Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000146-TA|BGIBMGA000146-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding, IPR008973|C2
calcium/lipid-binding region, CaLB
         (534 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   1.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    25   2.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   2.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    25   2.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   3.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   8.4  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 256 LTDSGKFIEVERADAIDKQETEAKPLDKIEEAVTDKKS 293
           L +  K I   R + +    T  +P D+ E + T KKS
Sbjct: 247 LIERAKSIRARRTECVTNSVTCDRPSDEAEPSSTSKKS 284


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 63  TGFKKETTSPQWDEHFLF 80
           TG  KET     D+HFLF
Sbjct: 154 TGMSKETQQKLIDDHFLF 171


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/30 (36%), Positives = 12/30 (40%)

Query: 479 KHLSGGTVCAVCDKPVARRLGKQGYECRDC 508
           K   G T C VCD+          Y C DC
Sbjct: 459 KKQQGDTCCWVCDQCEEYEYVHDEYTCMDC 488


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 63  TGFKKETTSPQWDEHFLF 80
           TG  KET     D+HFLF
Sbjct: 170 TGMSKETQQKLIDDHFLF 187


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 378 SVSAERNSHEKALAIPNR 395
           S + ERNSHE    +P R
Sbjct: 178 SNTIERNSHESXFVVPTR 195


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 247 NKKFAYKVELTDSGKFIEVERAD 269
           N   A + ELTD GK  E E+AD
Sbjct: 318 NNVEAVQKELTDLGKLGEEEKAD 340


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 247 NKKFAYKVELTDSGKFIEVERAD 269
           N   A + ELTD GK  E E+AD
Sbjct: 318 NNVEAVQKELTDLGKLGEEEKAD 340


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 247 NKKFAYKVELTDSGKFIEVERAD 269
           N   A + ELTD GK  E E+AD
Sbjct: 318 NNVEAVQKELTDLGKLGEEEKAD 340


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)

Query: 128 QRQQLALQTRPMEQHD 143
           Q+QQLA +T+  +QH+
Sbjct: 114 QQQQLAAETQQQQQHN 129


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,090
Number of Sequences: 429
Number of extensions: 5012
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 9
length of query: 534
length of database: 140,377
effective HSP length: 61
effective length of query: 473
effective length of database: 114,208
effective search space: 54020384
effective search space used: 54020384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)