Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000142-TA|BGIBMGA000142-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR000183|Orn/DAP/Arg
decarboxylase 2
         (93 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   0.69 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   3.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   6.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 0.69
 Identities = 11/39 (28%), Positives = 29/39 (74%), Gaps = 3/39 (7%)

Query: 29  AMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTL 67
           A+K+LK++   ++++  + T+ E  ++++VR+ P++V+L
Sbjct: 481 AVKMLKESPTSEEIR--QFTQ-EINIMKSVRQHPYIVSL 516


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 2   ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIV 39
           ++ L  + Y K+    ++   DE  ++  KV+K  +I+
Sbjct: 91  LTHLLETQYAKIRTENQKKIFDESVIFERKVMKNFAIL 128


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 61  CPFLVTLHYAFQTDAKLHLILESSNNGK 88
           CP + T     Q     HLIL+  N+ K
Sbjct: 162 CPIVTTGIIKIQFATCAHLILQRVNHVK 189


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,538
Number of Sequences: 317
Number of extensions: 557
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 93
length of database: 114,650
effective HSP length: 48
effective length of query: 45
effective length of database: 99,434
effective search space:  4474530
effective search space used:  4474530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)