Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000142-TA|BGIBMGA000142-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR000183|Orn/DAP/Arg
decarboxylase 2
(93 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 74 3e-15
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 64 4e-12
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 62 2e-11
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 60 5e-11
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 57 4e-10
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 56 7e-10
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 54 3e-09
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 54 5e-09
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 52 1e-08
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 49 1e-07
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 47 5e-07
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 47 5e-07
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 45 2e-06
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 45 2e-06
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 42 2e-05
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 41 3e-05
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 38 3e-04
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 35 0.002
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 31 0.028
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 28 0.20
SPCC126.13c |||histone deacetylase complex subunit, SAP128 famil... 27 0.46
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 27 0.46
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 1.4
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 1.4
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 25 2.4
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 25 2.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 23 5.6
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 23 9.8
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 23 9.8
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 74.1 bits (174), Expect = 3e-15
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 4/83 (4%)
Query: 9 AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
+YGKV LV+++ + G+L+A K LKKASIV + K E T+ ERQ+LE VR PF+ L+
Sbjct: 101 SYGKVLLVKQK---NTGRLFAQKQLKKASIVLRAKGLEQTKNERQILEEVRH-PFICRLY 156
Query: 69 YAFQTDAKLHLILESSNNGKGWS 91
YAFQ +L+LIL+ + G+ +S
Sbjct: 157 YAFQDHDRLYLILQYAPGGELFS 179
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 63.7 bits (148), Expect = 4e-12
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 9 AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
++GKV VRKR D ++YA+K +KKA IV + + +HT ER VL V PF+V L
Sbjct: 240 SFGKVMQVRKR---DTSRIYALKTMKKAHIVSRSEV-DHTLAERTVLAQVNN-PFIVPLK 294
Query: 69 YAFQTDAKLHLILESSNNGK 88
++FQ+ KL+L+L N G+
Sbjct: 295 FSFQSPGKLYLVLAFVNGGE 314
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 61.7 bits (143), Expect = 2e-11
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 1 LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
+I P+ +G V+L RK G++YA+KVL+K ++ K + A + + ER VL A E
Sbjct: 566 IIKPISKGTFGTVYLSRKNT---TGEIYAIKVLRKVDMISKNQVA-NVKAERAVLMAQEE 621
Query: 61 CPFLVTLHYAFQTDAKLHLILESSNNG 87
F+ L+YAFQ+ L+L++E N G
Sbjct: 622 SAFVAKLYYAFQSRDYLYLVMEFMNGG 648
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 60.1 bits (139), Expect = 5e-11
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 1 LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
++ P+ A+G V+L +KR G +A+K+LKK++++ K + + R ER +L + E
Sbjct: 591 ILKPISKGAFGSVYLAQKRT---TGDYFAIKILKKSNMIAKNQVI-NVRAERAILMSQGE 646
Query: 61 CPFLVTLHYAFQTDAKLHLILESSNNG 87
PF+ L+Y FQ+ L+L++E N G
Sbjct: 647 SPFVAKLYYTFQSKDYLYLVMEYLNGG 673
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 57.2 bits (132), Expect = 4e-10
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 10 YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVL--EAVRECPFLVTL 67
+G+V+LVRK D ++YAMK + K IV+K K HT ER +L ++ E PF+V L
Sbjct: 313 FGQVYLVRKN---DTNRIYAMKKISKKLIVRK-KEVTHTLGERNILVRTSLDESPFIVGL 368
Query: 68 HYAFQTDAKLHLILESSNNGK 88
++FQT + L+LI + + G+
Sbjct: 369 KFSFQTASDLYLITDYMSGGE 389
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 56.4 bits (130), Expect = 7e-10
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 10 YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVL--EAVRECPFLVTL 67
+G+V+LVRK+ D ++YAMKVL K IV++ + A HT ER +L + + PF+V L
Sbjct: 277 FGQVYLVRKK---DTERVYAMKVLSKKVIVRRKEVA-HTVGERDILVQTSAADSPFIVAL 332
Query: 68 HYAFQTDAKLHLILESSNNGK 88
++FQT L+L+ + G+
Sbjct: 333 RFSFQTPKDLYLVTDYMAGGE 353
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 54.0 bits (124), Expect = 3e-09
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 11 GKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYA 70
G+V+LVR++ GK YAMKVL K ++++ K+ + E+ +L A PF+VTL+++
Sbjct: 207 GRVYLVREK---KSGKFYAMKVLSKQEMIKRNKS-KRAFAEQHIL-ATSNHPFIVTLYHS 261
Query: 71 FQTDAKLHLILESSNNGK 88
FQ+D L+L +E G+
Sbjct: 262 FQSDEYLYLCMEYCMGGE 279
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 53.6 bits (123), Expect = 5e-09
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 9 AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
A+G+V LV+K +D GK+YAMK L K + ++ + A H + ER +L + P++V+L+
Sbjct: 103 AFGEVRLVQK---LDTGKIYAMKSLLKTEMFKRDQLA-HVKAERDLL-VESDSPWVVSLY 157
Query: 69 YAFQTDAKLHLILE 82
YAFQ L+LI+E
Sbjct: 158 YAFQDSLYLYLIME 171
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 52.0 bits (119), Expect = 1e-08
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 2 ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQV-LEAVRE 60
+S L +GKV L + E +LYA+KVLKK I++ E T++E++V L A RE
Sbjct: 686 LSVLGKGNFGKVMLAELK---SEKQLYAIKVLKKEFILEN-DEVESTKSEKRVFLVANRE 741
Query: 61 C-PFLVTLHYAFQTDAKLHLILESSNNG 87
PFLV LH FQT+ +++ +++ + G
Sbjct: 742 RHPFLVNLHSCFQTETRIYFVMDFVSGG 769
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 48.8 bits (111), Expect = 1e-07
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 1 LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
L+ L YG V+L +KR + +L AMK++KK+++ Q+L +H ER +L
Sbjct: 164 LLVKLGQGGYGSVWLAKKR---NTHELLAMKMMKKSTL-QQLNEVKHILNERDILTNTNS 219
Query: 61 CPFLVTLHYAFQTDAKLHLILE 82
+LV L+YAFQ K++L +E
Sbjct: 220 -EWLVKLYYAFQDKEKVYLAME 240
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 46.8 bits (106), Expect = 5e-07
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 11 GKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYA 70
GKV+LVR++ +L+AMK+L K ++++ K E+++L + PF+VTL+++
Sbjct: 167 GKVYLVRQK---SNHRLFAMKILNKREMIKRHKV-NRVLAEQEILTKSKH-PFIVTLYHS 221
Query: 71 FQTDAKLHLILESSNNGK 88
FQ+ L+L +E G+
Sbjct: 222 FQSRDYLYLCMEYCAGGE 239
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 46.8 bits (106), Expect = 5e-07
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 1 LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
L+ + AYG+V+L +KR GK +A+K++ K+S+ LK + E++ + R
Sbjct: 530 LLKEINRGAYGRVYLAKKR---SSGKYFALKMIPKSSL-DSLKKIKGLLLEKRNMHIQRY 585
Query: 61 CPFLVTLHYAFQTDAKLHLILESSNNG 87
P V L+YAF + L L+++ N G
Sbjct: 586 GPNTVKLYYAFDSGDYLCLVMDYFNGG 612
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 44.8 bits (101), Expect = 2e-06
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 2 ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVREC 61
+ L ++G+V LV+ YA+KVL+K IV +K EHT ER +L V+
Sbjct: 204 LQTLGTGSFGRVHLVQSN---HNRLYYAIKVLEKKKIVD-MKQIEHTCDERYILSRVQH- 258
Query: 62 PFLVTLHYAFQTDAKLHLILESSNNGKGWSI 92
PF+ L FQ L ++++ + G+ +S+
Sbjct: 259 PFITILWGTFQDAKNLFMVMDFAEGGELFSL 289
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 44.8 bits (101), Expect = 2e-06
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 10 YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE--CPFLVTL 67
+GKV L + K YA+KVLKK +I+ K + E +TE+ V E + PFL+ L
Sbjct: 675 FGKVMLAEYKVN---KKFYAIKVLKKEAIL-KNEELESLKTEKHVFEVANKEKHPFLLNL 730
Query: 68 HYAFQTDAKLHLILE 82
+FQT +++ ++E
Sbjct: 731 FASFQTSTRVYFVME 745
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 41.5 bits (93), Expect = 2e-05
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 11 GKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYA 70
G VR+ K YA+KVL K IV++ K ++ ER + + P + L +
Sbjct: 63 GSFSKVRRATDKKSWKEYAIKVLDKKYIVKENKV-KYVNIERDSMMRLNGFPGISRLFHT 121
Query: 71 FQTDAKLHLILESSNNGK 88
FQ D KL+ +LE + NG+
Sbjct: 122 FQDDLKLYYVLELAPNGE 139
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 40.7 bits (91), Expect = 3e-05
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 2 ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVREC 61
+S + AYG V+ K I +G LYA+K L K + +K K + E + V
Sbjct: 21 VSIIGAGAYGVVY---KAEDIYDGTLYAVKALCKDGLNEKQKKLQ--ARELALHARVSSH 75
Query: 62 PFLVTLHYAFQTDAKLHLILESSNNG 87
P+++TLH +T+ ++++L+ NG
Sbjct: 76 PYIITLHRVLETEDAIYVVLQYCPNG 101
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 37.5 bits (83), Expect = 3e-04
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 28 YAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESSNNG 87
YA+KVL K I+++ K ++ E++ L + + P + L Y FQ L+ +L + NG
Sbjct: 125 YAIKVLDKRHIIKE-KKEKYVNIEKEALCILSKHPGFIKLFYTFQDAHNLYFVLSLARNG 183
Query: 88 K 88
+
Sbjct: 184 E 184
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 35.1 bits (77), Expect = 0.002
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 11 GKVFLVRKRCGIDEGKLYAMKVLKKASIV---QKLKTAEHTRTERQVLEAVRECPFLVTL 67
G +V+ ++ GK YA+K++ K I+ + + E + E +L+++ P +V
Sbjct: 176 GTFAVVKLAVEVNSGKWYAIKIINKRKILLTSSEKRATEMFQREIDILKSLHH-PGVVQC 234
Query: 68 HYAFQTDAKLHLILESSNNG 87
H F+ D +L +++E G
Sbjct: 235 HEIFENDDELFIVMEYVEGG 254
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 31.1 bits (67), Expect = 0.028
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 27 LYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESSNN 86
+Y +K+LKK + K E E +L+ ++ CPF+V L + + + L L+ N
Sbjct: 316 VYVVKMLKKNAA--KFTGKERHLQEVSILQRLQACPFVVNLVNVWSYNDNIFLQLDYCEN 373
Query: 87 G 87
G
Sbjct: 374 G 374
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 28.3 bits (60), Expect = 0.20
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 10 YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
Y ++ +++ GI G LY K +++ +L+ EH + ++++ + P L ++
Sbjct: 148 YRILYFIKRNLGI--GSLY--KESSTNTVIYRLRRREHLK---KIIDIFDQFPLLTKKYW 200
Query: 70 AFQTDAKLHLILESSN 85
+ K LILE +N
Sbjct: 201 DYYLFKKAFLILEDAN 216
>SPCC126.13c |||histone deacetylase complex subunit, SAP128 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 145
Score = 27.1 bits (57), Expect = 0.46
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 56 EAVRECPFLVTLHYAFQT 73
+AV CPFL+++++ FQT
Sbjct: 18 DAVGPCPFLISVYHQFQT 35
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 0.46
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 16 VRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
+ CG DEG LY ++VLK+ V + + R ++L R +H
Sbjct: 208 INNLCGPDEGVLYFLEVLKQICSVVYVDSYHSNRLLSRILLVERNSKGQSVMH 260
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 1.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 17 RKRCGIDEGKLYAMKVLKKASIVQKLK 43
RKR + KL A K+ K A IVQK K
Sbjct: 28 RKRSEVRAEKLKARKLQKAAEIVQKQK 54
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 1.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 19 RCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHY----AFQTD 74
R G+D A++ + V A + V EA ++CP L T H A +++
Sbjct: 45 RLGLDHSVPLAVQQWQGLIAVNYAARAANISRHETVTEAKKKCPELCTAHVKTWKAGESE 104
Query: 75 AKLH 78
AK H
Sbjct: 105 AKYH 108
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 24.6 bits (51), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 70 AFQTDAKLHLILESSNNGKGWSI 92
AF T + E++NNG+GW I
Sbjct: 630 AFYTLPEYEYWKEANNNGRGWKI 652
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 24.6 bits (51), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 22 IDEGKLYAMKV-LKKASIVQKLKTAEHTRTERQVLEAVRECPFLV 65
ID +YA V +KA I+QKLK +H V + + + P LV
Sbjct: 709 IDFSDVYAEAVPSQKAEIIQKLKDQKH--CVAMVGDGINDSPSLV 751
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 23.4 bits (48), Expect = 5.6
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 9 AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
A+G V+ + I G+ A+K +K + +++ + + E +L+ + + P +V
Sbjct: 19 AFGAVY---RGLNIKNGETVAVKKVKLSKMLKSDLSV--IKMEIDLLKNL-DHPNIVKYR 72
Query: 69 YAFQTDAKLHLILESSNNGKGWSI 92
++QT+ L +ILE NG SI
Sbjct: 73 GSYQTNDSLCIILEYCENGSLRSI 96
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 10 YGKVFLVRKRCGIDEGKLYAM 30
+G FL++K C D K Y M
Sbjct: 331 HGLAFLLQKYCDYDADKRYQM 351
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 22.6 bits (46), Expect = 9.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 47 HTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESS 84
H R R+ L+A++ P L AF AK HLIL+ S
Sbjct: 308 HPRVNRETLDAIKASPILAD-EGAFY--AK-HLILDLS 341
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.137 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,148
Number of Sequences: 5004
Number of extensions: 11225
Number of successful extensions: 82
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 29
length of query: 93
length of database: 2,362,478
effective HSP length: 62
effective length of query: 31
effective length of database: 2,052,230
effective search space: 63619130
effective search space used: 63619130
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 46 (22.6 bits)
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