Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000145-TA|BGIBMGA000145-PA|undefined
(209 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 32 0.053
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.38
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 0.87
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 27 2.0
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 3.5
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 3.5
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 26 4.6
SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 26 4.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 6.1
SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 8.1
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 25 8.1
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 32.3 bits (70), Expect = 0.053
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 108 SAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQ 167
S+ S S K T A G +TP + + S + KKH+ C + P +
Sbjct: 318 SSNSSSLSLKSTLAEGMKGSTPLAAVKTEKASKAARVMKQKKHREHVCFNCGVTETPLWR 377
Query: 168 WVNDVLTWLYNDLVIVNEL--VQQWISSMNEFSKKSVEEVL 206
+D L +L N + N+ V + +S N+ S K++E ++
Sbjct: 378 RTSDKLNFLCNACGLYNKQYGVMRPLSPRNKGSSKALENLV 418
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.38
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 76 AKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPA 127
AK + D ++ + +VSSA S L+ SA SAS + ++ PA
Sbjct: 245 AKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSSASSDASPA 296
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 0.87
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 79 TTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRM 138
+TD I N T+EI S+ S+ + + + S K++ FV T G +
Sbjct: 600 STDYSSSLITVCSNVTSEI--SSTSLASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSV 657
Query: 139 SPGPEQLTVKKHQSVSVPTCTGGDQPSVQWVNDVLT 174
T QS SVP D P+ W+ + +T
Sbjct: 658 G----FTTTLATQSGSVPGTVLVDVPTPSWITETVT 689
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 81 DADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133
D+ + K+D +KNT + VL T K S + +P+ +KK
Sbjct: 17 DSAENKVDSSKNTEANFPITLPKVLPTDPKASSLHKPQEQQPNIIPSKEEDKK 69
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 174 TWLYNDLVIVNELVQQWISSMNEFSKKSVEEVLEV 208
T +Y+ + ++ + +W+SSM S ++ EE+ V
Sbjct: 500 TLVYSLFISISPFLFRWLSSMQGLSSRAEEEIYAV 534
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 26.2 bits (55), Expect = 3.5
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Query: 77 KKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLG 136
K+T DK + E K + S+ S + K + KP K++ P P NK
Sbjct: 413 KETNKIDKLYVSENKAESAVASESSLSEGTLALKAPAPENKPEKSSTSKPPVPENKAEDS 472
Query: 137 RMSPGPEQLTVKKHQSVSVPTCTGG-DQPSVQWVNDVLTWLYNDLVIVNELVQQWISSMN 195
+ ++ S P+ T G + ++ + V D V++ V + S +
Sbjct: 473 VVLKSSVPEDKSENSIASKPSATEGIPENAIALQSSVPENKAEDSVVLKSSVPEDKSEDS 532
Query: 196 EFSKKSVEE 204
SK SV E
Sbjct: 533 VPSKSSVLE 541
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 93 TTNEIVSS-ADSVLATSAKVKSASFKPTKATGFVPATPPNKKRL 135
++N + SS + S ++ S+ V+S + KPTKA+G V + K+ L
Sbjct: 219 SSNSVKSSPSKSFVSISSPVQS-TVKPTKASGVVKSEKVEKRSL 261
>SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 103 SVLATSAKVKSASFKPTKATGFVPATPPNKKR 134
+VL + + S SF P K T + PP KR
Sbjct: 425 AVLQKTDPINSRSFDPKKYTASMEILPPENKR 456
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 6.1
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 165 SVQWVNDVLTWLYNDLVIVNELVQQWISS------MNEFSKKSVEEVLE 207
+V+++ D+L W++ +V ELV+ ++ +N F V VLE
Sbjct: 295 TVRFIGDLLAWIHQTIVNEKELVEALFAARKRQIQLNPFPPWDVPNVLE 343
>SPCC757.04 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 684
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 98 VSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQL 145
+SSADS + +V S+ K GF+ P KR PG QL
Sbjct: 337 ISSADSDIRR--RVFWGSYVADKFIGFIMGRPTMLKRSDASIPGSNQL 382
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 25.0 bits (52), Expect = 8.1
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 76 AKKTTDADKPKIDETKNTTNE-IVSSADSVLATS--AKVKSASFKPTKATGFVPATPPNK 132
A+K+ ++ + +E +T N+ VSS+ V+A + A SAS KP+ ++ + +K
Sbjct: 327 AEKSFTIEQNRENEKSSTKNDSTVSSSAVVMAPAGPAMAPSASNKPSASSTTKSSNSKSK 386
Query: 133 KRLGRMS 139
K++ +S
Sbjct: 387 KKVTSIS 393
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.128 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 881,138
Number of Sequences: 5004
Number of extensions: 34276
Number of successful extensions: 146
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 12
length of query: 209
length of database: 2,362,478
effective HSP length: 70
effective length of query: 139
effective length of database: 2,012,198
effective search space: 279695522
effective search space used: 279695522
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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