Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000145-TA|BGIBMGA000145-PA|undefined
(209 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 26 0.19
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 26 0.19
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 0.19
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 0.19
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.33
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 3.1
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 21 9.4
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 9.4
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 26.2 bits (55), Expect = 0.19
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 75 FAKKTTDADKPKIDETKNTTNEIVS-SADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133
F + + D + P ++E + I+ +A V T+ +V+ PT G + T P K
Sbjct: 46 FIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKT 105
Query: 134 RLGRMSPGPEQLTVKKHQS 152
++ +++ KK S
Sbjct: 106 KMIAHLKDKKKIRAKKRWS 124
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 26.2 bits (55), Expect = 0.19
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 75 FAKKTTDADKPKIDETKNTTNEIVS-SADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133
F + + D + P ++E + I+ +A V T+ +V+ PT G + T P K
Sbjct: 360 FIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKT 419
Query: 134 RLGRMSPGPEQLTVKKHQS 152
++ +++ KK S
Sbjct: 420 KMIAHLKDKKKIRAKKRWS 438
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.19
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 75 FAKKTTDADKPKIDETKNTTNEIVS-SADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133
F + + D + P ++E + I+ +A V T+ +V+ PT G + T P K
Sbjct: 593 FIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKT 652
Query: 134 RLGRMSPGPEQLTVKKHQS 152
++ +++ KK S
Sbjct: 653 KMIAHLKDKKKIRAKKRWS 671
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 26.2 bits (55), Expect = 0.19
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 75 FAKKTTDADKPKIDETKNTTNEIVS-SADSVLATSAKVKSASFKPTKATGFVPATPPNKK 133
F + + D + P ++E + I+ +A V T+ +V+ PT G + T P K
Sbjct: 593 FIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTTVRVRPPKVYPTPYGGRLVWTLPGKT 652
Query: 134 RLGRMSPGPEQLTVKKHQS 152
++ +++ KK S
Sbjct: 653 KMIAHLKDKKKIRAKKRWS 671
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 25.4 bits (53), Expect = 0.33
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 79 TTDADKPKIDETKNTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRM 138
T+ +D + +T+ ++ S S A+ S P A P TPPN + L +
Sbjct: 58 TSGSDFHSSSPSSDTSQDLQHSYQSPQTQPARFYSTPIVPHFAYNHNPLTPPNSEPL--V 115
Query: 139 SPGPEQ 144
SP E+
Sbjct: 116 SPKSEK 121
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 22.2 bits (45), Expect = 3.1
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 30 AEAVDDLICSFDYMDTAMDNL--VMLV----FIWMVLSIAIIAIAKWAY 72
A D +IC D AM L LV FIW+VLS + A A A+
Sbjct: 465 ANFYDAMICVAYKFDAAMMALRTSFLVNDFGFIWLVLSSTVRAYASRAF 513
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 20.6 bits (41), Expect = 9.4
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 102 DSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVK 148
+ V+ AS P + A+P + L PG Q+ VK
Sbjct: 146 NKVVTPKTSPNEASMSPQSTSSNNSASPKACQFLYNQFPGSSQVVVK 192
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 20.6 bits (41), Expect = 9.4
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 102 DSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVK 148
+ V+ AS P + A+P + L PG Q+ VK
Sbjct: 166 NKVVTPKTSPNEASMSPQSTSSNNSASPKACQFLYNQFPGSSQVVVK 212
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.128 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,151
Number of Sequences: 317
Number of extensions: 1890
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 209
length of database: 114,650
effective HSP length: 54
effective length of query: 155
effective length of database: 97,532
effective search space: 15117460
effective search space used: 15117460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)
- SilkBase 1999-2023 -