKTVNNLVGDK-DDKVLPTIGF----KAVNLVHKDTPVTIYDLGGGP 71
I L+LIG GK+ + D + TIG + + L K + I+D G
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 72 NFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
FR I YY G++ + D +D D R+ +V H + +L+ NK D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILI-GNKCD 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 36.7 bits (81), Expect = 0.006
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 17 IVLILIGLDNAGKTKTVNNLVGDK-DDKVLPTIGFKAVNLV--------HKDTPVTIYDL 67
+ ++L G GK+ + V ++ DD+V T+G + + K + I+D
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 68 GGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDV 109
G FR + YY G + V D ++ +E S L D+
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDI 111
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 35.9 bits (79), Expect = 0.011
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 21 LIGLDNAGKTKTVNNLV-GDKDDKVLPTIGF----KAVNLVHKDTPVTIYDLGGGPNFRQ 75
+IG + GKT + V G D++ T+G K +++ + + +I+DLGG F
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 76 IWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLV 122
+ P ++ ++F+ D S S L+ + ++ + P+L+
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNK-TAVPILI 120
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 34.3 bits (75), Expect = 0.033
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 20 ILIGLDNAGKTKTVNNLVGDKDD-KVLPTIG--FKAVNLV--HKDTPVTIYDLGGGPNFR 74
+LIG GK+ + ++ + + TIG F N+V +K I+D G +R
Sbjct: 14 VLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYR 73
Query: 75 QIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
I YY G + V D + S D L+++ H S ++++ NK D
Sbjct: 74 AITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREH-ADSNIVIMLVGNKTD 126
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 33.5 bits (73), Expect = 0.058
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 8/148 (5%)
Query: 10 RSGVRRQIVLILIGLDNAGKTKTVNNLVG----DKDDKVLPTIGFKAVNLVHKDTPVTIY 65
RS R+ L+++G GK+ L+ D+ D + K + + + +
Sbjct: 2 RSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVL 61
Query: 66 DLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLAN 125
D G + + QY G + V + + S DE + + +L PV+++AN
Sbjct: 62 DTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVAN 121
Query: 126 KQDKTGALDDIDVVEKLNIEPLVNRYRC 153
K D L+ VV + E L C
Sbjct: 122 KCD----LEAERVVSRAEGEQLAKSMHC 145
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 33.1 bits (72), Expect = 0.077
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 208 ERRKRMLNKASNTNSQMSNSDDIATQTGFENP-NYDLTKSINNTEIIIVKPINHNQNSID 266
E++KR N S+T S A FENP N +K +NN V+ + SID
Sbjct: 167 EQKKREANVFSDTQSAPQLKSGKALPADFENPYNLSNSKPVNNNNEDRVEAVTSENKSID 226
Query: 267 S 267
S
Sbjct: 227 S 227
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 33.1 bits (72), Expect = 0.077
Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 19 LILIGLDNAGKTK-TVNNLVGDKDDKVLPTIG---FKAVNLVHKDTPVTIYDLGGGPNFR 74
+ ++G + GK+ TV + + PTI K + ++ I D G +
Sbjct: 9 IAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYS 68
Query: 75 QIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
+ ++ +HG + V + S + + V + +L+H P++V+ NK D
Sbjct: 69 ILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSD 122
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 32.7 bits (71), Expect = 0.10
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 302 IVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKNRPQSSPTLKKIKTEPHSKNSS 355
++ + L PK A + SP + K+ +D N+P S +L+K P S SS
Sbjct: 366 VMPVALSPKPAQKPPSPTIHTKAALADILDIFNQPLRSESLEKSSKSPISAQSS 419
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 32.7 bits (71), Expect = 0.10
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 21 LIGLDNAGKTKTVNNLVGDKDDKVLPTIG----FKAVNLVHK 58
L+G N GK+ T+N LVG K V T G F+ +NL K
Sbjct: 306 LVGYPNVGKSSTINALVGSKKVSVSSTPGKTKHFQTINLSEK 347
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 31.1 bits (67), Expect = 0.31
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 201 TDIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINH 260
T+I+ LERR +L+ +N ++ S + N +L NN +VK I H
Sbjct: 544 TEINNLLERRNELLDDYNNVQKILNES--LEASVHLNTKNLELADLNNN----LVKQIQH 597
Query: 261 -----NQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSP 298
NQ++++ TIT S N+ S+ +S G++S P
Sbjct: 598 RVPPENQSNLEHTITTSS-KNTTSSINPLTAVSSNSGQSSGRP 639
>SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 341
Score = 31.1 bits (67), Expect = 0.31
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 18 VLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDL 67
+LI+ G D KT T+ + G ++LP G + VH+D P I L
Sbjct: 272 MLIVAGTDRLDKTLTIGQMQGKYQLEILPETG----HFVHEDVPAKISSL 317
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 31.1 bits (67), Expect = 0.31
Identities = 24/115 (20%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 211 KRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTIT 270
+ +L++ +N + ++++ T +N + D TK +++ ++ + NH + +
Sbjct: 242 RNLLHRQLLSNHPFFSQNNVSLSTNSKNYSTDFTKIQSDSSLLQNRQQNHRIETDQLSHF 301
Query: 271 VESIDNSESTSCGKP-KLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKS 324
+ +D S S +P L PL R +S V + + +A +L+PI+R+++
Sbjct: 302 PDHLDPSRIPSPYQPSSLQPLESRKLHSK----VDVHSKKLNALSQLNPILRSEN 352
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 29.9 bits (64), Expect = 0.72
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 210 RKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHN 261
RKR+ N +S T ++S ++I + ++ L S + V+P+NH+
Sbjct: 274 RKRLENDSSTTKQRLSKLEEIIRNRAPPSYSFSLNCSHTYQPVSCVEPVNHD 325
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 29.9 bits (64), Expect = 0.72
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 262 QNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVR 321
Q + DS ES+DNS P ++ R SN P T V E + F P+++
Sbjct: 438 QENFDSDNLSESLDNSVENLTVFPSINSFGRRHSNLPQTTHVDTG-EQNTPF--TPPLLK 494
Query: 322 NKS-GGNQHMDFKNRPQSSPT 341
+ GN+ F + Q+SP+
Sbjct: 495 TVNLDGNKDFTFPSNSQNSPS 515
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 29.5 bits (63), Expect = 0.95
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 47 TIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSD 95
T+G ++ + ++D+GG R+ W + V+ +IF + +D
Sbjct: 179 TLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLND 227
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 1.3
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 1/153 (0%)
Query: 215 NKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESI 274
+ +S+ S S+S T T + + S + + + + +S ST++ S+
Sbjct: 267 SSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSM 326
Query: 275 DNSESTSCGKPKLSPLFGRASNSP-ATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFK 333
+S S S S +S+SP ++ KS+ S + + S + +
Sbjct: 327 SSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSS 386
Query: 334 NRPQSSPTLKKIKTEPHSKNSSMVEDKSDTSYV 366
+ S P + S + S KS ++ V
Sbjct: 387 SSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPV 419
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 28.3 bits (60), Expect = 2.2
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 216 KASNTNSQMSNSDDIATQTGFENP-----NYDLTKSINNT--EIIIVKPINHNQNSIDST 268
K NT ++ S F NP +Y+ + S + + V I N+ + +
Sbjct: 261 KVDNTETKFSKKTKNINDENFPNPFNVISSYETSASPSTVIDQSSQVSSIFVNKR-LRKS 319
Query: 269 ITVESIDNSESTSCGKPKLSPLFGRASNSP 298
+ ++I S+S S PK+ LF RAS P
Sbjct: 320 VNNQAISRSDSLSLDTPKIDSLFTRASIKP 349
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 14 RRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIG 49
++QI + LIG NAGK+ +N L K V P G
Sbjct: 308 KKQISVGLIGFPNAGKSSIINTLRKKKVCNVAPIPG 343
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 28.3 bits (60), Expect = 2.2
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 207 LERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSID 266
L+++K S +++S +D+ + E ++ T + N + + + S+
Sbjct: 761 LDQQKTSKALPSTGITKLSENDNEKAEESNETKGFNTTIAKQNDK----SSKSEGKASVA 816
Query: 267 STITVESIDNSESTSCGKPKL-SPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKS 324
+ + N+E TS KP L SPLF ++++P K P +F K P+V +S
Sbjct: 817 NMSALNKSTNNE-TSDSKPSLKSPLFNFSADAPTFTFNKPSETPPFSFNK--PLVEKES 872
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 2.9
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 233 QTGFENPNYDLTK-----SINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKL 287
QT EN N L + + E + + ++I S TV S + S K
Sbjct: 313 QTKIENDNMPLNRPYVLSATARNESSFENTLPNTPSAIQSLTTVSSNSSQNGRSSPKKSF 372
Query: 288 SPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKNRPQSSPT 341
F S ++ + S+ R SP+ +H+ + P+ +PT
Sbjct: 373 LSKFKLTSRPSTPNVGNTAPDALSSPRNDSPLTSAADEQMKHLSLQEEPKQNPT 426
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 292 GRASNSPATDIVKIELEPKSAFRKLSPIVRNKS 324
G + N P T+ + +E E + +SP+V+N++
Sbjct: 1341 GESVNEPNTEDLSLETEENTTVSDISPLVKNEA 1373
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 27.5 bits (58), Expect = 3.8
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 210 RKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTI 269
R+R+ + + + S + A++ F L SI+NTEI V + +++D
Sbjct: 384 RERVSGSTAQSADEASGHESDASEDTFSERTLGLN-SIDNTEISEVVSLGLVSSALDKIT 442
Query: 270 TVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKS 311
+ S DN T S ++ S A + + E +S
Sbjct: 443 GLLSADNLSETVSQARDFSHTLSKSLKSRAKSLSQKEAANRS 484
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 205 ADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEI 252
+DL ++ + K + Q S I+ +G E PN+ T S NN E+
Sbjct: 8 SDLPKKPANVKK-NRRRFQKSQKKSISPSSGSELPNFKTTISQNNEEV 54
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 26.6 bits (56), Expect = 6.7
Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 28 GKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGV 87
GKT++ +NL+ D +K + + V+ V DT + G P +
Sbjct: 614 GKTQSNSNLLQDNAEKHISKSNLEKVD-VKGDTSPNSVEQGIEPQAASV----VGSPRSS 668
Query: 88 IFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDK---TGALDDIDVVEKLNI 144
+ +S + L + LE + + P L N +D G+ DD + +
Sbjct: 669 LVSNNSLEEGALLKNSESLESIYGYLSEEPDPALTKLNTEDPFWTKGSSDDEHTIASVEQ 728
Query: 145 EPLVNRYRCPTLVESYTANIDTKSKK 170
+ + PT+VE+ T++ ++ + K
Sbjct: 729 DVYPYKTSLPTIVEATTSHTESSNSK 754
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 8.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 294 ASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGN---QHMDFKNRPQSSPTLKKIKTEPH 350
+S+SP ++ +A R+ SP+V +KS N H PQ+ T + P+
Sbjct: 264 SSSSPLLSSQTVKTTTSNASRQPSPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPN 323
Query: 351 SKNSSMVEDKSDTS 364
NS+ + +++TS
Sbjct: 324 --NSTPYQRRAETS 335
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/88 (20%), Positives = 43/88 (48%)
Query: 251 EIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPK 310
++ I P + +Q+S + + + + E+ S KP +S L ++ ++L +
Sbjct: 2529 KVNIEAPPSTSQDSRRLALLIIRVVSKENYSLIKPHISILAPAIFGCVRAIVIPVKLAAE 2588
Query: 311 SAFRKLSPIVRNKSGGNQHMDFKNRPQS 338
+AF L +V + S N++++ P++
Sbjct: 2589 AAFLALFQLVEDDSVLNKYIETLEGPRA 2616
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 8.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 243 LTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDI 302
L IN + ++PI +S +S I + + + T K LFG +P+TD+
Sbjct: 643 LLDEINLASLETLEPIGQLLSSYESGILLS--ERGDITPITPHKNFRLFG--CMNPSTDV 698
Query: 303 VKIELEP 309
K ELEP
Sbjct: 699 GKRELEP 705
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 218 SNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTIT 270
+N + +NS + EN N ++ SI+NT + + +N N ++S++T
Sbjct: 422 ANVSVAWANSTNQIILKNQENINNNMFGSIHNTTLSLNSTLNTFMNELNSSMT 474
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 142 LNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYHWLLNYIIRRYGD 194
L PL ++ +++ +NI TK D LRK W+L +++ +GD
Sbjct: 455 LKFSPLREKFLTTNFIDTLISNISTK------DSSLRKKTVWVLRHVV--FGD 499
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 216 KASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESID 275
K + QM+ S +QT + N D TK++ T I + P+ N+++I S ++
Sbjct: 262 KLTKVEKQMTKSVSKTSQTDKDEDNLDFTKNL-LTRIKNLHPLT-NKSTIHSLLSYVFSR 319
Query: 276 NSESTSC 282
+++ +C
Sbjct: 320 QTQNIAC 326
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,045,104
Number of Sequences: 5004
Number of extensions: 92644
Number of successful extensions: 291
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 264
Number of HSP's gapped (non-prelim): 43
length of query: 429
length of database: 2,362,478
effective HSP length: 75
effective length of query: 354
effective length of database: 1,987,178
effective search space: 703461012
effective search space used: 703461012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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