GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000146-TA|BGIBMGA000146-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding, IPR008973|C2
calcium/lipid-binding region, CaLB
         (534 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         27   1.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    26   2.2  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   3.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   5.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   8.9  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 118 GIDELLAAPSQRQQLALQTRPMEQHDVSGTL 148
           G+  L+ APSQ+QQ      P+  H + G +
Sbjct: 169 GLTGLMQAPSQQQQHLQPVHPLAFHPIGGPI 199


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 26.2 bits (55), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 233 FSIRNPEWSVAILTNKKFAYKVELTDSGKFI 263
           FS    EW  + LTN+++  KV+   S +F+
Sbjct: 93  FSASLVEWLESYLTNRRYRVKVDCMTSREFV 123


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 42  KTGCIAPYCVVEMDEPPQKNQTGFKKETTSPQWDEHFLFDLSPQTAELLFEVYDRTXXXX 101
           +TG   P+  + ++   Q+  T   K +  P+W+ H+   L  +   +L  +Y+      
Sbjct: 20  QTGLPDPFAKILVEGTTQEYTTEICKASLDPRWNSHYDLFLG-KNDSILITIYNH----- 73

Query: 102 XXXXXXQHRFLGLGLVGIDEL-LAAPSQRQQLALQTRPMEQHD-VSGTLTVEFLFID 156
                 +  FLG   +    + L   +  Q+L L  R  +  D V G + V  L  D
Sbjct: 74  -RKMPKRQAFLGCVRIAASSIQLLRDTGYQRLDLVKRSQDDPDPVKGQIIVSLLSRD 129


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 504 ECRDCRLRCHKHCHVRAAAACP 525
           ECR    R  KHC ++ ++A P
Sbjct: 823 ECRRMLQRVQKHCAIKVSSAFP 844


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 8.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 430  IHEASTLVLETIEAGIKKHYLV 451
            +H+ + LV  TIE  +K+ YL+
Sbjct: 2275 LHQTNKLVTTTIEYAVKQFYLL 2296


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,621
Number of Sequences: 2123
Number of extensions: 19505
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 5
length of query: 534
length of database: 516,269
effective HSP length: 67
effective length of query: 467
effective length of database: 374,028
effective search space: 174671076
effective search space used: 174671076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)