Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000150-TA|BGIBMGA000150-PA|IPR006689|ARF/SAR
superfamily, IPR005225|Small GTP-binding protein domain,
IPR006687|GTP-binding protein SAR1, IPR006688|ADP-ribosylation factor
(429 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 108 1e-23
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 5e-23
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 104 1e-22
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 103 3e-22
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 102 6e-22
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 97 2e-20
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 6e-16
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 82 7e-16
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 80 3e-15
SB_214| Best HMM Match : Arf (HMM E-Value=0) 71 1e-12
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 67 2e-11
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 57 3e-08
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 55 1e-07
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 53 5e-07
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 52 9e-07
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 5e-06
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 43 4e-04
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 42 0.001
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.005
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 38 0.021
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 37 0.027
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.063
SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09) 36 0.063
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 34 0.19
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 33 0.34
SB_42819| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.59
SB_16678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.78
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 32 0.78
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.78
SB_54473| Best HMM Match : DLIC (HMM E-Value=0) 32 1.0
SB_39751| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_50214| Best HMM Match : RNA_capsid (HMM E-Value=9.8) 31 1.4
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 31 1.8
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 31 1.8
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_49764| Best HMM Match : HSA (HMM E-Value=2.2) 31 2.4
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 31 2.4
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 2.4
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 30 3.1
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 30 3.1
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_24400| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9) 30 4.2
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 30 4.2
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 30 4.2
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.2
SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015) 30 4.2
SB_51580| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 29 5.5
SB_7657| Best HMM Match : ResIII (HMM E-Value=0.0005) 29 5.5
SB_4676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 29 5.5
SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7) 29 5.5
SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1) 29 5.5
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 29 7.3
SB_55319| Best HMM Match : Hexapep (HMM E-Value=0.16) 29 9.6
SB_51702| Best HMM Match : SURF6 (HMM E-Value=4) 29 9.6
SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18) 29 9.6
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 29 9.6
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 29 9.6
SB_10790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_6145| Best HMM Match : Hexapep (HMM E-Value=2.2) 29 9.6
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 29 9.6
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 108 bits (259), Expect = 1e-23
Identities = 55/151 (36%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 1 MGNC-FGLFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKD 59
MGN LFRR + ++ L+++GLD AGKT + +L D+ +PTIGF + +K+
Sbjct: 74 MGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKN 133
Query: 60 TPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKP 119
T++D+GG R +W Y+ E G+IFV+DS+D R+ E + L +L + +
Sbjct: 134 IKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAA 193
Query: 120 VLVLANKQDKTGALDDIDVVEKLNIEPLVNR 150
+LVLANKQD ++ ++ EKL++ L +R
Sbjct: 194 LLVLANKQDLPDSMSTTELSEKLSLHTLRSR 224
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 105 bits (253), Expect = 5e-23
Identities = 50/144 (34%), Positives = 85/144 (59%)
Query: 7 LFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYD 66
LF R ++Q+ ++++GLD AGKT + L + +PTIGF ++ +K+ T++D
Sbjct: 8 LFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWD 67
Query: 67 LGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANK 126
+GG R +W Y+ G+I+V+DS+D R++E + L +L D + VLV+ANK
Sbjct: 68 VGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANK 127
Query: 127 QDKTGALDDIDVVEKLNIEPLVNR 150
QD AL ++ EKL ++ + +R
Sbjct: 128 QDLPNALSVSEITEKLGLQSIRDR 151
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 104 bits (250), Expect = 1e-22
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 1 MGNCFG-LFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKD 59
MG F LF ++++ ++++GLD AGKT + L + +PTIGF + +K+
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 60 TPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKP 119
T++D+GG R +W Y+ G+IFV+DS+D R+ E R L +L+ D +
Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAV 120
Query: 120 VLVLANKQDKTGALDDIDVVEKLNIEPLVNRY-----RCPTLVESYTANIDTKSKKLK 172
+LV ANKQD A++ ++ +KL + L NR C T + +D S LK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLK 178
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 103 bits (247), Expect = 3e-22
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 21 LIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQY 80
+IGLDNAGKT + L ++ +PT+GF + +K+ T++D+GG R +W Y
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60
Query: 81 YSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVE 140
Y G+IFV+DS+D R +E R+ L +L+ + + +LV+ANKQD A+ ++ E
Sbjct: 61 YQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIRE 120
Query: 141 KLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYHWLLNYIIRRYGDINLRVQ 200
KL + + R P V+S A K + GL +G W+ I + L
Sbjct: 121 KLKLNEIRGR---PWFVQSACA---VKGE------GLFEGLDWMATQIRNNKYWVFLVFN 168
Query: 201 TDIHADLERRKRM--LNKASNTNSQMSNSDD 229
T + A +R + +NK + N N DD
Sbjct: 169 TCVFAHFDRVTSLTFINKKDDGND--GNDDD 197
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 102 bits (244), Expect = 6e-22
Identities = 44/141 (31%), Positives = 89/141 (63%), Gaps = 1/141 (0%)
Query: 14 RRQIVLILIGLDNAGKTKTVNNLV-GDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPN 72
+ ++ L L+GL +GKT VN + G + ++PT+GF + + + ++D+GG P
Sbjct: 18 KEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTIKVWDIGGQPR 77
Query: 73 FRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGA 132
FR +W +Y V+ +++++D++D +L+ ++ L ++L +++G P+LVL NK+D +
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLPNS 137
Query: 133 LDDIDVVEKLNIEPLVNRYRC 153
LD+ ++VE+LN+ + +R C
Sbjct: 138 LDEKELVERLNLTSVQDREIC 158
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 97.1 bits (231), Expect = 2e-20
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 7 LFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVH-KDTPVTIY 65
LF G RQ+ ++++GLD AGKT + L + +PTIGF L K+ +TI+
Sbjct: 11 LFSEFG-NRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIW 69
Query: 66 DLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLAN 125
D+GG R +W Y+ G++FV+DSSD R+ E + L VL D PV+V+AN
Sbjct: 70 DVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVAN 129
Query: 126 KQDKTGALDDIDVVEKLNI 144
KQD AL ++ + L +
Sbjct: 130 KQDLPNALKAGEMAKHLGL 148
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 82.6 bits (195), Expect = 6e-16
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 19 LILIGLDNAGKTKTVNNLV-GD--KDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPNFRQ 75
++++GLD +GK+ ++ L GD K T GF V L + I+++GG +R
Sbjct: 169 ILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRA 228
Query: 76 IWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALDD 135
WP + ++ +++V+DSSD R +E R L+ +LS+ ++G PVL++A+KQD GA
Sbjct: 229 YWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGARQL 288
Query: 136 IDVVEKLNI 144
++V L I
Sbjct: 289 SEIVSVLGI 297
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 82.2 bits (194), Expect = 7e-16
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 29 KTKTVNNLVGDKDDKVLPTIGFKAVNLVH-KDTPVTIYDLGGGPNFRQIWPQYYSEVHGV 87
KT + L + +PT+ F + K+ +++D+GG R++W Y+ G+
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 88 IFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNI 144
IFV+DS+D R+ E R L VL H ++G PV+V+ANKQD GA+ + E+L++
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSL 238
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 80.2 bits (189), Expect = 3e-15
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 1 MGNCFGL-FRRSG----VRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNL 55
MGN F + FRR ++R ++++GLD +GKT + + +PT F +
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETI 60
Query: 56 -VHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDR 114
K ++D+GG R +W Y + VI+V+DS+ +L+E R L ++L+ +
Sbjct: 61 RPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQ 120
Query: 115 ISGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRY 151
++G P+L+ ANKQD A+ ++ L++ L R+
Sbjct: 121 LNGAPILIFANKQDCPNAIPPREITHMLSLHDLNARH 157
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 63 TIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLV 122
T +DLGG R+IW Y+ V+G++F+ID +D RL E + L+ +L+ +++S PVL+
Sbjct: 23 TTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCPVLI 82
Query: 123 LANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYH 182
L NK D GA+ + + + + + T ++ + G +G+
Sbjct: 83 LGNKIDIPGAVGEDYIRQNFGLFGQTTGKGSVAAKDLATRPMELFMCSVLKREGYGEGFR 142
Query: 183 WLLNYI 188
WL YI
Sbjct: 143 WLSEYI 148
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 67.3 bits (157), Expect = 2e-11
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 44 VLPTIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECR 103
V P GF + +K+ T++D+GG R +W Y+ G+IFV+DS+D R E +
Sbjct: 494 VSPVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAK 553
Query: 104 SVLEDVLSHDRISGKPVLVLANKQ 127
L +L+ D + +LV ANKQ
Sbjct: 554 EELSRMLAEDELRDAVLLVFANKQ 577
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 60.1 bits (139), Expect = 3e-09
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 15 RQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHK-DTPVTIYDLGGGPNF 73
R++ ++L+GLDN+GKT + +L + + PT GF ++ K + ++D+GG
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKI 75
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGAL 133
R W Y+ +++D LDE +L +++ G P+LV ANKQD A
Sbjct: 76 RPYWKNYF----------ENTDILELDE-------LLEEEKLIGVPLLVFANKQDLMNAA 118
Query: 134 DDIDVVEKLNIEPLVNR 150
++ L + + +R
Sbjct: 119 TPAEISSNLGLNTIRSR 135
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 56.8 bits (131), Expect = 3e-08
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 64 IYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVL 123
+ D+GG R +W Y++ G+IFV+D +D R+DE R L+ +++ + +L+
Sbjct: 141 LLDVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIF 200
Query: 124 ANKQD 128
ANKQD
Sbjct: 201 ANKQD 205
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 58 KDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISG 117
K+ ++D+GG PN R+ + + + G+I+V+DS+D RL+E + L +L +
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRLNEAQ--LLGILQEKVMVD 71
Query: 118 KPVLVLANKQDKTGALDDIDVVEKLNI 144
PV+V+ANKQD L D+ E L +
Sbjct: 72 VPVVVVANKQDLPNVLKAGDIAEHLGL 98
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 52.8 bits (121), Expect = 5e-07
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 69 GGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
G + R W YY+ VI+V+DS D R+ + L +L D + ++V ANKQD
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 129 KTGALDDIDVVEKLNIEPLVNR 150
GA+ +V L + L +R
Sbjct: 215 MEGAMSSSEVSNALGLSALKSR 236
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 52.0 bits (119), Expect = 9e-07
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 84 VHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLV 122
V GV+FV+D+S+ R+DECRS+L + + R+SGKP+L+
Sbjct: 36 VFGVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 49.6 bits (113), Expect = 5e-06
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 6 GLFRRSGVRRQIVLILIGLDNAGKTKTVNNLV--------GDKDDKVLPTIGFKAVNLVH 57
GL++ + + ++++GLDNAGKT + + G +K+ T+G +
Sbjct: 11 GLWKYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITI 70
Query: 58 KDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISG 117
+ +DLGG R +W + EV V ++ +R +E+ L+H + G
Sbjct: 71 SHVKLMFWDLGGQQELRTLWDKV--EVMSVKILM-----TRF----LPVEEALTHKALEG 119
Query: 118 KPVLVLANKQD 128
P+LVLANKQD
Sbjct: 120 VPLLVLANKQD 130
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 46.0 bits (104), Expect = 6e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 62 VTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVL 110
+ I+D+GG + R W Y+ G+I+V+DS+D RL +C+ L+ +L
Sbjct: 4 LNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLL 52
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 44.4 bits (100), Expect = 2e-04
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 19 LILIGLDNAGKTKTVNNLVGDK-DDKVLPTIGF----KAVNLVHKDTPVTIYDLGGGPNF 73
++++G GK+ + D D + TIG K + + + I+D G F
Sbjct: 11 ILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERF 70
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDK 129
R + P YY GVI V D++ D+ L +V + +++ NK DK
Sbjct: 71 RTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDK 126
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 43.2 bits (97), Expect = 4e-04
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 19 LILIGLDNAGKTKTVNNLV-GDKDDKVLPTIG----FKAVNLVHKDTPVTIYDLGGGPNF 73
+IL+G N GKT V G PTIG K V++ + + I+D G F
Sbjct: 10 IILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERF 69
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVL--VLANKQD 128
R I YY GVI D ++ + L+D +R + K VL ++ NK D
Sbjct: 70 RSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDT---NRYTSKDVLIAIVGNKSD 123
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 43.2 bits (97), Expect = 4e-04
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 11/151 (7%)
Query: 19 LILIGLDNAGKTKTVNNLVGDK-DDKVLPTIG--FKAVNLV--HKDTPVTIYDLGGGPNF 73
L+LIG GK+ + D + + TIG FK L K + I+D G F
Sbjct: 11 LLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERF 70
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD----- 128
R + YY HG++ + D ++ LE+V S G +++ NK D
Sbjct: 71 RTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEV-SEYACEGVNTILVGNKCDLIDCR 129
Query: 129 KTGALDDIDVVEKLNIEPLVNRYRCPTLVES 159
+ G + EKL+I + + T VES
Sbjct: 130 QVGYNTAKEFAEKLDISFIETSAKDSTNVES 160
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 123 LANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKID 174
LANKQD GA++D +V + L++ L+ +++CP V+ ID KK K++
Sbjct: 30 LANKQDLEGAMNDDEVYQSLDLGALIAKHKCPCQVK----RIDAAEKKAKLE 77
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 62 VTIYDLGGGPNFRQIWPQYYSEV 84
VT+YDLGGG R IW YY+EV
Sbjct: 6 VTVYDLGGGAKIRGIWKDYYAEV 28
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 39.5 bits (88), Expect = 0.005
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 51 KAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVL 110
+ + L K + I+D G FR I YY HG+I V D +D + + L+++
Sbjct: 69 RTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEI- 127
Query: 111 SHDRISGKPV--LVLANKQDKT 130
DR + + V L++ NK D T
Sbjct: 128 --DRYACENVNKLLVGNKCDLT 147
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 37.5 bits (83), Expect = 0.021
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 15 RQIVLILIGLDNAGKTKTVNNLVGDK-DDKVLPTIG----FKAVNLVHKDTPVTIYDLGG 69
R ++ IG GK+ ++ D+ TIG K +N+ + + ++D G
Sbjct: 895 RVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAG 954
Query: 70 GPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDK 129
FR I QY+ + G++ D + S + + V G +VL NK D
Sbjct: 955 QERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSV-EEGAEEGVAKMVLGNKTD- 1012
Query: 130 TGALDDIDVVEKLNIEPLVNRY 151
++ VV+ ++ + L N+Y
Sbjct: 1013 LAEDEESRVVKTIDGKNLANQY 1034
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 37.1 bits (82), Expect = 0.027
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 49 GFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLED 108
G+ N +D + I+D G FR I YY +GVI D + C ED
Sbjct: 84 GYPGYNNSLQDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGED 143
Query: 109 VLSHDRISGKPVLVLANKQD 128
V + + +LV NK+D
Sbjct: 144 VQKYAPENAIKLLV-GNKKD 162
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 35.9 bits (79), Expect = 0.063
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 19 LILIGLDNAGKTKTVNNL-VGDKDDKVLPTIGF----KAVNLVHKDTPVTIYDLGGGPNF 73
+I+IG N GKT L G ++ TIG K++ L + + ++D G F
Sbjct: 49 IIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERF 108
Query: 74 RQIWP-QYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
R+ YY V+ V+F+ D + + + + + H P +++ NK D
Sbjct: 109 RKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCD 164
>SB_5283| Best HMM Match : Ank (HMM E-Value=3.1e-09)
Length = 481
Score = 35.9 bits (79), Expect = 0.063
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 221 NSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSEST 280
N++ + DIA G E+ +L K +++ + I+ I HN S DS S+ +S S
Sbjct: 238 NNEGKTALDIALARGTESLVEELIKVVDHDDSNILSGIVHNDESSDSFCNYNSLAHSPSI 297
Query: 281 SCGKPKL-SPLFGRASNSPATD 301
S P L SP+ G S+ D
Sbjct: 298 SNTSPSLESPVPGTISDGEDGD 319
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 34.3 bits (75), Expect = 0.19
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 49 GFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLED 108
G K VN+ K + I+D G FR + YY G + V D S SR E + L +
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIS--SR--ETFNSLTN 188
Query: 109 VLSHDRISGKP---VLVLANKQD 128
L+ R P ++++ NK+D
Sbjct: 189 WLTDARTLASPNIVIILVGNKKD 211
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 33.5 bits (73), Expect = 0.34
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 51 KAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDV 109
+ +N+ + + I+D G FR I YY HGVI V D + + L ++
Sbjct: 17 RTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI 75
>SB_42819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 33.5 bits (73), Expect = 0.34
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 107 EDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVN-RYRCPTLVESYTANID 165
E V + G+P +LA +D+TG D DV+EKL I+P R R + I
Sbjct: 167 ESVRMYYMQGGEPGTLLAAMKDETGY--DFDVIEKLRIQPSTRIRNRSVFFSFRFRLRIR 224
Query: 166 TKSKKLKID 174
+++++++D
Sbjct: 225 QRNRRIRVD 233
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 32.7 bits (71), Expect = 0.59
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 99 LDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVE 158
+D+ + +LE LS ++ + K TGA DD VE L E L N R P +
Sbjct: 1241 MDQTKKILEK-LSSPKMVDVAGNIATFKDQITGARDDARKVEILQKELLRNLMRVPLTIH 1299
Query: 159 SYTANIDTKSKKLKIDPGLRKG 180
YT + + + L+ G RKG
Sbjct: 1300 CYTNEVRSIATVLE---GCRKG 1318
>SB_16678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 258 INHNQNSIDSTITVESIDNS--ESTSCGKPKLSPLFGRASNSPAT--DIVKIELEPKSAF 313
+++N + +T E + N+ ES +P+ L+ R+S+ P + + I+ + + F
Sbjct: 85 VDNNDFTSRKMLTAEEMINAVFESNLNNRPENQRLYFRSSSMPTALHNDICIDSQMRELF 144
Query: 314 RKLSPIVRNKSGGNQH 329
K+SPIV +SG +++
Sbjct: 145 DKVSPIVATESGDDEN 160
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 32.3 bits (70), Expect = 0.78
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 49 GFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYY 81
GF + H+ TI+D+GG R +W YY
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 32.3 bits (70), Expect = 0.78
Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 6/131 (4%)
Query: 19 LILIGLDNAGKTKTVNNLV-GDKDDKVLPTIGFKA---VNLVHKD-TPVTIYDLGGGPNF 73
++++G GKT + G D T+G V +H D + +D G F
Sbjct: 14 VLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKF 73
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGAL 133
R I YY VI V D ++ L +V + + VLV NK D GA
Sbjct: 74 RGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLV-GNKTDLKGAS 132
Query: 134 DDIDVVEKLNI 144
++ N+
Sbjct: 133 RKVNTRSAANL 143
>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
Length = 1401
Score = 31.9 bits (69), Expect = 1.0
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 19 LILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNL-VHKD-----TPVTIYDLGGGPN 72
+ILIG D +GKT ++ L G K+D + G + L VH + T + ++ L G P
Sbjct: 865 IILIGNDESGKTTLISKLRG-KEDDISKGHGLEYTYLEVHDEEIDDYTRLNVWILDGDPR 923
Query: 73 FRQIWPQYYSEVHG-VIFVIDSSDCSR 98
+ + + H + V+ DCSR
Sbjct: 924 NKSLLKYALTPKHARDVLVVMVVDCSR 950
>SB_39751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 213 MLNKASNTNSQMSNSDDIATQTGFENP-NYDLTKSINNTEIIIVKP---INHNQNSIDST 268
++N +N N+ ++N + + N NY NN II+ INH+ NS+ +T
Sbjct: 26 VINIMTNNNNSINNKNSEKSSNNINNDFNYKNINKSNNINNIIINNNNYINHDINSLSTT 85
Query: 269 ITVESIDNSESTS 281
I + ++TS
Sbjct: 86 TINNKITSIKTTS 98
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 58 KDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDV 109
K P + D+GG + R W Q + EV ++F++ SS + D + LEDV
Sbjct: 404 KSIPFKMVDVGGQRSQRAKWFQCFDEVTSILFLVSSSAYDQGDPHK--LEDV 453
>SB_50214| Best HMM Match : RNA_capsid (HMM E-Value=9.8)
Length = 468
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 210 RKRMLNKA-SNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDST 268
R R ++A ++ +SQ N + +T+ F+ +++N T + ++ PIN N S
Sbjct: 262 RPRHRSRAGASGSSQRPNEAEQSTEVFFKGTMAQSHRAMNRTRVKVIYPINSNDTKA-SN 320
Query: 269 ITVESIDNSESTSCGK 284
IT + N + K
Sbjct: 321 ITTDKASNGATVQSNK 336
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 19 LILIGLDNAGKTKTVNNLVGDKDDKVLP----TIGF----KAVNLVHKDTPVTIYDLGGG 70
++L+G GKT L K++ P TIG K V + K ++++D G
Sbjct: 14 VVLLGEAGVGKTSLFYRL---KENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 71 PNFRQIWPQYYSEVHGVIFVIDSSD 95
FR + YY H I + + D
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDD 95
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 31.1 bits (67), Expect = 1.8
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 206 DLERR--KRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQN 263
DLER+ K +N N N+D + +N + SINN I N N N
Sbjct: 1683 DLERKLTKTQQQHNNNNNEAGGNNDKNCSSNNSDNNSIINNNSINNNNSSINNRSN-NHN 1741
Query: 264 SIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNK 323
+ +++I + +NS + ++ +NS + I S S I+ N
Sbjct: 1742 NNNNSINNCNNNNSINNRNNNNSINNRNNTNNNSINNNNSSINNNNSSINNNNSSIINNN 1801
Query: 324 SGGNQHMDFKNRPQSS-----PTLKKIKTEPHSKNSSMVEDKS----DTSYVGDGNRTWD 374
S N + N SS + + ++ NSS++ + S + S + + N T +
Sbjct: 1802 SSINNNNSSINNNNSSIINNNSSNNNNNSSINNNNSSIINNNSSIINNNSSINNRNNTNN 1861
Query: 375 GAMVNHSRVLVNA 387
++ N S N+
Sbjct: 1862 NSINNRSNTNNNS 1874
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 31.1 bits (67), Expect = 1.8
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 19/154 (12%)
Query: 197 LRVQTDIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENP-----NYDLTKSINNTE 251
++V+T + +D K +NKASN S + S D+ T N + +S+NNTE
Sbjct: 684 VKVRTPLASDASETKNTINKASNAFSGLLQSGDVQGATEVANAILGTMDNAPQESLNNTE 743
Query: 252 --------------IIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNS 297
+ + I Q +D+ + + T +++ + GRA+ +
Sbjct: 744 RTQNHPQSGRWTYALHFISSIFAFQQIVDNLVEQMTSQVQVQTLQALSQVTSVIGRATAN 803
Query: 298 PATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMD 331
P +K + + A L+ ++++KS +D
Sbjct: 804 PQEVSMKAQNDSLKALVSLTGLLQSKSKNTDVLD 837
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 30.7 bits (66), Expect = 2.4
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 272 ESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMD 331
+ +DN E C K P RASNSP ++ I P S+ ++ + N SG D
Sbjct: 928 QEVDNIE---CDSQKQQPSTRRASNSPPAELSFI---PDSSIEHVN-VGNNSSGTQTTGD 980
Query: 332 FKNRPQSSPTLKK 344
FK + LKK
Sbjct: 981 FKRSGFKNKILKK 993
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 30.7 bits (66), Expect = 2.4
Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 116 SGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDP 175
+ K L + DK + +++ + + NI+ LV+ ++ + NID +++
Sbjct: 1473 NNKGELAKSTNIDKLVSNNEVVLAKSTNIDKLVSNNEVE--YDAKSTNIDKLVSNNEVE- 1529
Query: 176 GLRKGYHWLLNYIIRRYGDINLRVQTDIHADLERRKRMLNKASNTNSQMSNSDDIATQTG 235
L K + ++ ++ ++ L T+I + K L K++N N +SN++ +
Sbjct: 1530 -LAKSTN--IDKLVSN-NEVELAKSTNIDKLVSNNKGELAKSTNINKLVSNNEVVLA--- 1582
Query: 236 FENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGK 284
++ N D K ++N E+ + K N ID ++ ++ ++ST+ K
Sbjct: 1583 -KSTNID--KLVSNNEVELAKSTN-----IDKLVSNNEVELAKSTNIDK 1623
>SB_49764| Best HMM Match : HSA (HMM E-Value=2.2)
Length = 342
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 208 ERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIII 254
++RK+ SNT+ + N+DDI+ G E + NN EI++
Sbjct: 23 KKRKKKQKVVSNTSEKDLNNDDISEMAGKEAALSSQKMNANNLEILV 69
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 47 TIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVI----------DSSDC 96
T G V +K ++D+GG + R+ W + +V +I+ + +
Sbjct: 230 TTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDEST 289
Query: 97 SRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
+R++E + E ++++ V++ NK+D
Sbjct: 290 NRMEESLKLFESIINNKWFVDTSVILFLNKKD 321
>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4554
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 274 IDNSESTSCG--KPKLSPLFGRASNSPATDIVKIELEPK-SAFRKLSPI 319
+D S T CG KP+++ LFG + PA + V +L RK +PI
Sbjct: 2261 LDESTKTGCGEMKPEVARLFGIQKHEPALEDVLFQLSSAVQCTRKKTPI 2309
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 47 TIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVI----------DSSDC 96
T G V +K ++D+GG + R+ W + +V +I+ + +
Sbjct: 182 TTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDEST 241
Query: 97 SRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
+R++E + E ++++ V++ NK+D
Sbjct: 242 NRMEESLKLFESIINNKWFVDTSVILFLNKKD 273
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 30.7 bits (66), Expect = 2.4
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 215 NKASNTNSQMSNSDD-IATQTGFENPNYDLTKSIN----NTEIIIVKPINHNQNSIDSTI 269
+ + N+NS SN+D+ + + EN D + S N N+ KP N N N+ +S
Sbjct: 98 SSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDN 157
Query: 270 TVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQH 329
+ + DNS S + +P S++ TD + F + N + N +
Sbjct: 158 S--NTDNSNSDNSTSDNSNP-DNLTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSN 214
Query: 330 MDFKNRPQSSPTLKKIKTEPHSKNSSMVEDKSDTSYVGDGN 370
D + +S + ++ NS+ K D S + N
Sbjct: 215 SD-NSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSN 254
Score = 29.1 bits (62), Expect = 7.3
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 3/148 (2%)
Query: 217 ASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESIDN 276
+ N+NS S SD+ + + +Y + +N++ P N N ++ S+ + DN
Sbjct: 210 SDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNTDN-SSSADNSNPDN 268
Query: 277 SESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKNRP 336
S S + S +S++ +D + + + N + N + D N
Sbjct: 269 SNSDNSNTDN-SNSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSD 327
Query: 337 QSSPTLKKIKTEPHSKNSSMVEDKSDTS 364
S P +S NS+ SD S
Sbjct: 328 DSKPDNSNTNNS-NSDNSNSDNSTSDNS 354
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 30.3 bits (65), Expect = 3.1
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 58 KDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISG 117
K + I+D G F I YY G++ V D ++ L+ + H
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDV 62
Query: 118 KPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTK 167
K +LV NK D + D V+ + E L + Y + S +NI+ +
Sbjct: 63 KRMLV-GNKCD----MYDKRVISQTKGEQLASSYGISFIETSALSNINVE 107
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 19 LILIGLDNAGKTKTVNNLVGDKDD-KVLPTIGF----KAVNLVHKDTPVTIYDLGGGPNF 73
++LIG GK+ ++ ++ D + TIG +++ + K ++D G +
Sbjct: 15 IVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERY 74
Query: 74 RQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSH 112
R I YY G + V D + + L +V H
Sbjct: 75 RAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREH 113
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 215 NKASNTNS-QMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVES 273
N SN NS SNS+ + N N +T ++ T HN +S S S
Sbjct: 509 NSDSNNNSNSNSNSNSNSNSNSNSNSNSTVTVTVTATATATATVTVHNSSSSSSNSNSNS 568
Query: 274 IDNSESTS 281
NS S S
Sbjct: 569 NSNSNSNS 576
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 140 EKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYHWLLNYIIRRYGDINLRV 199
E +E L+ YR + + S T +I KS + ++ + + H + G+ V
Sbjct: 2012 ELTRVEALLETYRKSSSITSSTPSILQKSPGITVEEDMSQVKH-----MEEDLGNFLFYV 2066
Query: 200 QTDIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKS 246
Q ++ A +ER + +++ S ++SN D+ T+ E + +T++
Sbjct: 2067 QEEL-AKIERNQTAIDENSQQREKISNLRDVMTKRVSEEWSIRITEN 2112
>SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 14 RRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIG 49
++QI + LIG N GK+ +N L K KV P G
Sbjct: 165 KKQISVGLIGYPNVGKSSIINTLKAKKVCKVAPIAG 200
>SB_24400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 206 DLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPI--NHNQN 263
D++ ++K ++ ++N++D + + N + S NN + + I N++ N
Sbjct: 637 DIQWGSHQVSKYCSSQQVINNNNDNSNNNNNSSSNNNNNSSSNNN-VKFCRCIKNNNDMN 695
Query: 264 SIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIE 306
+ID T T+ + S + K + L G+A S D+ ++E
Sbjct: 696 NID-TDTINNNSKSNKNNINNCKKNFLAGKAIASVQRDVTRLE 737
>SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9)
Length = 459
Score = 29.9 bits (64), Expect = 4.2
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 53 VNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDV--- 109
VN+V KDT + D+ G + ++ +D D L + V+EDV
Sbjct: 19 VNVVDKDTLLDNVDVVDGDTLLDDVDDVDKDT--LLDDVDVVDKDTLLDDVDVVEDVGLL 76
Query: 110 LSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVE 158
D + G P+L + + G LDD+DVV+ + V+ TL+E
Sbjct: 77 EDVDVVDGDPLLDDVDVVEDVGLLDDVDVVDGATLLEYVDVVDGATLLE 125
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 29.9 bits (64), Expect = 4.2
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 15 RQIVLILIGLDNAGKTKTVNNLVGDKDDKVL-PTIG--FKAVNLV--HKDTPVTIYDLGG 69
R ++L G GK+ + L ++ L T+G F+ LV K + ++D G
Sbjct: 441 RMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAG 500
Query: 70 GPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
FR I Y+ + GV+ + D + + + R +E + P+++ NK D
Sbjct: 501 QERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE-AIEESCSKPVPIMLCGNKID 558
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 29.9 bits (64), Expect = 4.2
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 16 QIVLILIGLDNAGKTKTVNNLV-GDKDDKVLPTIG--FKAVNLVHKDTPVT--IYDLGGG 70
Q L+L+G GK+ V V G + TIG F + DT V I+D G
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 71 PNFRQIWPQYYSEVHGVIFVID 92
+ + P YY I V D
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYD 102
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.9 bits (64), Expect = 4.2
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 242 DLTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATD 301
D TK + +++ + I H QN ID + KPK++ A+N +++
Sbjct: 866 DETKP-HEAPVLLTRDIEHKQNKIDRELLYLLNKAKYYVPKPKPKVNDT-ANANNKSSSN 923
Query: 302 IVKIE---------LEPKSAFRKLSPIVRNKSGGNQHMDFKNRPQSSPTLKKIKTEPHSK 352
K E K AF+K + SG + +D K++ +S P + + K
Sbjct: 924 TTKPEDKSDDNGKGFSQKKAFKK----PKTPSGKDDELDEKDKDESKPKDDVAEEKSDEK 979
Query: 353 NSSMVEDKSDT 363
+ ED DT
Sbjct: 980 PLPLGEDAKDT 990
>SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015)
Length = 921
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 170 KLKIDPGLRKGYHWLLNYIIRRYGDINLRVQTDIHADLERRKRMLNKASNT--NSQMSNS 227
++K +PGLR +LN ++G N + ++ + +R ++L SN N QM N
Sbjct: 744 EIKKNPGLRSLAKLMLNSFWGKFGQRNKLTKVELVTESKRFFKLLGCRSNVVKNVQMVNE 803
Query: 228 DDIATQTGFENPNYDLTKSINNTEIII 254
+ + + + +S NT ++I
Sbjct: 804 ESLEV---YYAHGEEFIESAKNTNVVI 827
>SB_51580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 104 SVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNI 144
++L+DV D + G P+L + D G LDD+DVV+ + +
Sbjct: 122 TLLDDV---DVVDGDPLLDDVDVDDDDGLLDDVDVVDGVTL 159
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/96 (20%), Positives = 39/96 (40%)
Query: 214 LNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVES 273
+ K+ + S + + F PN S N E +I + + + + + ++S
Sbjct: 1 MKKSEGNQRTLFQSWGKKSSSNFTRPNSPGCSSAYNLEEVIDLNEDDDDGLLAAALEMDS 60
Query: 274 IDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEP 309
ID STS P P S + ++ + +E+ P
Sbjct: 61 IDPGPSTSTRFPNNVPSNSSTSTNTTSNSIPVEIIP 96
>SB_7657| Best HMM Match : ResIII (HMM E-Value=0.0005)
Length = 219
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/96 (20%), Positives = 39/96 (40%)
Query: 214 LNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVES 273
+ K+ + S + + F PN S N E +I + + + + + ++S
Sbjct: 1 MKKSEGNQRTLFQSWGKKSSSNFTRPNSPGCSSAYNLEEVIDLNEDDDDGLLAAALEMDS 60
Query: 274 IDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEP 309
ID STS P P S + ++ + +E+ P
Sbjct: 61 IDPGPSTSTRFPNNVPSNSSTSTNTTSNSIPVEIIP 96
>SB_4676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 215 NKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPIN 259
N SNTNS+ SNS+ T N N + + NN I + I+
Sbjct: 27 NSNSNTNSKNSNSNTTTTTNNNNNNNNNNNNNNNNNRIPAARGIH 71
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 47 TIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVI----------DSSDC 96
T G + KD ++D+GG + R+ W + V +IF + + +
Sbjct: 181 TTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEM 240
Query: 97 SRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
+R+ E + + + ++ + +++ NK+D
Sbjct: 241 NRMMESMKLFDSICNNKWFTDTSIILFLNKKD 272
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 222 SQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESI 274
SQ S+ + A T + T S+N T I+ PI +++S I ESI
Sbjct: 774 SQTSSYHEFANLTATQTQGEKQTLSLNETIQILPSPITVGTTAVESVIVSESI 826
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 19 LILIGLDNAGKTKTVNNLVGDK-DDKVLPTIG--FKAVNLVHKDTPVT--IYDLGGGPNF 73
L++IG GKT + D + T+G FK + D V I+D G +
Sbjct: 24 LLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERY 83
Query: 74 RQIWPQYYSEVHGVIFVID 92
R I YY G I + D
Sbjct: 84 RTITTAYYRGAMGFILMYD 102
>SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7)
Length = 122
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 198 RVQTDIHADLERRKRMLNKASNTNSQMSNSDDIATQ-TGFENPNYDLTKSINNTEIIIVK 256
R + + A R + K N NS ++SD+ + T + N N LT S N T + K
Sbjct: 5 RNKNSLTASSNETNRKMTKNRNKNSMTASSDETTRKMTKYRNKN-SLTASSNETNRKMTK 63
Query: 257 PINHNQNSIDSTIT 270
N N + S T
Sbjct: 64 YRNKNSLTASSNKT 77
>SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1)
Length = 607
Score = 29.5 bits (63), Expect = 5.5
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 182 HWLLNYIIRRYG------DINLRVQTDIHADLERRKRM--LNKASNTNSQMSNSDDIATQ 233
+W+L+Y++RR D LR+ T + +LE R + L K T + + D ++
Sbjct: 95 YWVLSYVVRRKDSRDFEQDTLLRIHTTLRRNLEARYLLSTLKKHLETPERNTVQDSQSSL 154
Query: 234 TGFE---NPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLS 288
TG N + ++ T +++ I + + +S + D++E+ + +P+ S
Sbjct: 155 TGQHCSINTSTGALRTSELTHYMLILHIAMDDSDDESDVGSGPSDHNEAPTRKRPRTS 212
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 65 YDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLA 124
+D+GG N +Y+ ++G+I V D ++ R L +VL+ + K +
Sbjct: 65 WDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLN----ASKDLYGAN 120
Query: 125 NKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLV 157
NKQ + D++E+ + E + P +V
Sbjct: 121 NKQKDSWFGFTTDIIEEYDPEQFAGN-QIPVIV 152
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 202 DIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPIN 259
D + ++E RK+ S N+ + N++D T FE Y ++INN+ +I + +N
Sbjct: 2030 DGNENVEARKQFAE--SGQNASLENAED----TNFETSIYSSDQNINNSSVIEQRDVN 2081
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 294 ASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKNR--PQSSPTLKKIKTEPHS 351
A+ +P +I + P++ R+L P V KS + D K+R + PT K +T+ +
Sbjct: 732 ATQAPRREIQVLRYRPRNGPRQLRPGVTEKSLSGKIADGKHRETKEKRPTASKSETKAAT 791
Query: 352 KNSS 355
+S
Sbjct: 792 NGAS 795
>SB_55319| Best HMM Match : Hexapep (HMM E-Value=0.16)
Length = 224
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 104 SVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNI 144
++L+DV D + G P+L + D G LDD+DVV+ + +
Sbjct: 58 TLLDDV---DVVDGDPLLDDVDVVDDFGLLDDVDVVDDVGL 95
>SB_51702| Best HMM Match : SURF6 (HMM E-Value=4)
Length = 260
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 194 DINLRVQTDIHADLERRKRMLNKASNTN-SQMSNSDDIATQTGFENPNYDLTKSINNTEI 252
D+N V A+LE+RK+ + + T+ S+M +S + T ++ + TK + +++
Sbjct: 89 DLNKHVARSFIAELEKRKQTGKEGTGTDASEMQDSGAVNT---CQSDKHVFTKHVAESKV 145
Query: 253 IIVKPINHNQNSI 265
++ P +H + +
Sbjct: 146 VL-SPSSHGKQGV 157
>SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18)
Length = 417
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 194 DINLRVQTDIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEII 253
D++ R + + ++ + A +Q SNS+ + G + + + +EI+
Sbjct: 193 DLSTRTEQKNAKYADGYEKEIENAQTNENQQSNSNYKGSSDGNKVKYAEEFEREVESEIM 252
Query: 254 IVKPINHNQNSIDSTITVESI 274
KPIN N+ S + T E++
Sbjct: 253 HAKPINQNKKSNNDKATTENV 273
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 218 SNTNSQMSNSDDIATQTGFENPNYDLTK-SINNTEIIIVKPINHNQNSIDSTITVESIDN 276
+N N++ +N+DD + +N N + K S NN++ ++N + ++I SI+N
Sbjct: 158 NNNNNKSNNNDDDKNNSKDDNNNNNGNKNSNNNSDSDYNNNKDNNDDENSNSIDENSINN 217
Query: 277 SESTSCGKPKL 287
S+ + K+
Sbjct: 218 SQGCNNNNDKV 228
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 15 RQIVLILIGLDNAGKTK-TVNNLVGDKDDKVLPTI-GF--KAVNLVHKDTPVTIYDLGGG 70
++ ++++G GK+ TV + G +K PTI F K + + + + + I D G
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGT 61
Query: 71 PNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQD 128
F + Y G + V + + + + +L P++++ NK D
Sbjct: 62 EQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSD 119
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 28.7 bits (61), Expect = 9.6
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 216 KASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESID 275
K+ N+NS SNSD N N D KS N+ K ++N +S +S + D
Sbjct: 34 KSDNSNSDNSNSD---------NSNSDKLKSDNSNS---EKLNSNNSDSNNSNSDNSNSD 81
Query: 276 NSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKN 334
NS S + KL + NS +D +K+ + N + N + D N
Sbjct: 82 NSNSDNSNSDKLKLVNSNPDNS-NSDKLKLVNSNSDKLNSDNSNSDNSNSDNSNSDNSN 139
>SB_10790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 336 PQSSPTLKKIKTEPHSKNSSMVEDKSDTSYVG 367
PQS + I+TE H+ S VE +D Y G
Sbjct: 141 PQSEDHITAIRTELHASRSGPVEPPADALYCG 172
>SB_6145| Best HMM Match : Hexapep (HMM E-Value=2.2)
Length = 261
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 79 QYYSEVHGVIFVIDSSD---CSRLDECRSVLEDV-LSHDRISGKPVLVLANKQDKTGALD 134
+Y V GV ++D D C L + V +DV L +D G +L + D T LD
Sbjct: 195 EYVDVVDGVTTMLDDVDVVDCDTLLDDVDVEDDVTLLNDVDVGDGATLLDDVDDDT-LLD 253
Query: 135 DIDVVE 140
D+DVVE
Sbjct: 254 DVDVVE 259
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 285 PKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMD-FKNRPQSSPTLK 343
PK SP R + + + PK++ K S + GN+ D + +P+ P K
Sbjct: 27 PKTSPKTRRKTGRKTSPKTSPKTSPKTS-PKTSQKQAGRQAGNKPEDRTEYKPEDKPVEK 85
Query: 344 KIKTEPHSKNSSMVEDKSD 362
K + +P ++ EDK +
Sbjct: 86 KPEGKPENQPEKKPEDKPE 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,741,521
Number of Sequences: 59808
Number of extensions: 651631
Number of successful extensions: 1960
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 138
length of query: 429
length of database: 16,821,457
effective HSP length: 84
effective length of query: 345
effective length of database: 11,797,585
effective search space: 4070166825
effective search space used: 4070166825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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