Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000149-TA|BGIBMGA000149-PA|IPR000938|CAP-Gly,
IPR001611|Leucine-rich repeat
(532 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0038 + 260080-260380,260852-261022,261764-261810,262266-26... 134 1e-31
04_04_1698 - 35458500-35458547,35458919-35458988,35459626-354597... 52 1e-06
01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847 34 0.32
08_02_0238 + 14665813-14668798,14669088-14669125 33 0.57
05_04_0370 + 20700734-20700803,20704224-20704257,20704326-207045... 33 0.75
02_01_0407 - 2963907-2964063,2965158-2965311,2965427-2968527,296... 33 0.75
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 31 1.7
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 31 2.3
02_02_0454 + 10436491-10436820,10437487-10437570,10437667-104377... 31 2.3
02_02_0034 - 6246183-6246553,6246672-6249699 31 2.3
11_04_0060 + 12984831-12985218,12985364-12985753,12986090-12986478 31 3.0
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 31 3.0
06_03_1174 - 28164003-28164350,28164504-28164680,28165147-28166178 31 3.0
05_06_0133 + 25905455-25905545,25905650-25906202,25906310-259068... 31 3.0
05_04_0277 + 19684956-19686137 31 3.0
01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135... 31 3.0
01_07_0231 + 42176598-42178117,42178232-42179753 30 4.0
01_06_0460 + 29545030-29546377,29546463-29547085 30 4.0
09_04_0164 + 15265878-15268701,15268782-15269200 30 5.3
05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320 30 5.3
04_04_1372 + 33008740-33009130,33009485-33011544 30 5.3
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 29 7.0
11_01_0605 + 4821363-4823246 29 7.0
03_03_0240 - 15741024-15741197,15741531-15741710,15742782-157430... 29 7.0
01_01_0361 + 2838979-2841745,2841897-2842285 29 7.0
12_01_0991 - 10057736-10058249,10058412-10059241,10059266-100606... 29 9.2
12_01_0772 - 7016864-7017012,7017114-7017262,7017346-7017489,701... 29 9.2
11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475 29 9.2
10_02_0109 - 5368342-5369592 29 9.2
07_03_1625 - 28219006-28219041,28219150-28219227,28219318-282193... 29 9.2
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 29 9.2
03_01_0640 - 4683970-4684481,4685197-4685343,4685606-4686764,468... 29 9.2
02_02_0199 - 7710487-7710804,7710907-7711298,7711543-7711878,771... 29 9.2
02_01_0405 - 2952434-2955583 29 9.2
>05_01_0038 +
260080-260380,260852-261022,261764-261810,262266-262412,
262495-262569,262826-262935,263032-263159,263368-263429,
263599-263748,263827-263861,264083-264151,264538-264629,
264718-264794,265434-265532
Length = 520
Score = 134 bits (325), Expect = 1e-31
Identities = 128/489 (26%), Positives = 206/489 (42%), Gaps = 50/489 (10%)
Query: 16 IGSRVKCNDD---FGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSA 72
+G RV D GTVRY+G V G+ G W G++WD + G+HDG L G +YF + +
Sbjct: 8 LGQRVHAAGDPARVGTVRYLGPVDGHPGDWLGVDWDAGAGGRHDGSLAGRRYFVAAGERS 67
Query: 73 GSFVRPNKIIPSKTCAEAIRQYYGDPEDETLAAHRRTIINEWKREMGAPFIEMVGFEKIH 132
SF RP + T +AIR Y E + + ++ + +E+VG K+
Sbjct: 68 ASFARPTALSAGITLPDAIRNRYRVEEFTKEEQDEMYVFSSSQKRVS---VELVGKNKVE 124
Query: 133 QKQK-FDRLLEVCVHDQNVSRAG---DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPD 188
+K K + L V VS G ++ +L PN+R LD++ NL S W+++ L L
Sbjct: 125 EKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNLRQLDLTGNLLSQWQDIFSLCEALAS 184
Query: 189 LRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIA 248
L LD++ N M D S + + + L+ C TW + K+ + + E+
Sbjct: 185 LEILDLTNNTMENDFTD------SSSVKNIRVLVLNYCGVTWELVEKIKVSFSCLSELHL 238
Query: 249 AYNRI----DEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGAL-NLKVLSLNDCLIAEI 303
NRI + + N I SW E++ L L +L+ L LN ++ +
Sbjct: 239 MTNRIKAMMTPVGNIVQGFDTLRLLNLEDNHIDSWDEIVKLSYLRSLEQLHLNKNMLKHV 298
Query: 304 RF-------GDDWNQRVETFKNLEILFLNRNRIND---------------WRXXXXXXXX 341
+ G + V F+ L +L L N+I++ W
Sbjct: 299 TYPSNPPPLGSLGDAAVLPFEKLRVLLLGSNQIDEVLSVDSLNLFPSLTLW-LSTPILIS 357
Query: 342 XXXXXXXXXXNPIQTTEDYDTGSQLVVAKIGTLQELNGSIITGELRRGAEYDYLKRYGGE 401
NP+ +++A++G ++ LNGS I+ RR AE Y++ G
Sbjct: 358 TFLKDVRLSDNPVADPAKGGVPRFVLIARLGKVKILNGSEISPRERREAEIRYVRLVMG- 416
Query: 402 WKVAQLDFEAKAAFDAEHCRFEELIRKYGIPEDSLLVKLPKITTLTSQLLEVTLRDENGK 461
K D E H RF EL +GI ++ + + S L+ +TL+ G
Sbjct: 417 -KAESYDPE---EIKRLHPRFAELKAFHGIEDEKPSSRTSGPQKMASGLISITLKCV-GP 471
Query: 462 SFKKKFPST 470
S +K P T
Sbjct: 472 SMGEKQPLT 480
>04_04_1698 -
35458500-35458547,35458919-35458988,35459626-35459759,
35460671-35460712,35460786-35460824
Length = 110
Score = 52.0 bits (119), Expect = 1e-06
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 13 NVYIGSR--VKCNDDFGTVRYIGEVQGY-KGLWYGIEWDNESRGKHDGCLDGIQYFKTSK 69
N+ +G R V+ GTV+++G + +G W G+++D E GKHDG + GI++F+ +
Sbjct: 25 NIKVGDRCEVEPGAKRGTVKFVGRAEALGRGFWVGVQYD-EPLGKHDGMVKGIRFFECPQ 83
Query: 70 PSAGSFVRPNKI 81
G+ VRP K+
Sbjct: 84 -GHGAIVRPEKV 94
>01_06_1168 - 35073599-35073628,35075574-35076993,35077466-35078847
Length = 943
Score = 33.9 bits (74), Expect = 0.32
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 165 SLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQL-SINFSKLEKINL 223
SL + RN S + L A LP LR LD+S NR+ P E+ AQ SI L + L
Sbjct: 99 SLSLPRNNLSG-PVLPGLLAALPRLRSLDLSSNRLAAPVPAELFAQCRSIRALSLARNEL 157
Query: 224 S 224
S
Sbjct: 158 S 158
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 33.1 bits (72), Expect = 0.57
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 154 GDVSSLCPNVRSLDVSRNLFSNWREVIQLS-AQLPDLRDLDVSKNRMLIDAPTEILAQLS 212
G + S N SL + ++++ I +S ++LP+L++LD+S N + P I
Sbjct: 299 GTIPSSLGNFSSLRLLYLAANHFQGSIPVSISKLPNLQELDISYNYLPGTVPPSI----- 353
Query: 213 INFSKLEKINLSVCDYTWTDILKLSHLWPKIHEII 247
N S L ++L+V D+T T + + P I +I
Sbjct: 354 FNISSLTYLSLAVNDFTNTLPFGIGYTLPNIQTLI 388
>05_04_0370 +
20700734-20700803,20704224-20704257,20704326-20704514,
20705258-20705606,20705681-20705822,20706115-20706494
Length = 387
Score = 32.7 bits (71), Expect = 0.75
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 136 KFDRLLEVCVHDQNVSRAGD-----VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLR 190
KF +L +V QN+ + D VS+ C ++R LD+SR+ + R + L+ P L
Sbjct: 113 KFTKL-QVLTLRQNIPQLEDSAVEAVSNYCHDLRELDLSRSFRLSDRSLYALARGCPQLT 171
Query: 191 DLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTD 232
L++S D L L+ + + +NL C TD
Sbjct: 172 KLNISGCSNFSDT---ALTYLTFHCKNFKCLNLCGCGKAATD 210
>02_01_0407 -
2963907-2964063,2965158-2965311,2965427-2968527,
2968684-2968697
Length = 1141
Score = 32.7 bits (71), Expect = 0.75
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 129 EKIHQKQKFDRLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPD 188
E I + +K + LL H+ S C N++++D+ N FS I S LP+
Sbjct: 292 ESIGELKKLEELL--LGHNNMYGEVPSTLSNCTNLKTIDIKSNSFSGELSKINFST-LPN 348
Query: 189 LRDLDVSKNRMLIDAPTEI 207
L+ LD+ N P I
Sbjct: 349 LQTLDLLLNNFNGTIPQNI 367
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 31.5 bits (68), Expect = 1.7
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 162 NVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKI 221
N+ S+D+S NW V+ QLP LR L++S + + L L NF++LE++
Sbjct: 194 NLNSVDLSA--VDNWLHVMN---QLPSLRVLNLSN--CSLQRADQKLTHLHNNFTRLERL 246
Query: 222 NLS 224
+LS
Sbjct: 247 DLS 249
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 31.1 bits (67), Expect = 2.3
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 139 RLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNR 198
RLL++ + +SR G + C +++ L + N S EV L +L L+ LD+ N+
Sbjct: 600 RLLDISYN--RISRIGHGLASCSSLKELYLGGNKIS---EVDGLH-RLLKLKVLDLRHNK 653
Query: 199 MLIDAPTEILAQLSINFSKLEKINL 223
+ + ++ L QL+ N+S LE +NL
Sbjct: 654 I---STSKGLGQLAANYSSLEAVNL 675
>02_02_0454 +
10436491-10436820,10437487-10437570,10437667-10437797,
10437873-10437948,10438366-10438436,10438559-10438645,
10438725-10438797,10438881-10438948,10439020-10439088,
10439160-10439265,10439831-10439887,10440297-10440389
Length = 414
Score = 31.1 bits (67), Expect = 2.3
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 148 QNVSRAG--DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPT 205
Q VS G ++SLCPN+R+L + + + + + DL++S + + D
Sbjct: 155 QKVSDKGIETITSLCPNLRALSIYWIVGLTDLTIRHIVQNCKHIVDLNLSGCKNISDKGM 214
Query: 206 EILAQLSINFSKLEKINLSVC 226
+++A N+ L+K+N++ C
Sbjct: 215 QLVAD---NYEGLKKLNITRC 232
>02_02_0034 - 6246183-6246553,6246672-6249699
Length = 1132
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 154 GDVSSL---CPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQ 210
GD+ S C + L + NL + + Q L +++LD+S+NR+ P E L
Sbjct: 649 GDIPSTLGKCVLLEYLHMEGNLLTG--SIPQSFMNLKSIKELDLSRNRLSGKVP-EFLTL 705
Query: 211 LSINFSKLEKINLSVCDYTWT 231
FS L+K+NLS D+ T
Sbjct: 706 ----FSSLQKLNLSFNDFEGT 722
>11_04_0060 + 12984831-12985218,12985364-12985753,12986090-12986478
Length = 388
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 18 SRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSFVR 77
SR C + Y+G GY G W N+ R + G +GI S SA V+
Sbjct: 222 SRNDCAETREEAMYMGNNNGYCPQG-GQGW-NQPRPYYQGEANGIAKEALSNDSADKEVQ 279
Query: 78 PNKIIPSKTC 87
P K +P + C
Sbjct: 280 PEKTVPQEYC 289
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 30.7 bits (66), Expect = 3.0
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 161 PNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEK 220
P+V ++D+SR+ + L A P+L DLD+S L DA +A+ +L++
Sbjct: 110 PSVSAVDLSRSRGFGAAGLAALVAACPNLTDLDLSNGLDLGDAAAAEVAKA----RRLQR 165
Query: 221 INLSVC 226
++LS C
Sbjct: 166 LSLSRC 171
>06_03_1174 - 28164003-28164350,28164504-28164680,28165147-28166178
Length = 518
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 134 KQKFDRLLEVCVHDQNVS--RAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRD 191
+Q+F+ L E+C H ++ +V + CPN+R LD+ R+ F + + +S P L
Sbjct: 200 QQRFNELSEICFHFVSIESYMLRNVITRCPNLRVLDL-RSCFD--LDAVAISPGGPKLSS 256
Query: 192 LDVS 195
L ++
Sbjct: 257 LTIA 260
>05_06_0133 +
25905455-25905545,25905650-25906202,25906310-25906806,
25906905-25907043,25907182-25907253,25907344-25907415,
25907503-25907583,25907899-25908065,25908148-25908416,
25908512-25908638,25908752-25908820,25908928-25909120,
25909215-25909707
Length = 940
Score = 30.7 bits (66), Expect = 3.0
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 97 DPEDE---TLAAHRRTIINEWKREMGAPFI-EMVGFEKIHQKQKFDRLLEVC-VHDQNVS 151
DPED T + ++ W MG P + +M+ ++K+ + ++ +
Sbjct: 377 DPEDVAAITAIKEKYQVVKNW---MGDPCVPKMLAWDKLTCSYAISNPARIIGLNLSSSG 433
Query: 152 RAGDVSSLCPN---VRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEIL 208
+G+VSS N +++LD+S N + + +QLP L LD++ N++ P+ +L
Sbjct: 434 LSGEVSSYFGNLKAIQNLDLSNNKLTG--PIPDALSQLPSLTFLDLTGNQLSGSIPSGLL 491
Query: 209 AQL 211
++
Sbjct: 492 KRI 494
>05_04_0277 + 19684956-19686137
Length = 393
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 158 SLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI 213
S C N+R L VS+NL S ++ L +LR LDVS N++ P I SI
Sbjct: 116 SSCRNLRFLAVSKNLISG--QIPDGLGGLSNLRTLDVSFNQISGTIPASIATLPSI 169
>01_01_0154 -
1355601-1356102,1356197-1356389,1356465-1356520,
1356997-1357066,1357188-1357314,1357418-1357695,
1357908-1358065,1358166-1358246,1358339-1358410,
1358531-1358602,1358729-1358867,1358987-1360045,
1360170-1360257
Length = 964
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 149 NVSRAG---DVSSLCPNVRSL---DVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLID 202
N+S +G D+SS N+++L D+S N + + + +QLP LR LD++ N++
Sbjct: 430 NLSSSGLSADISSAFGNLKALQYLDLSNNSLTG--SIPDVLSQLPSLRVLDLTGNQLSGS 487
Query: 203 APTEILAQL 211
P+ IL ++
Sbjct: 488 IPSGILKRI 496
>01_07_0231 + 42176598-42178117,42178232-42179753
Length = 1013
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 163 VRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEI 207
+R+LD+SRN FS V A L +L+ +D+S NR P++I
Sbjct: 216 LRALDLSRNQFSG--TVTTGIANLHNLKTIDLSGNRFFGAVPSDI 258
>01_06_0460 + 29545030-29546377,29546463-29547085
Length = 656
Score = 30.3 bits (65), Expect = 4.0
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 155 DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEI 207
D S+L P+++ L +S N FS + +L LR LD+S NR+ P EI
Sbjct: 123 DFSTLAPHLKLLYLSGNGFSG--RFPESVLRLRHLRRLDLSGNRLTCTIPPEI 173
>09_04_0164 + 15265878-15268701,15268782-15269200
Length = 1080
Score = 29.9 bits (64), Expect = 5.3
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 157 SSLC--PNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSIN 214
+S+C PN++ LD+SRN + V + L +LD+S N + P+ I L ++
Sbjct: 438 TSICWLPNLQQLDLSRNSLTG--AVPACISNATSLGELDLSSNALSGSIPSSI-GSLKLS 494
Query: 215 FSKLEKINLS 224
+ L + LS
Sbjct: 495 YLSLHRNQLS 504
>05_04_0315 - 20139544-20140545,20140674-20141547,20142313-20142320
Length = 627
Score = 29.9 bits (64), Expect = 5.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 160 CPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLE 219
C ++ LD+S N F+ +S Q+P L LD+S NR P I +N L+
Sbjct: 117 CTSMTGLDLSSNNFTGLIPQ-DISQQIPYLTSLDLSYNRFSGQIPVNISNMTYLNTLNLQ 175
>04_04_1372 + 33008740-33009130,33009485-33011544
Length = 816
Score = 29.9 bits (64), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 155 DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI 213
++SS+ PN+ LDVS N S E+ + + LD+S N + + P +L + I
Sbjct: 332 NISSVFPNMSFLDVSSNTISG--EIPSSLCNITRMEYLDLSNNSLSGELPNCLLTEYPI 388
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 29.5 bits (63), Expect = 7.0
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 161 PNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEK 220
P V ++D+SR+ + L A P+L DLD+S L DA +A+ +L++
Sbjct: 110 PFVSAVDLSRSRGFGAAGLAALVAAFPNLTDLDLSNGLDLGDAAAAEVAKA----RRLQR 165
Query: 221 INLSVC 226
++LS C
Sbjct: 166 LSLSRC 171
>11_01_0605 + 4821363-4823246
Length = 627
Score = 29.5 bits (63), Expect = 7.0
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 150 VSRAGDVSSLCP--NVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEI 207
+S A ++S+C +RSL++SRN F++ + +L+ LD+S N ML +
Sbjct: 94 LSNATILASICNLHTLRSLNLSRNSFTDLPSQLSPCPMKAELQVLDLSSN-MLSGQLGDF 152
Query: 208 LAQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAAYN 251
+ F KLE ++LS +LS L PK+ + + N
Sbjct: 153 -----VGFHKLEVLDLSSNSLNGNISTQLSDL-PKLRSLNLSSN 190
>03_03_0240 -
15741024-15741197,15741531-15741710,15742782-15743040,
15743120-15743355,15743667-15743732,15744540-15744623
Length = 332
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 399 GGEWKVAQLDFEAKAAFDAEHCRFEELIRKYGIPEDSLLVKLPKITTLTSQLL 451
G +W Q + K FD+ C LI++Y + +D+L+VK K + L +++
Sbjct: 17 GEDWWCYQFGNKKKGIFDSLACD-PLLIKEYDVGQDALIVKSSKKSPLALRMV 68
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 29.5 bits (63), Expect = 7.0
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 136 KFDRLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLS-AQLPDLRDLDV 194
K L+EV ++ N S +G + S N+ +L+ ++N I S +L L LD+
Sbjct: 419 KLSNLVEVALY--NTSLSGLIPSSIGNLTNLNRLYAYYTNLEGPIPASLGKLKTLFVLDL 476
Query: 195 SKNRMLIDAPTEILAQLSINF 215
S NR+ P EIL S+++
Sbjct: 477 STNRLNGSIPKEILELPSLSW 497
>12_01_0991 -
10057736-10058249,10058412-10059241,10059266-10060633,
10061785-10062327,10066274-10066498,10066590-10066640
Length = 1176
Score = 29.1 bits (62), Expect = 9.2
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 163 VRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKIN 222
+R LD+S N F NW ++ LP LR L++S P ++ N SKL ++
Sbjct: 401 LRYLDLSCNNF-NWSQIPVFLGSLPSLRYLNLSYGFFYGSVPPQL-----GNLSKLAYLD 454
Query: 223 LSVCDYTWTDILKLSHLW 240
L+ Y++ + ++ W
Sbjct: 455 LT--SYSYNQLYSVALSW 470
>12_01_0772 -
7016864-7017012,7017114-7017262,7017346-7017489,
7017549-7017719,7017907-7018020,7018115-7018215,
7018296-7018416,7018601-7018830,7019203-7019265,
7019528-7019570,7019860-7019953,7020428-7020501,
7020616-7020744,7020940-7021017,7021353-7021639
Length = 648
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 178 EVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSK---LEKINLSVCDYTWTDIL 234
++ ++ ++P+LRDLD+S N ++ + ++ +S K L ++ CD T +
Sbjct: 418 DLCKILVKMPNLRDLDISDNPIMDEGIRLLICFISRTLRKEKSLSRLRAENCDLTNIGVT 477
Query: 235 KLSHLWPKIHE 245
+L + E
Sbjct: 478 ELLECLSSVSE 488
>11_02_0072 + 8015915-8015934,8016064-8016946,8017474-8018475
Length = 634
Score = 29.1 bits (62), Expect = 9.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 160 CPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLE 219
C ++ SLD+S N S +S QLP + +LD+S N + P + +N L+
Sbjct: 123 CSSMTSLDLSSNSLSGPIPA-DISKQLPFITNLDLSYNSFSGEIPESLANCTYLNIVNLQ 181
Query: 220 KINLS 224
L+
Sbjct: 182 NNKLT 186
>10_02_0109 - 5368342-5369592
Length = 416
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 389 GAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRF 422
G + +LK YG EW V LD +A F H R+
Sbjct: 360 GEGFVFLKHYGSEW-VFALDVQAMVLFRLPHRRY 392
>07_03_1625 -
28219006-28219041,28219150-28219227,28219318-28219389,
28219468-28219567,28219632-28219708,28219802-28219872,
28219987-28220066,28220143-28220194,28220376-28220431,
28220506-28220551,28220631-28220682,28220787-28220888,
28220967-28221021,28221101-28221180,28221271-28221321,
28221354-28221377,28221742-28221833,28221928-28222057,
28222156-28222230,28222433-28222543,28222637-28222693
Length = 498
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 144 CVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPD 188
C HD++++ G +L P V L+ ++NL E+++L+ +L +
Sbjct: 141 CFHDRDIAPDGKTLTLWPPVEGLETNKNL----DEIVELAKKLQE 181
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 29.1 bits (62), Expect = 9.2
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 184 AQLPDLRDLDVSKNRMLIDAP-----TEILAQLSINFSKLE-KINLSVCDYTWTDILKLS 237
+QLP+L+ LD+++N++ + P E+L L + + LE I+ +C T L LS
Sbjct: 159 SQLPNLKILDLAQNKLSGEIPRLIYWNEVLQYLGLRGNNLEGSISPDICQLTGLWYLDLS 218
Query: 238 H 238
+
Sbjct: 219 Y 219
>03_01_0640 -
4683970-4684481,4685197-4685343,4685606-4686764,
4686851-4686907
Length = 624
Score = 29.1 bits (62), Expect = 9.2
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 135 QKFDRLLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDV 194
++ RL + + +SR G S C +R L ++ N S+ ++ +L L +D+
Sbjct: 434 RELTRLRVLNLSYNKISRIGHGLSNCGAIRELYLAGNKISD----VEGLHRLLKLAVVDL 489
Query: 195 SKNRMLIDAPTEILAQLSINFSKLEKINL 223
S N++ T+ L QL N+S L +NL
Sbjct: 490 SFNKI---TTTKALGQLVANYSSLRALNL 515
>02_02_0199 -
7710487-7710804,7710907-7711298,7711543-7711878,
7711971-7711996,7712466-7712525,7712625-7712696,
7712784-7712927,7714165-7714236,7714350-7714482,
7714572-7714680
Length = 553
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 185 QLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLS 224
+L +L+ LD+S N+ + + P+ + +N+ +L+K NLS
Sbjct: 122 KLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNLS 161
>02_01_0405 - 2952434-2955583
Length = 1049
Score = 29.1 bits (62), Expect = 9.2
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 158 SLCPNVRSLDVSRNLFSNWREVIQLS-AQLPDLRDLDVSKNRMLIDAPTEI 207
S C +++ +D++ N FS E+I ++ + LP+L+ LD+ +N + P I
Sbjct: 322 SNCTSLKIIDLNNNNFSG--ELIYVNFSNLPNLKTLDLMRNNFSGEIPESI 370
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,685,012
Number of Sequences: 37544
Number of extensions: 590850
Number of successful extensions: 1558
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1530
Number of HSP's gapped (non-prelim): 62
length of query: 532
length of database: 14,793,348
effective HSP length: 85
effective length of query: 447
effective length of database: 11,602,108
effective search space: 5186142276
effective search space used: 5186142276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -