Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000148-TA|BGIBMGA000148-PA|IPR007087|Zinc finger,
C2H2-type
(109 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 40 7e-06
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 40 7e-06
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 34 4e-04
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 31 0.002
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 31 0.003
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 30 0.005
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 28 0.024
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 28 0.024
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 0.30
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 0.30
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 2.1
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 2.1
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 20 6.5
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 39.5 bits (88), Expect = 7e-06
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
Y C+DC + +L H++ ++P F+CP C R Q ++ H R
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRTHSGEKP-FRCPVCDRRFSQSSSVTTHMR 70
Score = 31.9 bits (69), Expect = 0.002
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
Y C C + +L +H++ ++P ++C C+ R Q NL H R
Sbjct: 78 YRCRLCKKAFSDSSTLTKHLRIHSGEKP-YECKLCLLRFSQSGNLNRHMR 126
Score = 24.6 bits (51), Expect = 0.23
Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLH 97
+ C C ++ S+ H++ ++P ++C C +A+ + L +H
Sbjct: 50 FRCPVCDRRFSQSSSVTTHMRTHSGERP-YRCRLC-KKAFSDSSTLTKHLRIH 100
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 39.5 bits (88), Expect = 7e-06
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
Y C+DC + +L H++ ++P F+CP C R Q ++ H R
Sbjct: 278 YRCIDCNKSFSQAANLTAHVRTHSGEKP-FRCPVCDRRFSQSSSVTTHMR 326
Score = 31.9 bits (69), Expect = 0.002
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
Y C C + +L +H++ ++P ++C C+ R Q NL H R
Sbjct: 334 YRCRLCKKAFSDSSTLTKHLRIHSGEKP-YECKLCLLRFSQSGNLNRHMR 382
Score = 28.7 bits (61), Expect = 0.014
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 47 CVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
C CG Y +L+ H++ ++P ++C C Q NL H R
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKP-YRCIDCNKSFSQAANLTAHVR 298
Score = 24.6 bits (51), Expect = 0.23
Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLH 97
+ C C ++ S+ H++ ++P ++C C +A+ + L +H
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTHSGERP-YRCRLC-KKAFSDSSTLTKHLRIH 356
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 33.9 bits (74), Expect = 4e-04
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHE 93
Y C C K+ L+ H+ ++P F+C C R ++H+L+ H+
Sbjct: 219 YGCEHCSMKFSDSNQLKAHVLIHTNEKP-FECDKCRGRFRRRHHLVHHK 266
Score = 31.5 bits (68), Expect = 0.002
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLH 97
+ C C + +K LQ H + ++P F+C C R + H+L H R LH
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKP-FECQECHKRFTRDHHLKTHMR-LH 185
Score = 31.1 bits (67), Expect = 0.003
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
+EC +C ++ L+ H++ ++P ++C +C + Q NL H R
Sbjct: 163 FECQECHKRFTRDHHLKTHMRLHTGERP-YRCEHCDRQFVQVANLRRHLR 211
Score = 29.5 bits (63), Expect = 0.008
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLH 92
Y C C ++ +L+RH++ ++P + C +C + + L H
Sbjct: 191 YRCEHCDRQFVQVANLRRHLRVHTGERP-YGCEHCSMKFSDSNQLKAH 237
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 31.5 bits (68), Expect = 0.002
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPS---FKCPYCVYRAYQKHNLLLHERHLHKDMP 101
++C CG + KG+L+ H+ K P +CP C ++ + N L+ ++H+
Sbjct: 163 FKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVC-HKKFT--NALVLQQHIRLHTG 219
Query: 102 EKVDFVSE 109
E D E
Sbjct: 220 EPTDLTPE 227
Score = 29.9 bits (64), Expect = 0.006
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 46 ECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERHLHKDMP 101
+CV C K +LQ H + ++P FKC C K NL H +H+ P
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERP-FKCKICGRAFTTKGNLKTH-MGVHRAKP 189
Score = 21.8 bits (44), Expect = 1.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 44 LYECVDCGNKYKHKGSLQRHIK 65
L++C C K+ + LQ+HI+
Sbjct: 194 LHQCPVCHKKFTNALVLQQHIR 215
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 31.1 bits (67), Expect = 0.003
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHER 94
+EC +C ++ L+ H++ ++P ++C +C + Q NL H R
Sbjct: 10 FECQECHKRFTRDHHLKTHMRLHTGERP-YRCEHCDRQFVQVANLRRHLR 58
Score = 27.5 bits (58), Expect = 0.032
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYC 79
Y C C ++ +L+RH++ ++P + C +C
Sbjct: 38 YRCEHCDRQFVQVANLRRHLRVHTGERP-YGCEHC 71
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 30.3 bits (65), Expect = 0.005
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 50 CGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLH 92
CG ++ LQRH++ ++ F CP C R + +L H
Sbjct: 352 CGKRFTRSDELQRHLRTHTGEK-RFACPICNKRFMRSDHLAKH 393
Score = 23.8 bits (49), Expect = 0.40
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 31 GTAGLSSGKAGWTLYECVDCGNKYKHKGSLQRHIKYECRKQPSFKCP--YCVYRAYQKHN 88
G AG+ K CG Y L+ H+++ ++P F C +C R +
Sbjct: 303 GPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERP-FVCNWLFCGKRFTRSDE 361
Query: 89 LLLHERHLHKDMPEK 103
L +RHL EK
Sbjct: 362 L---QRHLRTHTGEK 373
Score = 19.4 bits (38), Expect = 8.6
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 45 YECVDCGNKYKHKGSLQRHIK 65
+ C C ++ L +H+K
Sbjct: 375 FACPICNKRFMRSDHLAKHVK 395
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 27.9 bits (59), Expect = 0.024
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 45 YECVDCGNKYKHKGSLQRHIKYECRKQPSFKCPYCVYRAYQKHNLLLHERH 95
++C C K H K R+ CP C + KH+L H R+
Sbjct: 202 FKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYHLRN 252
Score = 21.4 bits (43), Expect = 2.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 45 YECVDCGNKYKHKGSLQRHIK 65
Y C DC K+ SL+ H++
Sbjct: 287 YSCRDCSYATKYCHSLKIHLR 307
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 27.9 bits (59), Expect = 0.024
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 74 FKCPYCVYRAYQKHNLLLHERHLHKDMPEKVD 105
F C YC + + +NLL+HER + P D
Sbjct: 80 FICKYCNRQFTKSYNLLIHERTHTDERPYSCD 111
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 45 YECVDCGNKYKHKGSLQRH 63
Y C CG ++ + L+ H
Sbjct: 108 YSCDICGKAFRRQDHLRDH 126
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 0.30
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 74 FKCPYCVYRAYQKHNLLLHE-RHLHKDMPEKVD 105
FKC C Y+A K N L + + +D+ K++
Sbjct: 1085 FKCMICTYKADNKENEQLRKIQESLRDLNRKIE 1117
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 0.30
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 74 FKCPYCVYRAYQKHNLLLHE-RHLHKDMPEKVD 105
FKC C Y+A K N L + + +D+ K++
Sbjct: 1085 FKCMICTYKADNKENEQLRKIQESLRDLNRKIE 1117
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 21.4 bits (43), Expect = 2.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 45 YECVDCGNKYKHKGSLQRHIK 65
Y C DC K+ SL+ H++
Sbjct: 45 YSCRDCSYATKYCHSLKIHLR 65
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.4 bits (43), Expect = 2.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 4 FPGFGTRHGGVAWLGVAQLYTPYML-GYGTAGL 35
FPGFG+ GG + PY + G G GL
Sbjct: 17 FPGFGSTCGGSSSSMAYLKSAPYPVPGLGLHGL 49
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 64 IKYECRKQPSFKCPYC 79
+ + C+ QP F YC
Sbjct: 50 VGHRCQCQPGFTGKYC 65
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.324 0.141 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,115
Number of Sequences: 317
Number of extensions: 1416
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of query: 109
length of database: 114,650
effective HSP length: 49
effective length of query: 60
effective length of database: 99,117
effective search space: 5947020
effective search space used: 5947020
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)
- SilkBase 1999-2023 -