Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000149-TA|BGIBMGA000149-PA|IPR000938|CAP-Gly,
IPR001611|Leucine-rich repeat
(532 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 60 8e-10
SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofacto... 47 8e-06
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 45 2e-05
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 42 2e-04
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 31 0.53
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 30 0.70
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 30 0.70
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 30 0.92
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 28 2.8
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 28 3.7
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 28 3.7
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 27 4.9
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 27 6.5
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 60.1 bits (139), Expect = 8e-10
Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 13/276 (4%)
Query: 123 IEMVGFEKIHQKQKFDRLLEVCVHD----QNVSRAGDVSSLCPNVRSLDVSRNLFSNWRE 178
+E GFEKI KQ+ + L V + D +++ + S + P V LD+SRNLF +
Sbjct: 99 VEFCGFEKIQSKQRDLKSLRVIILDNYRIEDIEIEYEYSKILPEVIDLDLSRNLFHEFFP 158
Query: 179 VIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSH 238
+++L +QLP LR+L + N I + + L +++++ C D+ ++
Sbjct: 159 ILKLCSQLPSLRNLTLDSNLF----SNFISSNTVLLIPHLTQLSVNGCGLNSKDVQWITE 214
Query: 239 LWPKIHEIIAAYNRIDEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDC 298
+P + + N I + N + +S + A+++ +N+
Sbjct: 215 TFPSLEVLYLEANEIILSKATSFKNLQFLQTLSLANNLNLYS--ADGYAVDV-FQGINNL 271
Query: 299 LIAEIRFGDDWNQRVETFKNLEILFLNRNRINDWRXXXXXXXXXXXXXXXXXXNPIQTTE 358
++ D V T L L ++ N I D R + +
Sbjct: 272 NLSSTSLADVAELPVHTLHKLTFLDISENNIRDIRSLDHLRTLENLKHLRITLS--YFNK 329
Query: 359 DYDTGSQLVVAKIGTLQELNGSIITGELRRGAEYDY 394
D LV+A+I +L +LN I+ R AE Y
Sbjct: 330 PTDIAKLLVIARIPSLVKLNDVNISPNERLDAELYY 365
>SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofactor
B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 26 FGTVRYIGEVQGYKG--LWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSFVRPNKI 81
+GT+RYIG V LW G+E+D E GK+DG + G +YF +K GSF+R +++
Sbjct: 165 YGTIRYIGLVPEINNDNLWVGVEFD-EPVGKNDGTVSGKRYF-NAKNKHGSFLRSSEV 220
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 16 IGSRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 75
+G V + G VR+ G G+W G+E N +GK+DG + G +YF K G F
Sbjct: 6 VGDEVLIRGELGIVRFAGSTDFESGIWLGVELLN-GKGKNDGSVKGKRYFSCEK-GKGIF 63
Query: 76 VR 77
VR
Sbjct: 64 VR 65
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 27 GTVRYIGEVQGYKGLWYGIEWDNE--SRGKHDGCLDGIQYFKT-SKPSAGSFV 76
G VRY GEV+ KG++ G+E E GK+ G +DG +YFKT + G FV
Sbjct: 16 GFVRYAGEVENRKGVYVGLELLPEFAEFGKNRGVVDGREYFKTKNNEKTGIFV 68
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 30.7 bits (66), Expect = 0.53
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 141 LEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRML 200
LE ++D ++ A +++ NV SLD ++ LF++ R +I + L + R +D R++
Sbjct: 443 LEYLIYDYKIA-ALELTPTVANVISLDENKELFTSVRMLITIGELLTN-RIIDFWGERLV 500
Query: 201 -IDAPTEILAQLSINFSK 217
PTE +++N SK
Sbjct: 501 NAYGPTEAAIHVTLNPSK 518
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 40 GLWYGI---EWDNESRGKHDGCLDGIQYFKTSKPSAGSFVRPNKIIPSK 85
GL + I WD S G C Q+F P+A +F+ P ++ P++
Sbjct: 420 GLMFAILAGSWDTISTGGRFACFVIAQFFSNFGPNATTFLYPAEVFPAR 468
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 30.3 bits (65), Expect = 0.70
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 139 RLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNR 198
R++++ + +++ +S LCP++ L + N E+ L+ +RDL+ +NR
Sbjct: 604 RIIQLDISRRHLDSLIGLSELCPSIEELTLEGN------EIAYLTGCPVTIRDLNAVENR 657
Query: 199 M-LIDAPTEI--LAQLSINFSKLEKI-NLSVCDYTWTDILKLSHLW--------PKIHEI 246
+ + + + + L L I++++LE + LS + + +HLW + ++
Sbjct: 658 LSSLTSFSNLLNLQYLDISYNQLEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKL 717
Query: 247 IAAYNRIDEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDCLIAEIR 304
A NRI E+ N I E+ +L NL VL L++ + ++
Sbjct: 718 SACNNRIKELSFTNSNLHRLEELLLGNNEIEEIEEISSL--QNLMVLQLDNNKLTNLK 773
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 29.9 bits (64), Expect = 0.92
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 433 EDSLLVKLPKITTLTSQLL--EVTLRD-ENGKSFKKKFPSTMAVQKLITLSQRLFSRAGN 489
E+ L++LP T+ +L E+ LR EN + K + + +K+ T++ RL R N
Sbjct: 177 EEDELLELPPETSGRKKLTPEEMALRRIENARRRKNQSERRLEEEKMETIN-RLLKRQSN 235
Query: 490 TGTPR 494
TG PR
Sbjct: 236 TGKPR 240
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 415 FDAEHCRFEELIRKYGIPEDSLLVKLPKITTL----TSQLLEVTLRDENGKSFKKKFPST 470
+D + R E+L +Y + ED + V K+T +Q + V++ DE + K F
Sbjct: 67 YDPQPTRIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQYVPVSVVDELSTEYLKNFKCV 126
Query: 471 MAVQKLIT 478
+ + +T
Sbjct: 127 VVTETSLT 134
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 47 WDNESRGKHDGCLDGIQYFKTSKPSAGSFVRPNKIIPSKTCA 88
W+ S G C+ Q+F P+ FV P ++ PS+ A
Sbjct: 451 WETISTGGRFACVALAQFFFNFGPNTTCFVIPAEVFPSRVRA 492
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 477 ITLSQRLFSRA-GNTGTPRLYVLDEQMDGAEIYLDNSMKDLAYYSIKNGDVILVK 530
+TL + L S+A G+T +L A I DN ++ I+ GD+ILVK
Sbjct: 290 VTLGRYLESKAKGSTSAALSQLLSLAPSSATIIEDNEQIEILADLIERGDLILVK 344
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 27.5 bits (58), Expect = 4.9
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 415 FDAEHCRFEELIRKYGIPEDSLLVKLPKITTLTSQLLEVTLRDENGKSFKKKFPSTMAV- 473
F +H FE L+ + S +PK+T + L + K K K S+++V
Sbjct: 355 FPKQHTCFEALLSAW-----STTFTIPKLTETRLAAISSILEEFELKDIKDKPLSSISVG 409
Query: 474 -QKLITLSQRLFSRAGNTGTPRLYVLDEQMDGAE 506
Q+ I LF RA PRL VLDE G +
Sbjct: 410 MQRFI-----LFCRA-IVKQPRLVVLDEPFQGVD 437
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 6.5
Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Query: 59 LDGIQYFKTSKPSAGSFVRPNKIIPSKTCAEAIRQYYGDPEDETLAAHRRTIINEWKREM 118
LD Q+ K K S + + + +KT A + D ++ + + R+
Sbjct: 75 LDAFQFMKDHKLDKASIIGHS--MGAKT-AMVTALKWPDKVEKLVVVDNSPWYQDLPRDY 131
Query: 119 GAPFIEMVGFEK--IHQKQKFDRLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNW 176
GA F +M+ ++ I + + D+++ D V S L N++ + N F
Sbjct: 132 GAYFRKMIQIDEANITKYSEADKMMSTVEKDILVR-----SFLLSNLKKDSNNSNTFKFR 186
Query: 177 REVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINF 215
+ +S L + S N ++ D+PT ++ L F
Sbjct: 187 VPIELISKSLKTIEGFPASLNDLVYDSPTLVIRALKAPF 225
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,333
Number of Sequences: 5004
Number of extensions: 97694
Number of successful extensions: 253
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 241
Number of HSP's gapped (non-prelim): 15
length of query: 532
length of database: 2,362,478
effective HSP length: 76
effective length of query: 456
effective length of database: 1,982,174
effective search space: 903871344
effective search space used: 903871344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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