BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000145-TA|BGIBMGA000145-PA|undefined (209 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17 SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57) 33 0.23 SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 0.69 SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2 SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) 30 1.6 SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) 29 2.1 SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 29 2.8 SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 29 2.8 SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_20824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_37766| Best HMM Match : IncA (HMM E-Value=0.4) 29 3.7 SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 29 3.7 SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) 29 3.7 SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9 SB_15755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9 SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 28 4.9 SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) 28 6.5 SB_37957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 28 6.5 SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_50866| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5 SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) 28 6.5 SB_24414| Best HMM Match : DUF1059 (HMM E-Value=2.8) 27 8.6 SB_7955| Best HMM Match : SH3_1 (HMM E-Value=0.77) 27 8.6 >SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1352 Score = 33.1 bits (72), Expect = 0.17 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Query: 92 NTTNEIVSSADSVLATSAKVKSASFKPTKA-TGFVPATPPNKKRLGRMSPGPEQLTVKKH 150 N + E+VSS + +K+ A KPT P +KRL R+SP ++ VKK Sbjct: 501 NQSFEVVSSVSFI--DVSKLPDARVKPTPTFEAKAPIEEVFEKRLRRLSPWVVEMNVKKG 558 Query: 151 QSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQQWISSMNE 196 Q + P + + V W + + +E +Q + S+ E Sbjct: 559 QIEIRNPLKKDEVPKMFTYDAVYDWNSKQIDLYDETFRQLVESVLE 604 >SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57) Length = 818 Score = 32.7 bits (71), Expect = 0.23 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 75 FAKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133 F KT++ DK K + N ++ A + L +SAK+++ ++ + +P+TP N K Sbjct: 592 FPVKTSNIDKKK--QKSNRRAQLAKGAAASLLSSAKLRNQKYERKRNFSSLPSTPKNAK 648 >SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) Length = 340 Score = 31.1 bits (67), Expect = 0.69 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 5/135 (3%) Query: 57 WMVLSIAIIAIAKWAYGRFAKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASF 116 ++ L + + A A + + T +P +T S+ + + K S Sbjct: 125 FLTLRLMLFAATSGATAKGSGTPTSTKQPSSSRPFKSTKPTKSTKPTKSTKATK----ST 180 Query: 117 KPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQWVNDVLT-W 175 KPTK+T T P K S P + T + PT +P+ + + L Sbjct: 181 KPTKSTKPTKPTKPTKSTKPTKSTKPTKSTKPTESKPTAPTSLPDQRPNCRLPSMPLNPD 240 Query: 176 LYNDLVIVNELVQQW 190 ++ D+V+ +V W Sbjct: 241 VFMDMVLSGHVVNTW 255 >SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1393 Score = 30.3 bits (65), Expect = 1.2 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 8/154 (5%) Query: 53 LVFIWMVLSIAIIAIAKWAYGRFAKKTTDADKP---KIDETKNTTNEIVSSADSVLATSA 109 +V +W + + I K G F T AD P KI + + + S++ +V + Sbjct: 584 IVVLWSTPEMHNVRIVKGPMG-FG--FTIADSPYGQKIKQILDAQRLLPSNSQNVEDSWR 640 Query: 110 KVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQWV 169 K + S P A +P PP +R+G S G + + ++ + + GG+Q Sbjct: 641 KPRPKSTPPMGAVQVLPMGPPPSQRMG--SAGNLATSGEATRNQEIGSGRGGNQAYFDKG 698 Query: 170 NDVLTWLYNDLVIVNELVQQWISSMNEFSKKSVE 203 D LT Y + + ++ S+N SV+ Sbjct: 699 GDALTQSYPPIRKAVQSAKRSQDSLNRGHDDSVD 732 >SB_23520| Best HMM Match : TIL (HMM E-Value=0.0062) Length = 238 Score = 29.9 bits (64), Expect = 1.6 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Query: 65 IAIAKWAY-----GRFAKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPT 119 +AIAKW + R + T + T +T S A + TS K ++ + KP Sbjct: 126 MAIAKWQFYDRKMPRLPRGTFAKTRATTATTTTSTTTKTSKATTTTKTSVKAEATTTKPE 185 Query: 120 KATGFVPATPPNKK 133 T T NKK Sbjct: 186 ATTPTTTTTTNNKK 199 >SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1308 Score = 29.5 bits (63), Expect = 2.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Query: 115 SFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTG 160 SF P+ GF P++ P+ G++ PG S VP+ TG Sbjct: 969 SFPPSSMGGFPPSSQPSMYNPGQVQPGYPGAMTPGAPSPGVPSPTG 1014 >SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) Length = 632 Score = 29.5 bits (63), Expect = 2.1 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 84 KPKIDETKNTTNEIVSSA--DSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPG 141 KP+ +T T++E A D++ T KS KP TG +P +K + P Sbjct: 414 KPRSPKTITTSSEEKEDAEFDALPVTPRVPKSGVKKPVSKTGKIPDKEEKEKFKKPLPPK 473 Query: 142 PEQLTVKKHQ 151 P ++ KK Q Sbjct: 474 PWKMKKKKVQ 483 >SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1887 Score = 29.1 bits (62), Expect = 2.8 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Query: 76 AKKTTDADKPKIDET-KNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKR 134 A TT DK + + T K TT ++ + A+ K + K T AT VPAT P R Sbjct: 1411 APPTTVEDKTREEATTKPTTTTRKTTIPTTTASETKPPTIR-KTTTATTTVPATKPPTTR 1469 Query: 135 LGRMSPGPEQLTVKKHQSVSVPTCT 159 + + T +K + + P T Sbjct: 1470 KTTTATTTQGRTTRKPTTTAEPPTT 1494 >SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18) Length = 485 Score = 29.1 bits (62), Expect = 2.8 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Query: 75 FAKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGF-VPATPPNKK 133 F + T +P +E + ++V +T V+ A KP K T T P +K Sbjct: 209 FTETTAVESQPTFEEDRPKPGKLVGKWQPEEST---VEKAIIKPGKLTNIEFKETEPEEK 265 Query: 134 RLGRMSPGPEQLTVKK 149 ++ + P P +L ++K Sbjct: 266 QVVKQQPPPRKLQIEK 281 >SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) Length = 577 Score = 29.1 bits (62), Expect = 2.8 Identities = 13/30 (43%), Positives = 15/30 (50%) Query: 73 GRFAKKTTDADKPKIDETKNTTNEIVSSAD 102 G F +TD K K TK TT E +S D Sbjct: 434 GEFYDYSTDTSKTKTTSTKTTTTEYISHTD 463 >SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1128 Score = 28.7 bits (61), Expect = 3.7 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 79 TTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRM 138 TT A P T ++ DS T+A+ + PT+A P PP +K++ Sbjct: 109 TTSAPPPPTTTAPPATTSPPTTTDSPPTTAAETLPPTDAPTEA----PTEPPTEKKISNA 164 Query: 139 SPGPEQLTVKKHQSVSVPTCTGGDQPSV 166 L + P GG+ +V Sbjct: 165 VTETRDLLGTPADEGTTPASPGGNAANV 192 >SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1535 Score = 28.7 bits (61), Expect = 3.7 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%) Query: 82 ADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPG 141 A+K + + + E+ S D A KP F P P K L + P Sbjct: 1248 AEKTPVSMSSSPVGELTSHTDQSQAQRPNPTPTDIKPNVHQEF-PIPPELKPPLPQRFPT 1306 Query: 142 PEQLTVKKHQSVSVP 156 P + HQ ++P Sbjct: 1307 PTDIKPNVHQEFTIP 1321 >SB_20824| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 479 Score = 28.7 bits (61), Expect = 3.7 Identities = 16/53 (30%), Positives = 26/53 (49%) Query: 103 SVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSV 155 S + T ++ +A++ P AT AT +LG + GP TV +H V + Sbjct: 261 STVTTGPQLGNATYGPGHATVTQYATVTTGPQLGNATYGPGHATVTQHSPVDL 313 >SB_37766| Best HMM Match : IncA (HMM E-Value=0.4) Length = 585 Score = 28.7 bits (61), Expect = 3.7 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 138 MSPGPEQLTVKKHQSVSVPTCTGGDQPS--VQWVNDVLTWLYNDL 180 MS GP +L+ Q+ + P TGGD S +Q + D L N++ Sbjct: 371 MSLGPPRLSAHPPQTPTAPASTGGDAQSFRLQVIRDTQAVLDNEI 415 >SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) Length = 1086 Score = 28.7 bits (61), Expect = 3.7 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 78 KTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGR 137 K A KP D N+ S S + SAS P +G + TP +KR R Sbjct: 574 KLKAASKPVSDRGLAGQNDGSSVRRSKRVAAKAQGSASNGPASPSGTL--TP--EKRKAR 629 Query: 138 MSPGPEQLTVKKHQSVSVPTCT 159 +P P++ V++H + SV + T Sbjct: 630 SNPLPDENLVEQHHTASVLSAT 651 >SB_891| Best HMM Match : DUF1098 (HMM E-Value=0.47) Length = 715 Score = 28.7 bits (61), Expect = 3.7 Identities = 13/42 (30%), Positives = 22/42 (52%) Query: 76 AKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFK 117 A KT +AD + +ET T N V+ ++++ S + S K Sbjct: 570 ASKTVEADSSRANETMTTLNNKVAPLNAIIQVSQGPNNTSLK 611 >SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1212 Score = 28.3 bits (60), Expect = 4.9 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 76 AKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRL 135 A+KT ++D+P D T + V A+S+ +++ A P + PA PP + Sbjct: 951 AQKTEESDQPSKDSESKTVPDTV-KAESMPVPASRQSKAPI-PHPSPPMQPAKPPRQHTQ 1008 Query: 136 GRMSPGP 142 + P P Sbjct: 1009 CSIDPVP 1015 >SB_15755| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 106 Score = 28.3 bits (60), Expect = 4.9 Identities = 9/37 (24%), Positives = 23/37 (62%) Query: 149 KHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNE 185 + Q +++P C G + P+ +W +++ D+V+V++ Sbjct: 16 RSQEMTIPRCFGINVPTKKWRSEIRNVQVGDIVVVSD 52 >SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) Length = 851 Score = 28.3 bits (60), Expect = 4.9 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Query: 118 PTKATGFVPATPPNKKRLGRMSPG--PEQLTVKKHQSVSVPTCTGGDQPSV 166 PT A G ++PP+ + + P P +L V+ H+++S+P G +PSV Sbjct: 274 PTSA-GAPLSSPPSAAAVAKKLPEHKPMELRVQIHRTMSLPPDAGRGRPSV 323 >SB_50198| Best HMM Match : Frizzled (HMM E-Value=0) Length = 654 Score = 27.9 bits (59), Expect = 6.5 Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 3/107 (2%) Query: 51 VMLVFIWMVLSIAIIA-IAKWAYGRFAKKTTDADKPKIDETKNTTNEIVSSADSVLATSA 109 V +V +M+L I I + + W+ F K K E K + SA + Sbjct: 543 VFIVKYFMLLIIGITSNMWIWSTKTFKSWRKFYSKRKGGEAKKKVDYSAGSAPPKNSLQV 602 Query: 110 KVKSASFKPT--KATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVS 154 + S +P + F P P R SP P LT K+ ++ Sbjct: 603 HMPPPSVQPVYHHTSAFAPIAPSPATRSVGSSPAPNSLTYSKNSGLN 649 >SB_37957| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 280 Score = 27.9 bits (59), Expect = 6.5 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Query: 75 FAKKTTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKR 134 F K+TT +K + +TK + SA SVL ++A + S T A+ V T P+ Sbjct: 105 FTKETTLVNKRAMQDTKE-VESVTKSATSVLKSTASITKVS--DTMAS--VTKTSPSSSS 159 Query: 135 LGRMS 139 L +S Sbjct: 160 LSTVS 164 >SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) Length = 1204 Score = 27.9 bits (59), Expect = 6.5 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 76 AKKTTDADKPKIDETKNTTNEIVSSADSVLATS--AKVKSASFKP-TKATGFVPATPPNK 132 AK+ + +I K T+N +V + ++S A V S P T A+ + T P+K Sbjct: 1026 AKEGGKPEGARIKIPKKTSNSVVKPEGAAKSSSPQAAVGPFSLAPSTTASNMISKTLPSK 1085 Query: 133 KRLGRMSPGPEQLTVKKHQSVSVPTCT 159 + ++S P V S+P T Sbjct: 1086 PKKTKLSINPISQRVCARDGCSMPART 1112 >SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1867 Score = 27.9 bits (59), Expect = 6.5 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Query: 126 PATPPNKKRLGRMSPGPEQ--LTVKKHQSVSVPT 157 P++PP ++++ +SP PE+ + +K SV+ PT Sbjct: 1479 PSSPPRQRKVSVLSPNPERPIPSQRKMTSVTFPT 1512 >SB_50866| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 843 Score = 27.9 bits (59), Expect = 6.5 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 112 KSASFKPTKAT----GFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQ 167 +S+ P AT +V PN + G + GP +L +K+ S+ V D SV Sbjct: 114 RSSCLTPRPATRTIRDWVAQAYPNTRPAGCDTEGPRELKPEKYYSLFVGGADINDDGSVW 173 Query: 168 WVN 170 WV+ Sbjct: 174 WVS 176 >SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1051 Score = 27.9 bits (59), Expect = 6.5 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%) Query: 93 TTNEIVSSADSVLATSAKVKSAS-FKPT 119 T N+IV A S ATSA K S FKPT Sbjct: 996 TNNQIVKQAKSTQATSAAGKKKSPFKPT 1023 >SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) Length = 810 Score = 27.9 bits (59), Expect = 6.5 Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 2/92 (2%) Query: 43 MDTAMDNLVMLVFIWMVLSIAIIAIAKWAYGRFAKKTTDAD-KPKIDETKNTTNEIVSSA 101 + ++NL++L ++ ++ ++ + K YG + T A KP+I + ++ E + ++ Sbjct: 110 LSPTLENLIVLTWLRLIHP-SLPRLVKQRYGTELRSRTLASIKPEISQALSSLLEEIRTS 168 Query: 102 DSVLATSAKVKSASFKPTKATGFVPATPPNKK 133 D + V + +KP + P + K Sbjct: 169 DDAKILRSAVSNNQWKPAPNSKTTSRKPRSSK 200 >SB_24414| Best HMM Match : DUF1059 (HMM E-Value=2.8) Length = 212 Score = 27.5 bits (58), Expect = 8.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Query: 94 TNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGR 137 T+EI +A+S+LA VK S A + PNKK R Sbjct: 165 TDEICRAAESMLAQMKIVKDTSETDVNAVSKFESKKPNKKNYRR 208 >SB_7955| Best HMM Match : SH3_1 (HMM E-Value=0.77) Length = 1002 Score = 27.5 bits (58), Expect = 8.6 Identities = 17/77 (22%), Positives = 35/77 (45%) Query: 89 ETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVK 148 ET +++N + SA++ + S K++GF+P TP + ++ P + Sbjct: 407 ETSSSSNSLHMSANAQSSCSPSENVFPLTNAKSSGFIPHTPAADRGGVLLTLFPVESAHP 466 Query: 149 KHQSVSVPTCTGGDQPS 165 S ++ C ++PS Sbjct: 467 GQSSKALDMCRCSNKPS 483 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.128 0.384 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,292,011 Number of Sequences: 59808 Number of extensions: 242428 Number of successful extensions: 953 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 943 Number of HSP's gapped (non-prelim): 28 length of query: 209 length of database: 16,821,457 effective HSP length: 79 effective length of query: 130 effective length of database: 12,096,625 effective search space: 1572561250 effective search space used: 1572561250 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 58 (27.5 bits)
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