Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000149-TA|BGIBMGA000149-PA|IPR000938|CAP-Gly,
IPR001611|Leucine-rich repeat
(532 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 144 2e-34
U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical pr... 50 4e-06
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 49 7e-06
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 46 9e-05
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 42 0.001
U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical pr... 41 0.002
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 36 0.071
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z73896-7|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 32 1.2
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 32 1.2
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 32 1.2
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 31 2.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 31 2.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 31 2.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 31 2.0
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 31 2.7
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 31 2.7
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 31 2.7
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 30 3.5
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 30 3.5
AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical... 30 4.7
U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical ... 29 6.2
AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm rece... 29 8.2
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 144 bits (348), Expect = 2e-34
Identities = 137/529 (25%), Positives = 239/529 (45%), Gaps = 54/529 (10%)
Query: 16 IGSRVKCNDDFGTVRYIGEVQGYKGL-WYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGS 74
IG RV+ N + TVRYIGEV GY W G+EWD+ +RGKHDG + G +YF+T P+ GS
Sbjct: 3 IGQRVRINFEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNGGS 62
Query: 75 FVRPNKIIPSKT-CAEAIRQYYGDPEDETLAAHRRTIINEWKREMGAPFIEMVGFEKIHQ 133
++ ++I+P T I+ Y + E ++ E + IE++G ++
Sbjct: 63 LMK-HEIVPKPTDLLFEIKDRYIEEE---------SVETEIELAQSNKKIELIGMDQTAA 112
Query: 134 KQ-KFDRLLEVCVHDQNVSRAGDVSS----LCPNVRSLDVSRNLFSNWREVIQLSAQLPD 188
KQ ++L+ + + +++V S LC R L++ NL W+ V Q+ P
Sbjct: 113 KQSNIEKLINIVLDNRSVGFPPSSDSPQFILC---RELNLYGNLLYKWKTVRQILEYFPR 169
Query: 189 LRDLDVSKNRMLI----DAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIH 244
+++L++ +NRM + E + +K+ +S C+ + I + +P
Sbjct: 170 IQELNLRRNRMQCFNEEEDDDESEGDDHVYSDSCKKLVISECNLSENSIDSILLRFPSTS 229
Query: 245 EIIAAYNRIDEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDCLIAEIR 304
+++A N + + NP + + NL LS+ +C I +
Sbjct: 230 DVVAFGNDLTRFSVSEAVSSRLTSLDLEDNPFKTLDSIHGTFP-NLTQLSVANCGITSLN 288
Query: 305 FGDDWNQRVETFKNLEILFLNRNRINDWRXXXXXXXXXXXXXXXXXXNPIQTTEDYDTGS 364
G D + + F LE L + RN I +W+ + +TE
Sbjct: 289 -GFDGSIK---FPKLEYLNIKRNSIVEWKSVNSIRSLKSLKRLLFDCKKL-STEKGVHAY 343
Query: 365 QLVVAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEE 424
++V+AK+ TL +LN ++ RR AE +L +Y G L+ D +
Sbjct: 344 EIVIAKLSTLIDLNRFDVSEVERRSAEIRFLNKYAG------LNDNEDHQDD-----IKR 392
Query: 425 LIRKYGIPEDSLLVKLPKITTLTSQLLEVTLRDENGKSFK-KKFPSTMAVQKLITLSQRL 483
LI +G P + T L V +R E G + ++ P M++QK+ + RL
Sbjct: 393 LIEIHG---------EPTLDTAKKGLAVVKIRIECGNRVETRRLPLGMSIQKIRDMLARL 443
Query: 484 FSRAGNTGTPRLY-VLDEQMDGAEIYLDNSMKDLAYYS-IKNGDVILVK 530
F + NT RLY V+ E+ I L+N +++ +YS ++ D+++V+
Sbjct: 444 F-KVPNTSKIRLYLVMSEKAKQHRIELENPLREFGHYSPSEDRDILVVE 491
>U64598-3|AAK39213.1| 432|Caenorhabditis elegans Hypothetical
protein C52B9.3a protein.
Length = 432
Score = 50.0 bits (114), Expect = 4e-06
Identities = 68/313 (21%), Positives = 120/313 (38%), Gaps = 19/313 (6%)
Query: 134 KQKFDRLLEVCV-HDQNVSRAGD---VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDL 189
K R LE+ V ++ N+ GD +++L +V D+ N S W ++ + LP L
Sbjct: 39 KMASQRALELLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHL 98
Query: 190 RDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAA 249
R L++ N P + + S L I L+ + + + PK+ E+ +
Sbjct: 99 RVLNIGHN------PLNPVIDHELPVSTLHTIILNGTHLPFKTLQSFLSVLPKVTELHMS 152
Query: 250 YNRI-DEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDCLIAEIRFGDD 308
N+ D+ + + WS VMN+ V S+ + E D
Sbjct: 153 DNQFNDDDDCDEPISTTVRTVHLNRCGFLKWSSVMNVVKRFPNVCSV---FVCENPLKDV 209
Query: 309 WN-QRVETFKNLEILFLNRNRINDWRXXXXXXXXXXXXXXXXXXNPIQTTEDYDTGSQLV 367
+ + E L L + I+ W P+ + L+
Sbjct: 210 THCKHFEQLPFWNFLNLAKTSIDSWDSLDQLNRMTSISDLRVPNIPLLDALTNEERLHLI 269
Query: 368 VAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEELIR 427
+ ++ L+ LNGS I+ E R +E ++ RY E K L + K D +H E+L+
Sbjct: 270 IGRLHHLRVLNGSKISSEQREQSERFFI-RYYQEQKEKPLQY--KTLID-KHGNLEKLVT 325
Query: 428 KYGIPEDSLLVKL 440
P+ +VK+
Sbjct: 326 IDLTPKKEAVVKI 338
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 49.2 bits (112), Expect = 7e-06
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 9 GNDNNVYIGSRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTS 68
GN V +G+++ G V Y+G + +G+W G+++D E GK+DG + G++YF
Sbjct: 149 GNRCEVTVGAQMARR---GEVAYVGATKFKEGVWVGVKYD-EPVGKNDGSVAGVRYFDCD 204
Query: 69 KPSAGSFVRP 78
P G FVRP
Sbjct: 205 -PKYGGFVRP 213
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 45.6 bits (103), Expect = 9e-05
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 16 IGSRVKCNDDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 75
IG+RVK + G V + G+ Q +G W G+ D + GK++G + +QYF+ +P+ G F
Sbjct: 5 IGTRVKTSSGNGRVVFCGQTQFAEGDWVGVILDT-ATGKNNGTVQNVQYFE-CEPNFGVF 62
Query: 76 VRPNKI 81
V+ + +
Sbjct: 63 VKSSAV 68
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 27 GTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 75
G +RY+G + G G++ GIE E GKHDG G+ YF + P G F
Sbjct: 33 GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 27 GTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFKTSKPSAGSF 75
G +RY+G + G G++ GIE E GKHDG G+ YF + P G F
Sbjct: 33 GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79
>U64598-4|AAN72420.1| 418|Caenorhabditis elegans Hypothetical
protein C52B9.3b protein.
Length = 418
Score = 41.1 bits (92), Expect = 0.002
Identities = 69/313 (22%), Positives = 118/313 (37%), Gaps = 33/313 (10%)
Query: 134 KQKFDRLLEVCV-HDQNVSRAGD---VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDL 189
K R LE+ V ++ N+ GD +++L +V D+ N S W ++ + LP L
Sbjct: 39 KMASQRALELLVLNNMNIDTIGDSEKLATLASHVSEADLGWNQISKWSDIACILKNLPHL 98
Query: 190 RDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAA 249
R L++ N P + + S L I L+V PK+ E+ +
Sbjct: 99 RVLNIGHN------PLNPVIDHELPVSTLHTIILNVL--------------PKVTELHMS 138
Query: 250 YNRI-DEIEXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDCLIAEIRFGDD 308
N+ D+ + + WS VMN+ V S+ + E D
Sbjct: 139 DNQFNDDDDCDEPISTTVRTVHLNRCGFLKWSSVMNVVKRFPNVCSV---FVCENPLKDV 195
Query: 309 WN-QRVETFKNLEILFLNRNRINDWRXXXXXXXXXXXXXXXXXXNPIQTTEDYDTGSQLV 367
+ + E L L + I+ W P+ + L+
Sbjct: 196 THCKHFEQLPFWNFLNLAKTSIDSWDSLDQLNRMTSISDLRVPNIPLLDALTNEERLHLI 255
Query: 368 VAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEELIR 427
+ ++ L+ LNGS I+ E R +E ++ RY E K L + K D +H E+L+
Sbjct: 256 IGRLHHLRVLNGSKISSEQREQSERFFI-RYYQEQKEKPLQY--KTLID-KHGNLEKLVT 311
Query: 428 KYGIPEDSLLVKL 440
P+ +VK+
Sbjct: 312 IDLTPKKEAVVKI 324
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2 protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.071
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 243 IHEIIAAYNRIDEI-EXXXXXXXXXXXXXXDGNPITSWSEVMNLGALNLKVLSLNDCLIA 301
+H + YNRI + + DGNPI +W + M G +L+ LSL++C I
Sbjct: 255 LHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPIKAWRKEMFKGLDSLEELSLDNCNIE 314
Query: 302 EI 303
+
Sbjct: 315 NL 316
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 286 GALNLKVLSLNDCLIAEIRFGDDWNQRVETFKNLEILFLNRNRINDWRXXXXXXXXXXXX 345
G NLK L LND +I ++ + VE FK + L + +N++N W+
Sbjct: 184 GLTNLKSLDLNDNIIEKL-------ENVEQFKGISSLMIRKNKLNCWQDVRQLKKLENLT 236
Query: 346 XXXXXXNPIQTTE 358
NP+ +++
Sbjct: 237 VLTMEMNPLYSSD 249
>Z73896-7|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 156 VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI-N 214
+ ++ + LD+SR++ N + Q+ A+L +LR L + N+ + + QL I N
Sbjct: 339 IVAMADTITHLDLSRSV--NLLDCRQI-AELVNLRHLSLKNNK---EGVRDDSLQLIIKN 392
Query: 215 FSKLEKINLSVCDY-TWTDILKLSHL 239
SKLE+++L C+Y T ++ L +L
Sbjct: 393 CSKLEELSLDCCEYLTVNSLITLGNL 418
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 156 VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI-N 214
+ ++ + LD+SR++ N + Q+ A+L +LR L + N+ + + QL I N
Sbjct: 339 IVAMADTITHLDLSRSV--NLLDCRQI-AELVNLRHLSLKNNK---EGVRDDSLQLIIKN 392
Query: 215 FSKLEKINLSVCDY-TWTDILKLSHL 239
SKLE+++L C+Y T ++ L +L
Sbjct: 393 CSKLEELSLDCCEYLTVNSLITLGNL 418
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 156 VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI-N 214
+ ++ + LD+SR++ N + Q+ A+L +LR L + N+ + + QL I N
Sbjct: 237 IVAMADTITHLDLSRSV--NLLDCRQI-AELVNLRHLSLKNNK---EGVRDDSLQLIIKN 290
Query: 215 FSKLEKINLSVCDY-TWTDILKLSHL 239
SKLE+++L C+Y T ++ L +L
Sbjct: 291 CSKLEELSLDCCEYLTVNSLITLGNL 316
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 156 VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSI-N 214
+ ++ + LD+SR++ N + Q+ A+L +LR L + N+ + + QL I N
Sbjct: 339 IVAMADTITHLDLSRSV--NLLDCRQI-AELVNLRHLSLKNNK---EGVRDDSLQLIIKN 392
Query: 215 FSKLEKINLSVCDY-TWTDILKLSHL 239
SKLE+++L C+Y T ++ L +L
Sbjct: 393 CSKLEELSLDCCEYLTVNSLITLGNL 418
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 31.1 bits (67), Expect = 2.0
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 7 VDGNDNNVYIGSRVKCN----DDFGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGI 62
V+ + N IG + N ++ G ++YIG ++G+K L+ G+E+ N + G G +
Sbjct: 451 VESDQLNFRIGDQCIWNNNGAEERGIIKYIGFLKGHKTLYAGVEFKN-TIGAGTGVFNRE 509
Query: 63 QYFKTSKPSAG 73
Q F AG
Sbjct: 510 QLFLAKDGHAG 520
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 374 LQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEELIRKYGIPE 433
LQ+ N +IT + R A + L++ E K + K+ D ++L + + E
Sbjct: 1421 LQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKS--DEYQTTIDDLAHSHRVSE 1478
Query: 434 DSLLVKLPKITTLTSQLLEVTLR 456
DS L L ++ ++ ++T R
Sbjct: 1479 DSRLNALQELEARKYEINDLTSR 1501
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 374 LQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEELIRKYGIPE 433
LQ+ N +IT + R A + L++ E K + K+ D ++L + + E
Sbjct: 1494 LQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKS--DEYQTTIDDLAHSHRVSE 1551
Query: 434 DSLLVKLPKITTLTSQLLEVTLR 456
DS L L ++ ++ ++T R
Sbjct: 1552 DSRLNALQELEARKYEINDLTSR 1574
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 374 LQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEHCRFEELIRKYGIPE 433
LQ+ N +IT + R A + L++ E K + K+ D ++L + + E
Sbjct: 1494 LQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKS--DEYQTTIDDLAHSHRVSE 1551
Query: 434 DSLLVKLPKITTLTSQLLEVTLR 456
DS L L ++ ++ ++T R
Sbjct: 1552 DSRLNALQELEARKYEINDLTSR 1574
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 30.7 bits (66), Expect = 2.7
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 26 FGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQYFK-TSKPSAGSFVRPNKIIPS 84
FG + E++G G + N RG+ G IQY + P+ SF N S
Sbjct: 538 FGIRNQMFEIRGRNGSGVDLVSINIQRGRDMGLFPYIQYRQLVGLPTVTSFNELNTTF-S 596
Query: 85 KTCAEAIRQYYGDPED 100
+ +A+R Y DP D
Sbjct: 597 QENIQALRNVYSDPAD 612
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 147 DQNVSR-AGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPT 205
+ +SR + D SL PN+ L + N ++ + + LP LR LD+S N L+ P
Sbjct: 55 NNRISRLSADELSLYPNLEQLILHNNSITHLSA--DVFSTLPSLRVLDLSSN-SLLSLPN 111
Query: 206 EILAQL 211
E+ ++L
Sbjct: 112 EVFSKL 117
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 147 DQNVSR-AGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPT 205
+ +SR + D SL PN+ L + N ++ + + LP LR LD+S N L+ P
Sbjct: 55 NNRISRLSADELSLYPNLEQLILHNNSITHLSA--DVFSTLPSLRVLDLSSN-SLLSLPN 111
Query: 206 EILAQL 211
E+ ++L
Sbjct: 112 EVFSKL 117
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 161 PNVRSLDVSRNLFSNWREVIQLSAQLPD---LRDLDVSKNRMLI--DAPTEI--LAQLSI 213
P++ SL V +N R + + L D LRD+D S+N + I +A ++ L +L++
Sbjct: 194 PSMTSLSVLHMSNTN-RTLDNIPPTLDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNL 252
Query: 214 NFSKLEKINLSVCDYTWTDILKLSH 238
+ +K+EK+N++ ++ + L +SH
Sbjct: 253 SGNKIEKLNMTEGEWENLETLNMSH 277
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 161 PNVRSLDVSRNLFSNWREVIQLSAQLPD---LRDLDVSKNRMLI--DAPTEI--LAQLSI 213
P++ SL V +N R + + L D LRD+D S+N + I +A ++ L +L++
Sbjct: 194 PSMTSLSVLHMSNTN-RTLDNIPPTLDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNL 252
Query: 214 NFSKLEKINLSVCDYTWTDILKLSH 238
+ +K+EK+N++ ++ + L +SH
Sbjct: 253 SGNKIEKLNMTEGEWENLETLNMSH 277
>AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical
protein Y53F4B.28 protein.
Length = 860
Score = 29.9 bits (64), Expect = 4.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 451 LEVTLRDENGKSFKKKFPSTMAVQKLITLSQRLFSRAGNTGTPRLYVLDEQMDGAEIYLD 510
L+ TL D + SFK FP+ A+QK I + L G+ + YV + +M +D
Sbjct: 140 LQATLNDTSRSSFKLTFPNAEALQKKIFVGYSL----GDLKIEKGYVTEAKMVVLHYMVD 195
Query: 511 NSM 513
S+
Sbjct: 196 TSI 198
>U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical
protein ZC449.6 protein.
Length = 327
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 62 IQYFKTSKPSAGSFVRPNKIIPSKTCAEAIRQYYGDPEDETLA 104
+ + +SK A +FVR I KT R YG P+D T+A
Sbjct: 121 LDIYSSSKAEAEAFVRSQSTIQFKTTCLRFRAIYG-PQDVTVA 162
>U28409-1|AAC46592.3| 231|Caenorhabditis elegans Hypothetical
protein T25D10.2 protein.
Length = 231
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 102 TLAAHRRTIINEWKREMGAPFIEMVGFEKIHQKQKFDRLLEVCVHDQNVSRAGDVSSL 159
T+ H+ I+NE K G I +GF I QK D C +N S+ G+V L
Sbjct: 65 TVEGHKNAILNERKPRGGEERIPEIGFLVIFDVQKEDEGNYYC-QRENDSKWGEVFQL 121
>AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical
protein T27C10.3 protein.
Length = 339
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 91 IRQYYGDPEDETLAAHRRTIINEWKREMGAPFIE--MVGFEK--IHQKQ-KFDRLLEVCV 145
I Y G P ++ A + R +M PF + + FE+ HQK+ + ++L+ C
Sbjct: 243 IHYYQGSPNEKEDAQYARMAYKLLNWDMQRPFTQEQLQDFEEGWTHQKKMREEQLVRTCF 302
Query: 146 HDQN 149
HD N
Sbjct: 303 HDNN 306
>AF016422-1|AAG24175.1| 335|Caenorhabditis elegans Seven tm
receptor protein 238 protein.
Length = 335
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 148 QNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLS 183
+N DV+ + PN LD +RN NWR ++ +S
Sbjct: 168 ENKLNISDVTYIGPNYWKLDENRNEVINWRTMLGMS 203
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,294
Number of Sequences: 27539
Number of extensions: 529014
Number of successful extensions: 1266
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1246
Number of HSP's gapped (non-prelim): 33
length of query: 532
length of database: 12,573,161
effective HSP length: 85
effective length of query: 447
effective length of database: 10,232,346
effective search space: 4573858662
effective search space used: 4573858662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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