Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000149-TA|BGIBMGA000149-PA|IPR000938|CAP-Gly,
IPR001611|Leucine-rich repeat
(532 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferlin... 162 5e-40
At3g10220.1 68416.m01223 tubulin folding cofactor B identical to... 50 5e-06
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 36 0.089
At5g19680.1 68418.m02341 leucine-rich repeat family protein cont... 36 0.089
At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR... 34 0.27
At1g69990.1 68414.m08055 leucine-rich repeat transmembrane prote... 33 0.47
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote... 32 0.83
At5g25910.1 68418.m03077 disease resistance family protein conta... 32 1.1
At3g56370.1 68416.m06269 leucine-rich repeat transmembrane prote... 32 1.1
At1g27190.1 68414.m03312 leucine-rich repeat transmembrane prote... 32 1.1
At2g32660.1 68415.m03992 disease resistance family protein / LRR... 31 1.4
At1g23020.1 68414.m02876 ferric-chelate reductase, putative simi... 31 1.4
At5g51350.1 68418.m06367 leucine-rich repeat transmembrane prote... 31 2.5
At5g01720.1 68418.m00090 F-box family protein (FBL3) contains si... 31 2.5
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 31 2.5
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 31 2.5
At3g28040.1 68416.m03500 leucine-rich repeat transmembrane prote... 31 2.5
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 31 2.5
At1g12970.1 68414.m01506 leucine-rich repeat family protein 31 2.5
At5g63710.1 68418.m07997 leucine-rich repeat transmembrane prote... 30 3.3
At1g69280.1 68414.m07943 expressed protein 30 3.3
At5g65700.1 68418.m08269 leucine-rich repeat transmembrane prote... 30 4.4
At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 30 4.4
At5g44950.1 68418.m05513 F-box family protein contains F-box dom... 30 4.4
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 30 4.4
At5g60610.1 68418.m07606 F-box family protein contains F-box dom... 29 5.8
At3g21000.1 68416.m02655 expressed protein ; expression supporte... 29 5.8
At2g24130.1 68415.m02883 leucine-rich repeat transmembrane prote... 29 5.8
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 29 5.8
At1g21410.1 68414.m02679 F-box family protein similar to SKP1 i... 29 5.8
At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR ... 29 5.8
At5g09790.1 68418.m01133 PHD finger family protein / SET domain-... 29 7.7
At3g56100.1 68416.m06235 leucine-rich repeat transmembrane prote... 29 7.7
At3g47110.1 68416.m05115 leucine-rich repeat transmembrane prote... 29 7.7
At1g35710.1 68414.m04439 leucine-rich repeat transmembrane prote... 29 7.7
At1g12220.1 68414.m01414 disease resistance protein RPS5 (CC-NBS... 29 7.7
>At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferling
(PFI) almost identical to tubulin folding cofactor E
(Pfifferling; PFI) GI:20514267 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor E,
GI:20514266
Length = 531
Score = 162 bits (394), Expect = 5e-40
Identities = 149/548 (27%), Positives = 245/548 (44%), Gaps = 50/548 (9%)
Query: 8 DGNDNNVYIGSRVKCNDD---FGTVRYIGEVQGYKGLWYGIEWDNESRGKHDGCLDGIQY 64
+ ++ + IG RV +D GTV+Y+G+V+GY G W G++WD + GKH+G ++G+ Y
Sbjct: 4 ESSNESFIIGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFY 63
Query: 65 FKTSKPSAGSFVRPNKIIPSKTCAEAIRQYY-----GDPEDETLAAHRRTIINEWKREMG 119
F S+ SFVR + T +A+ Y D EDE +++ R +
Sbjct: 64 FNGRSQSSASFVRSQNLSRGITLLQALELRYRTISTKDEEDEMY------VLSAGNRRVS 117
Query: 120 APFIEMVGFEKIHQK-QKFDRLLEVCVHDQNVSRAG---DVSSLCPNVRSLDVSRNLFSN 175
I+++G +KI K +F+ L + VS G D+ S+ PN++ LD++ NL S+
Sbjct: 118 ---IQLLGGDKIQDKLSRFEELTSASLSYLGVSSLGVSSDLGSILPNLKLLDLTGNLISD 174
Query: 176 WREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILK 235
W E+ L QLP L L++S N + D + L QL + + L+ +WT +
Sbjct: 175 WEEIGALCEQLPALTTLNLSCNSLSSDIKS--LPQL----KNIRVLVLNNSGLSWTQVEI 228
Query: 236 LSHLWPKIHEIIAAYNRIDEIEXXXXXXXXXXXX----XXDGNPITSWSEVMNLGALN-L 290
L P I E+ N I I D N I+ WSEV+ L L L
Sbjct: 229 LRRSLPGIEELHLMGNMISTITSTSSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCL 288
Query: 291 KVLSLNDCLIAEI---RFGDDWNQR-VETFKNLEILFLNRNRINDWRXXXXXXXXXXXXX 346
+ L LN ++ I G + +++ + F +L L L N I D
Sbjct: 289 EQLYLNKNKLSRIFQSVNGTESSEKGSDPFPSLSCLLLGANNIGDLASVDALNGFPQLVD 348
Query: 347 XXXXXNPIQTTEDYDTGSQLVVAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQ 406
NPI ++VA++ +Q LNGS + ++ +E Y++ +++
Sbjct: 349 IRLSENPISDPVRGGVPRFVLVARLTKVQVLNGSEVRAREKKDSEIRYVRMV-----MSK 403
Query: 407 LDFEAKAAFDAEHCRFEELIRKYGIPEDSLLVKLPKITTLTSQLLEVTLR---DENGKS- 462
L+ + + H RF EL + +GI ++ + + S L+ +TL+ G+
Sbjct: 404 LN-DKSGEIELLHPRFYELKKLHGIEDERASAENSGPKNIASGLISITLKCVGPSMGEKP 462
Query: 463 -FKKKFPSTMAVQKLITLSQRLFSRAGNTGTPRLYVLDEQMDGAEIYLDNSMKDLAYYSI 521
KK P ++ V KL LS+ F + PRL+ L E+ LD+ L I
Sbjct: 463 HLTKKLPGSITVGKLKILSENFFKL--KSIKPRLF-LQEEGSPFPTALDDETATLLDVGI 519
Query: 522 KNGDVILV 529
+G +LV
Sbjct: 520 CDGSTLLV 527
>At3g10220.1 68416.m01223 tubulin folding cofactor B identical to
tubulin folding cofactor B GI:20514259 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor B
GI:20514258
Length = 243
Score = 49.6 bits (113), Expect = 5e-06
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 13 NVYIGSR--VKCNDDFGTVRYIGEVQGY-KGLWYGIEWDNESRGKHDGCLDGIQYFKTSK 69
N+ +G R V+ + G V+Y+G + G W GI++D E GKHDG + G ++F+ +
Sbjct: 158 NIKVGDRCQVEPGEKRGMVKYVGRAESLGPGYWVGIQYD-EPLGKHDGMVKGTRFFECPR 216
Query: 70 PSAGSFVRPNKI 81
G VRP+K+
Sbjct: 217 -LQGGMVRPDKV 227
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 35.5 bits (78), Expect = 0.089
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 138 DRLLEVCVHDQNVSRA-GDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSK 196
+RLLE+ + N+ + G + L PN++S+D+S ++ +E+ LS +L L+++
Sbjct: 605 ERLLELHMPHSNLEKLWGGIQPL-PNIKSIDLSFSI--RLKEIPNLS-NATNLETLNLTH 660
Query: 197 NRMLIDAPTEILAQLSINFSKLEKINLSVCD 227
+ L++ P+ I N KL+K+ +S C+
Sbjct: 661 CKTLVELPSSI-----SNLHKLKKLKMSGCE 686
>At5g19680.1 68418.m02341 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 328
Score = 35.5 bits (78), Expect = 0.089
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 17/175 (9%)
Query: 155 DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSIN 214
D L PN+ LD++ N S I AQL L+ L + +N ++ D+ E L+
Sbjct: 31 DTVELPPNLIELDLTANRLSGLDSRI---AQLSTLKKLSLRQN-LIDDSAVEPLSHWDA- 85
Query: 215 FSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAAYNRIDEIEXXXXXXXXXXXXXXDGN 274
S LE++ L D + +S ++ K+ ++N I +E N
Sbjct: 86 LSDLEELVLR--DNKLAKVPDVS-IFTKLLVYDISFNEITSLEGISKASSTLKELYVSKN 142
Query: 275 PITSWSEVMNLGALNLKVLSLNDCLIAEIRFGDDWNQRVETFKNLEILFLNRNRI 329
+ E+ +L L + L N + E +E F LE L+L RNRI
Sbjct: 143 EVNKIMEIEHLHNLQILELGSNRLRVME---------NLENFTKLEELWLGRNRI 188
>At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1183
Score = 33.9 bits (74), Expect = 0.27
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 140 LLEVCVHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRM 199
++E+ + ++ D + L PN+R LDV+ + N RE+ +LS + +L +L +
Sbjct: 605 IIELSLRYSKLNSLWDGTKLLPNLRILDVTGS--RNLRELPELSTAV-NLEELILESCTS 661
Query: 200 LIDAPTEILAQLSINFSKLEKINLSVCD 227
L+ P SIN L K+N+ CD
Sbjct: 662 LVQIPE------SINRLYLRKLNMMYCD 683
>At1g69990.1 68414.m08055 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
GI:8777368 from [Arabidopsis thaliana]
Length = 591
Score = 33.1 bits (72), Expect = 0.47
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 136 KFDRLLEVCVHDQNVS-RAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDV 194
K +R+L + + +S + + LC +++SLD+S N FS Q+ + LP L LD+
Sbjct: 63 KENRILSLQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIP-SQICSWLPYLVTLDL 121
Query: 195 SKNRMLIDAPTEI-----LAQLSINFSKL 218
S N++ P++I L L++N +KL
Sbjct: 122 SGNKLSGSIPSQIVDCKFLNSLALNQNKL 150
>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
kinase, putative
Length = 999
Score = 32.3 bits (70), Expect = 0.83
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 149 NVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEIL 208
N S + D C N+ SLD+S NL L LP+L+ L++S N + P+
Sbjct: 102 NGSLSADDFDTCHNLISLDLSENLLVG-SIPKSLPFNLPNLKFLEISGNNLSDTIPSSF- 159
Query: 209 AQLSINFSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAAYN 251
F KLE +NL+ + T L ++ + E+ AYN
Sbjct: 160 ----GEFRKLESLNLAGNFLSGTIPASLGNV-TTLKELKLAYN 197
>At5g25910.1 68418.m03077 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon
esculentum] gi|3894393|gb|AAC78596;
Length = 811
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 160 CPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLE 219
C ++ LD+S+NLF N ++ P L+ LD++ N D P I SKL+
Sbjct: 110 CTKLQYLDLSQNLF-NGSLPDDINRLAPKLKYLDLAANSFAGDIPKNI-----GRISKLK 163
Query: 220 KINLSVCDYTWTDILKLSHLWPKIHEIIAAYN 251
+NL + +Y T ++ L ++ E+ A N
Sbjct: 164 VLNLYMSEYDGTFPSEIGDL-SELEELQLALN 194
>At3g56370.1 68416.m06269 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
kinase - Malus domestica, EMBL:AF053127
Length = 964
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 163 VRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKIN 222
+RSLD+SRN E + +L +LR LD+S+NR+ P+EI + + + L + +
Sbjct: 193 LRSLDLSRNELEG--EFPEKIDRLNNLRALDLSRNRLSGPIPSEIGSCMLLKTIDLSENS 250
Query: 223 LS 224
LS
Sbjct: 251 LS 252
>At1g27190.1 68414.m03312 leucine-rich repeat transmembrane protein
kinase, putative similar to CLV1 receptor kinase
GB:AAB58929 GI:2160756 from [Arabidopsis thaliana]
Length = 601
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 148 QNVSRAGDVSS---LCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAP 204
Q++ AG++ LC +++SLD+S N S Q+ + LP L LD+S N++ P
Sbjct: 80 QSMQLAGEIPESLKLCRSLQSLDLSGNDLSG-SIPSQICSWLPYLVTLDLSGNKLGGSIP 138
Query: 205 TEILAQLSINFSKLEKINLS 224
T+I+ +N L LS
Sbjct: 139 TQIVECKFLNALILSDNKLS 158
>At2g32660.1 68415.m03992 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4
[Lycopersicon hirsutum] gi|2808683|emb|CAA05268
Length = 589
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 161 PNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRM---LIDAPTEILAQLSINFSK 217
P + SLD+S N F+ + + ++ LD++ N + P I+ + N S
Sbjct: 146 PLLVSLDLSNNSFTGFNGSLDHVLANSSVQVLDIALNSFKGSFPNPPVSIINLSAWNNSF 205
Query: 218 LEKINLSVCDYTWTDILKLSH 238
I LSVC+ T D+L LS+
Sbjct: 206 TGDIPLSVCNRTSLDVLDLSY 226
Score = 29.1 bits (62), Expect = 7.7
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 161 PNVRSLDVSRNLFSNWREVI--QLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKL 218
PN++ L + N F Q S P L+ L++S NR PT A S+ K+
Sbjct: 310 PNLKVLTLRSNSFHGPMSPPDDQSSLAFPKLQILEISHNRFTGSLPTNYFANWSVKSLKM 369
Query: 219 -EKINLSVCDYT-----WTDILKLSH--LWPKIHEIIAAYNRID 254
++ L + DY+ + D L L + L+ + +++ Y+ ID
Sbjct: 370 YDEERLYMGDYSSDRFVYEDTLDLQYKGLYMEQGKVLTFYSAID 413
>At1g23020.1 68414.m02876 ferric-chelate reductase, putative similar
to ferric-chelate reductase (FRO1) [Pisum sativum]
GI:15341529; contains Pfam profile PF01794: Ferric
reductase like transmembrane component
Length = 693
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 191 DLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHL------W-PKI 243
+L+ SKN ML+ +PT IL + SKL+ ++ + + KLS + W K+
Sbjct: 341 ELNFSKNPMLMYSPTSILFVNIPSISKLQWHPFTITSSSKLEPKKLSVMIKSQGKWSSKL 400
Query: 244 HEIIAAYNRIDEI 256
H ++A+ N+ID +
Sbjct: 401 HHMLASSNQIDHL 413
>At5g51350.1 68418.m06367 leucine-rich repeat transmembrane protein
kinase, putative
Length = 895
Score = 30.7 bits (66), Expect = 2.5
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 137 FDRLLEVCVHDQNVSRA--GDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDV 194
F LLE+ + D + S ++ N+RSLD+SRN F S + PD D
Sbjct: 100 FTELLELNISDNSFSGEFPAEIFFNMTNLRSLDISRNNF---------SGRFPDGNGGDS 150
Query: 195 S-KNRMLIDA-PTEILAQLSINFSKLEKINL 223
S KN + +DA L I+ S+LE + +
Sbjct: 151 SLKNLIFLDALSNSFSGPLPIHLSQLENLKV 181
>At5g01720.1 68418.m00090 F-box family protein (FBL3) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 665
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 145 VHDQNVSRAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAP 204
V D +S G +S P +RSLD+SR+ + +++L+ + +L ++D+S + DA
Sbjct: 85 VTDYALSVVGCLSG--PTLRSLDLSRSGSFSAAGLLRLALKCVNLVEIDLSNATEMRDAD 142
Query: 205 TEILAQLSINFSKLEKINLSVC 226
++A+ LE++ L C
Sbjct: 143 AAVVAEA----RSLERLKLGRC 160
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 30.7 bits (66), Expect = 2.5
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 360 YDTGSQLVVAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEH 419
Y T S +V + +++ ELR K Y EW+++QL A+ + E
Sbjct: 56 YATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSY--EWRISQLQNIARMIDEKEK 113
Query: 420 CRFEELIRKYGIPE-DSLLVKLPKITT---LTSQLLEVTLRDENGKSFKKKFPSTMAV 473
C E L + PE ++ L ++ + L + L+ + E K+ FPS+ +
Sbjct: 114 CITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQI 171
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 30.7 bits (66), Expect = 2.5
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 360 YDTGSQLVVAKIGTLQELNGSIITGELRRGAEYDYLKRYGGEWKVAQLDFEAKAAFDAEH 419
Y T S +V + +++ ELR K Y EW+++QL A+ + E
Sbjct: 56 YATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSY--EWRISQLQNIARMIDEKEK 113
Query: 420 CRFEELIRKYGIPE-DSLLVKLPKITT---LTSQLLEVTLRDENGKSFKKKFPSTMAV 473
C E L + PE ++ L ++ + L + L+ + E K+ FPS+ +
Sbjct: 114 CITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQI 171
>At3g28040.1 68416.m03500 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00560 leucine
rich repeat, PF00069 eukaryotic protein kinase domain
Length = 1016
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 160 CPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLE 219
C + SL++SRN FS + +L LR LD+S N + P IL+ ++ +L+
Sbjct: 196 CSVLNSLNLSRNRFSGNPSFVSGIWRLERLRALDLSSNSLSGSIPLGILSLHNLKELQLQ 255
Query: 220 KINLS 224
+ S
Sbjct: 256 RNQFS 260
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 159 LCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAP 204
LCP++ +D+S N FS E+ + +L L DVS N + D P
Sbjct: 269 LCPHLNRVDLSSNHFSG--ELPRTLQKLKSLNHFDVSNNLLSGDFP 312
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 176 WREVIQLSAQ----LPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWT 231
W E+ +S++ +P L LD+S N+ L + P EI +S+ + L +
Sbjct: 555 WSEIKTISSEFFNCMPKLAVLDLSHNQSLFELPEEISNLVSLKYLNLSHTGIRHLSKGIQ 614
Query: 232 DILKLSHL 239
++ K+ HL
Sbjct: 615 ELKKIIHL 622
>At1g12970.1 68414.m01506 leucine-rich repeat family protein
Length = 464
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 171 NLFSNWREVIQLS---AQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINL 223
NL SN+ ++I+L + L +LR+LD+S N++ +L KLEK+NL
Sbjct: 329 NLSSNFSDLIELPDTISDLANLRELDLSNNQI------RVLPDSFFRLEKLEKLNL 378
>At5g63710.1 68418.m07997 leucine-rich repeat transmembrane protein
kinase, putative
Length = 614
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 162 NVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKI 221
N+++L++S N FS + +QL +L+ LD+S N + PT+ + + +FS + I
Sbjct: 141 NLQTLNLSVNSFSG--SIPASWSQLSNLKHLDLSSNNLTGSIPTQFFSIPTFDFSGTQLI 198
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 426 IRKYGIPEDSLLVKLPKITTLTSQLLEVT------LRDENGKSFKKK--FPSTMAVQKLI 477
I YG+ D L + P+ITT S L ++ + + N K K F S++ ++L
Sbjct: 50 IASYGV-SDVRLEEDPEITTRRSTSLSLSPTSSEDIHEINAKGRKSNLSFDSSLHNKELF 108
Query: 478 TLSQRLFSRAGNTGTP 493
+LS +LF G++ TP
Sbjct: 109 SLSSKLFELQGSSDTP 124
>At5g65700.1 68418.m08269 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1003
Score = 29.9 bits (64), Expect = 4.4
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 155 DVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSIN 214
++SSL +R L++S N+F N ++S+ L +LR LDV N + D P + N
Sbjct: 112 EISSLS-GLRHLNLSNNVF-NGSFPDEISSGLVNLRVLDVYNNNLTGDLPVSV-----TN 164
Query: 215 FSKLEKINLSVCDYTWTDILKLSHLWPKIHEIIAAYNRI 253
++L ++L +Y I WP I + + N +
Sbjct: 165 LTQLRHLHLG-GNYFAGKIPPSYGSWPVIEYLAVSGNEL 202
>At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein
kinase, putative and genscan+
Length = 668
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 184 AQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLS 224
+QL +LR L +SKN++ D P E + + F L NL+
Sbjct: 95 SQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLN 135
>At5g44950.1 68418.m05513 F-box family protein contains F-box domain
Pfam:PF00646
Length = 438
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 423 EELIRKYGI---PEDSLLVKLPKITTLTSQLLEV---TLRDENGKSFKKKFPSTMAVQKL 476
+ LI Y I PE LP+ T + +E+ T+R+E+G K F AV K
Sbjct: 343 KNLILDYSISAEPEQIDFTNLPRCLISTLEYVEIKQLTMREESGIKLVKYFLENSAVLKK 402
Query: 477 ITLS 480
+TLS
Sbjct: 403 LTLS 406
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 165 SLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLS 224
S++V R ++ E+ L LR LD+S+N+ L P I LEK+ LS
Sbjct: 809 SIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSI-----SELRSLEKLKLS 863
Query: 225 VC 226
C
Sbjct: 864 GC 865
>At5g60610.1 68418.m07606 F-box family protein contains F-box domain
Pfam:PF00646
Length = 388
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 198 RMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDIL 234
R L ++ E + I F +LE++ LS+C WT ++
Sbjct: 270 RQLYNSIDEYKCRAGIVFKQLEQLELSICSDNWTKLV 306
>At3g21000.1 68416.m02655 expressed protein ; expression supported
by MPSS
Length = 405
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 181 QLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDI 233
+L QL DL+ +D +D EIL +L +KLEK + +C +T +
Sbjct: 121 RLEKQLEDLKMVDKESGSSYLDKALEILERL--GRAKLEKSDYEICKNVFTTL 171
>At2g24130.1 68415.m02883 leucine-rich repeat transmembrane protein
kinase, putative
Length = 980
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 136 KFDRLLEVCVHDQNVS-RAGDVSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDV 194
K D +L V + +S + C + L++SRN FS+ + QLP L++LDV
Sbjct: 465 KMDMVLSVDLSSNELSGKIPPQLGSCIALEHLNLSRNGFSS--TLPSSLGQLPYLKELDV 522
Query: 195 SKNRM 199
S NR+
Sbjct: 523 SFNRL 527
>At1g58190.1 68414.m06605 leucine-rich repeat family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 162 NVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPT--EILAQLSI 213
N++ LD+S N FS + + QL +LR+LD+S+N+ P + L QL +
Sbjct: 1055 NLQGLDMSDNKFSGSNKGL---CQLKNLRELDLSQNKFTGQFPQCFDSLTQLQV 1105
>At1g21410.1 68414.m02679 F-box family protein similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 360
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 156 VSSLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINF 215
+++ C ++ LD+S++L R + L+ PDL L++S D +A L+
Sbjct: 112 IANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDT---AIAYLTRFC 168
Query: 216 SKLEKINLSVCDYTWTD 232
KL+ +NL C TD
Sbjct: 169 RKLKVLNLCGCVKAVTD 185
>At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 885
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 186 LPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDYTWTDILKLSHL 239
+P L LD+S+N L + P EI +S+ + L + + ++ KL HL
Sbjct: 562 MPSLAVLDLSENHSLSELPEEISELVSLQYLDLSGTYIERLPHGLHELRKLVHL 615
>At5g09790.1 68418.m01133 PHD finger family protein / SET
domain-containing protein contains Pfam domain, PF00628:
PHD-finger and PF00856: SET domain
Length = 352
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 456 RDENGKSFKKKFPSTMAVQKLITLSQ-RLFSRAGNTGTPRLYVLDEQMDGAEIYLDNSMK 514
R N +K + + L TL Q + R G P L V+ + ++G + D +K
Sbjct: 182 RSANQSKLEKGGMQVLCKEDLETLEQCQSMYRRGEC--PPLVVVFDPLEGYTVEADGPIK 239
Query: 515 DLAYYSIKNGDVILVKFR 532
DL + + GDV +K R
Sbjct: 240 DLTFIAEYTGDVDYLKNR 257
>At3g56100.1 68416.m06235 leucine-rich repeat transmembrane protein
kinase, putative hypothetical proteins - Arabidopsis
thaliana
Length = 719
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 163 VRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKIN 222
+R +D+S N S + + + L LD+S+N++ + P I S+NF + N
Sbjct: 259 LRKMDISGNSVSG--HIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNN 316
Query: 223 LS 224
LS
Sbjct: 317 LS 318
>At3g47110.1 68416.m05115 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 receptor type
precursor, Oryza sativa, PIR:A57676
Length = 1025
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Query: 186 LPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCDY 228
L LR LD+SKN + P E +A NFSKL+ +NLS+ ++
Sbjct: 567 LTGLRFLDLSKNNLSGTIP-EYMA----NFSKLQNLNLSLNNF 604
>At1g35710.1 68414.m04439 leucine-rich repeat transmembrane protein
kinase, putative similar to many predicted protein
kinases
Length = 1120
Score = 29.1 bits (62), Expect = 7.7
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 158 SLCPNVRSLDVSRNLFSNWREVIQLSAQLPDLRDLDVSKNRMLIDAP----TEILAQLSI 213
S N+ SLD+S N FS+ E+ Q L D+++S+N+ P L QL +
Sbjct: 627 SFLTNLESLDLSSNNFSS--EIPQTFDSFLKLHDMNLSRNKFDGSIPRLSKLTQLTQLDL 684
Query: 214 NFSKLE-KINLSVCDYTWTDILKLSH 238
+ ++L+ +I + D L LSH
Sbjct: 685 SHNQLDGEIPSQLSSLQSLDKLDLSH 710
>At1g12220.1 68414.m01414 disease resistance protein RPS5
(CC-NBS-LRR class) / resistance to Pseudomonas syringae
protein 5 (CC-NBS-LRR class) domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
Identical to RPS5 (resistance to Pseudomonas syringae
protein 5)(gi:3309620)
Length = 889
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 172 LFSNWREVIQLSAQ----LPDLRDLDVSKNRMLIDAPTEILAQLSINFSKLEKINLSVCD 227
LF +V+++SA+ +P L LD+S+N+ L + P EI S+ + L +
Sbjct: 544 LFLQKNDVVKISAEFFRCMPHLVVLDLSENQSLNELPEEISELASLRYFNLSYTCIHQLP 603
Query: 228 YTWTDILKLSHL 239
+ KL HL
Sbjct: 604 VGLWTLKKLIHL 615
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,308,694
Number of Sequences: 28952
Number of extensions: 508031
Number of successful extensions: 1444
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1420
Number of HSP's gapped (non-prelim): 55
length of query: 532
length of database: 12,070,560
effective HSP length: 84
effective length of query: 448
effective length of database: 9,638,592
effective search space: 4318089216
effective search space used: 4318089216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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