BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000145-TA|BGIBMGA000145-PA|undefined (209 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0397 - 8549273-8549380,8549718-8549765,8549875-8549964,855... 29 3.6 07_03_1796 + 29609818-29610274,29610427-29610908,29611547-296117... 29 3.6 02_02_0034 - 6246183-6246553,6246672-6249699 29 3.6 02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 28 4.8 06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 28 6.3 05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 28 6.3 02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 27 8.4 >09_02_0397 - 8549273-8549380,8549718-8549765,8549875-8549964, 8550479-8550562,8551119-8551280,8551729-8551781, 8552763-8552807,8553840-8553876,8554212-8554320, 8554391-8554818,8554939-8555085 Length = 436 Score = 28.7 bits (61), Expect = 3.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 77 KKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKAT 122 K+ T + P + + K TN VSS V+ TS + +A K + T Sbjct: 127 KENTVSTNPCVSDEKAATNSNVSSGHGVILTSVEADAAEDKGCRHT 172 >07_03_1796 + 29609818-29610274,29610427-29610908,29611547-29611755, 29612111-29612177,29612252-29612302 Length = 421 Score = 28.7 bits (61), Expect = 3.6 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 10/134 (7%) Query: 77 KKTTDADKPKIDETKNTTNEIVSSADSVL-ATSAKVKSASFKPTKATGFVPATPPNKKRL 135 K+ +AD+P+ D T++ + + +++S L +S ++S TGF+ P + Sbjct: 225 KQNAEADRPQQDSTRHQQDSVQGASNSQLKESSVTMESIRGTGPDITGFMEEATP--RVA 282 Query: 136 GRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQ-QWISSM 194 G+ +P +K HQ P+ L N +V+ + + + QW S Sbjct: 283 GQFAPD----NIKNHQVTGSKRSLMERNPTASTYEG--EHLCNIMVVSHRIFEVQWDGSD 336 Query: 195 NEFSKKSVEEVLEV 208 +E + + + L + Sbjct: 337 SEGKRPAAKRRLPI 350 >02_02_0034 - 6246183-6246553,6246672-6249699 Length = 1132 Score = 28.7 bits (61), Expect = 3.6 Identities = 18/60 (30%), Positives = 26/60 (43%) Query: 95 NEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVS 154 N + S V A +A ++ S K TG +P T N L R+S L +S+S Sbjct: 280 NNLAGSIPPVTAIAAPIQFLSLTQNKLTGGIPPTLGNLSSLVRLSLAANNLVGSIPESLS 339 >02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449, 5710542-5710661,5711321-5711421,5711618-5711743, 5713504-5713596,5713694-5713816,5713889-5714032, 5714539-5714672,5714893-5715002,5715315-5715430, 5716438-5716572,5716650-5716820,5717545-5717709, 5718165-5718242,5718313-5718445,5718551-5718741, 5718842-5718914,5719001-5719056,5719142-5719300, 5719383-5719496,5719562-5719654,5720544-5720726, 5720801-5720878,5720966-5721052,5721135-5721216, 5721288-5721400,5721486-5721636,5721759-5721877, 5721966-5722163,5722377-5722442,5723837-5723957, 5724224-5724343,5724412-5724542,5725210-5725341, 5725418-5725519,5726231-5726437,5726510-5726626, 5727468-5727623,5727721-5727810,5728624-5728848, 5728969-5729091,5729202-5729284,5729459-5729618, 5730264-5730374,5730652-5730751,5731375-5731454, 5731752-5731847,5731961-5732110 Length = 1991 Score = 28.3 bits (60), Expect = 4.8 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%) Query: 157 TCTGGDQPSVQWVNDVLTWLYNDLVIVNE---LVQQWISSMNEFSKKSVEEVLEV 208 T G QP++Q ++D+L + + V E ++ I +NE S+K V++++++ Sbjct: 1829 TTEGQQQPTLQLISDLLNSITVAMERVAEEKYMLLNKIRDLNELSRKEVDDIIKL 1883 >06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 Length = 863 Score = 27.9 bits (59), Expect = 6.3 Identities = 12/62 (19%), Positives = 29/62 (46%) Query: 148 KKHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQQWISSMNEFSKKSVEEVLE 207 K ++ + + + D+ S+Q+++ L + Y+D+ L W S+ + S+ + Sbjct: 657 KSYEKIFISSLNALDRHSLQYLDLSLYYSYSDIAAKRFLFDSWFPSLKNLRRLSIVNGFK 716 Query: 208 VT 209 T Sbjct: 717 TT 718 >05_04_0226 + 19215091-19215172,19215281-19215394,19215508-19215590, 19215682-19215820,19215862-19216191,19216414-19216693, 19216795-19216956,19217134-19217349,19217458-19217495, 19217597-19217760,19217833-19217946,19218042-19218083, 19218180-19218983 Length = 855 Score = 27.9 bits (59), Expect = 6.3 Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 126 PATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQP 164 PA P++ G G E++ V+++ P C GG P Sbjct: 18 PAASPSRHPPGEEGGGAERVEVEEYVDPPSPDCCGGADP 56 >02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 Length = 1614 Score = 27.5 bits (58), Expect = 8.4 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Query: 85 PKIDETKNT-TNEIVSSADSVLATSAKVKSASFKPTKATGFVPATP--PNKKRLGRMSPG 141 P+I N + SS S ++ + K+ + KP A ++P +L M PG Sbjct: 418 PEISSAGNRRSGSSESSLKSPVSQLSSSKALTSKPVAADAAAKSSPVISGSSKLQHMQPG 477 Query: 142 PEQLTVKKHQSVSVPTCTGGDQPSVQ 167 +K+ S S G + P+V+ Sbjct: 478 NAVTNLKEQPSKSTGGTCGSELPAVK 503 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.316 0.128 0.384 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,623,426 Number of Sequences: 37544 Number of extensions: 218957 Number of successful extensions: 699 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 693 Number of HSP's gapped (non-prelim): 8 length of query: 209 length of database: 14,793,348 effective HSP length: 79 effective length of query: 130 effective length of database: 11,827,372 effective search space: 1537558360 effective search space used: 1537558360 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 58 (27.5 bits)
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