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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000145-TA|BGIBMGA000145-PA|undefined
         (209 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0397 - 8549273-8549380,8549718-8549765,8549875-8549964,855...    29   3.6  
07_03_1796 + 29609818-29610274,29610427-29610908,29611547-296117...    29   3.6  
02_02_0034 - 6246183-6246553,6246672-6249699                           29   3.6  
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    28   4.8  
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255           28   6.3  
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155...    28   6.3  
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033     27   8.4  

>09_02_0397 -
           8549273-8549380,8549718-8549765,8549875-8549964,
           8550479-8550562,8551119-8551280,8551729-8551781,
           8552763-8552807,8553840-8553876,8554212-8554320,
           8554391-8554818,8554939-8555085
          Length = 436

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 77  KKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKAT 122
           K+ T +  P + + K  TN  VSS   V+ TS +  +A  K  + T
Sbjct: 127 KENTVSTNPCVSDEKAATNSNVSSGHGVILTSVEADAAEDKGCRHT 172


>07_03_1796 +
           29609818-29610274,29610427-29610908,29611547-29611755,
           29612111-29612177,29612252-29612302
          Length = 421

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 77  KKTTDADKPKIDETKNTTNEIVSSADSVL-ATSAKVKSASFKPTKATGFVPATPPNKKRL 135
           K+  +AD+P+ D T++  + +  +++S L  +S  ++S        TGF+    P  +  
Sbjct: 225 KQNAEADRPQQDSTRHQQDSVQGASNSQLKESSVTMESIRGTGPDITGFMEEATP--RVA 282

Query: 136 GRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQ-QWISSM 194
           G+ +P      +K HQ            P+          L N +V+ + + + QW  S 
Sbjct: 283 GQFAPD----NIKNHQVTGSKRSLMERNPTASTYEG--EHLCNIMVVSHRIFEVQWDGSD 336

Query: 195 NEFSKKSVEEVLEV 208
           +E  + + +  L +
Sbjct: 337 SEGKRPAAKRRLPI 350


>02_02_0034 - 6246183-6246553,6246672-6249699
          Length = 1132

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 18/60 (30%), Positives = 26/60 (43%)

Query: 95  NEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVS 154
           N +  S   V A +A ++  S    K TG +P T  N   L R+S     L     +S+S
Sbjct: 280 NNLAGSIPPVTAIAAPIQFLSLTQNKLTGGIPPTLGNLSSLVRLSLAANNLVGSIPESLS 339


>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
            5710542-5710661,5711321-5711421,5711618-5711743,
            5713504-5713596,5713694-5713816,5713889-5714032,
            5714539-5714672,5714893-5715002,5715315-5715430,
            5716438-5716572,5716650-5716820,5717545-5717709,
            5718165-5718242,5718313-5718445,5718551-5718741,
            5718842-5718914,5719001-5719056,5719142-5719300,
            5719383-5719496,5719562-5719654,5720544-5720726,
            5720801-5720878,5720966-5721052,5721135-5721216,
            5721288-5721400,5721486-5721636,5721759-5721877,
            5721966-5722163,5722377-5722442,5723837-5723957,
            5724224-5724343,5724412-5724542,5725210-5725341,
            5725418-5725519,5726231-5726437,5726510-5726626,
            5727468-5727623,5727721-5727810,5728624-5728848,
            5728969-5729091,5729202-5729284,5729459-5729618,
            5730264-5730374,5730652-5730751,5731375-5731454,
            5731752-5731847,5731961-5732110
          Length = 1991

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 157  TCTGGDQPSVQWVNDVLTWLYNDLVIVNE---LVQQWISSMNEFSKKSVEEVLEV 208
            T  G  QP++Q ++D+L  +   +  V E   ++   I  +NE S+K V++++++
Sbjct: 1829 TTEGQQQPTLQLISDLLNSITVAMERVAEEKYMLLNKIRDLNELSRKEVDDIIKL 1883


>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
          Length = 863

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/62 (19%), Positives = 29/62 (46%)

Query: 148 KKHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQQWISSMNEFSKKSVEEVLE 207
           K ++ + + +    D+ S+Q+++  L + Y+D+     L   W  S+    + S+    +
Sbjct: 657 KSYEKIFISSLNALDRHSLQYLDLSLYYSYSDIAAKRFLFDSWFPSLKNLRRLSIVNGFK 716

Query: 208 VT 209
            T
Sbjct: 717 TT 718


>05_04_0226 +
           19215091-19215172,19215281-19215394,19215508-19215590,
           19215682-19215820,19215862-19216191,19216414-19216693,
           19216795-19216956,19217134-19217349,19217458-19217495,
           19217597-19217760,19217833-19217946,19218042-19218083,
           19218180-19218983
          Length = 855

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 126 PATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQP 164
           PA  P++   G    G E++ V+++     P C GG  P
Sbjct: 18  PAASPSRHPPGEEGGGAERVEVEEYVDPPSPDCCGGADP 56


>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
          Length = 1614

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 85  PKIDETKNT-TNEIVSSADSVLATSAKVKSASFKPTKATGFVPATP--PNKKRLGRMSPG 141
           P+I    N  +    SS  S ++  +  K+ + KP  A     ++P      +L  M PG
Sbjct: 418 PEISSAGNRRSGSSESSLKSPVSQLSSSKALTSKPVAADAAAKSSPVISGSSKLQHMQPG 477

Query: 142 PEQLTVKKHQSVSVPTCTGGDQPSVQ 167
                +K+  S S     G + P+V+
Sbjct: 478 NAVTNLKEQPSKSTGGTCGSELPAVK 503


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.128    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,623,426
Number of Sequences: 37544
Number of extensions: 218957
Number of successful extensions: 699
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 693
Number of HSP's gapped (non-prelim): 8
length of query: 209
length of database: 14,793,348
effective HSP length: 79
effective length of query: 130
effective length of database: 11,827,372
effective search space: 1537558360
effective search space used: 1537558360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)

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