SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000142-TA|BGIBMGA000142-PA|IPR011009|Protein
kinase-like, IPR000719|Protein kinase, IPR000183|Orn/DAP/Arg
decarboxylase 2
         (93 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30262| Best HMM Match : No HMM Matches (HMM E-Value=.)             133   2e-32
SB_58868| Best HMM Match : Pkinase (HMM E-Value=1.9e-32)               61   1e-10
SB_9887| Best HMM Match : Pkinase (HMM E-Value=4.1e-37)                57   2e-09
SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)               53   4e-08
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)               50   2e-07
SB_20101| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   3e-07
SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   2e-06
SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   2e-06
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   7e-06
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)               44   2e-05
SB_21476| Best HMM Match : Pkinase_C (HMM E-Value=0.001)               43   4e-05
SB_35776| Best HMM Match : Pkinase (HMM E-Value=0)                     40   3e-04
SB_50960| Best HMM Match : Pkinase (HMM E-Value=0)                     38   8e-04
SB_17930| Best HMM Match : Pkinase (HMM E-Value=0)                     37   0.003
SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)                36   0.006
SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)               34   0.018
SB_17593| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.17 
SB_14304| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.22 
SB_33829| Best HMM Match : Pkinase (HMM E-Value=0)                     28   0.90 
SB_50426| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.1  
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 27   2.1  
SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.8  
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)                    27   2.8  
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)                      26   3.7  
SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.8  
SB_43599| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   6.4  
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)                    25   6.4  
SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15)         25   6.4  
SB_32381| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)               25   8.4  
SB_21600| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)               25   8.4  
SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014)                  25   8.4  

>SB_30262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score =  133 bits (321), Expect = 2e-32
 Identities = 64/88 (72%), Positives = 74/88 (84%)

Query: 1   LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
           L+  L   AYGKVFL RKR G  +G+L+AMKVLKKA+IVQK KTAEHTRTERQVLEAVR 
Sbjct: 36  LLRVLGTGAYGKVFLARKRGGHHDGRLFAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR 95

Query: 61  CPFLVTLHYAFQTDAKLHLILESSNNGK 88
           CPFLVTLH+AFQT+AKLHLI++  N G+
Sbjct: 96  CPFLVTLHWAFQTEAKLHLIMDYVNGGE 123


>SB_58868| Best HMM Match : Pkinase (HMM E-Value=1.9e-32)
          Length = 434

 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)

Query: 1  LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRE 60
          L+  L   ++GKVFLVRK  G D G LYAMKVLKKA++  K++    T  ER +L  V+ 
Sbjct: 31 LLKVLGQGSFGKVFLVRKVIGADAGTLYAMKVLKKATL--KVRDRMRTMKERDILVDVQH 88

Query: 61 CPFLVTLHYAF 71
           PF+V L+Y F
Sbjct: 89 -PFIVRLNYDF 98


>SB_9887| Best HMM Match : Pkinase (HMM E-Value=4.1e-37)
          Length = 256

 Score = 57.2 bits (132), Expect = 2e-09
 Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 5/74 (6%)

Query: 9   AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
           A+G+V LV+K+   D G +YAMK+L+KA +++K + A H R ER +L A  E  ++V ++
Sbjct: 60  AFGEVRLVQKQ---DTGHVYAMKILRKADMLEKEQVA-HARAERDIL-AEAENQWVVKMY 114

Query: 69  YAFQTDAKLHLILE 82
           Y+FQ D  L L++E
Sbjct: 115 YSFQDDYYLFLVME 128


>SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1184

 Score = 52.8 bits (121), Expect = 4e-08
 Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 5/81 (6%)

Query: 2   ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVREC 61
           I  + + A+G+V+LVRK    D   LYAMK+L+K+ + ++   A H + ER +L A  + 
Sbjct: 659 IRTIGIGAFGEVWLVRKT---DTSMLYAMKILRKSEVFRR-NQAAHVKAERDIL-AEADN 713

Query: 62  PFLVTLHYAFQTDAKLHLILE 82
            ++V L+Y+FQ    L+ +++
Sbjct: 714 EWVVKLYYSFQDQENLYFVMD 734


>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 937

 Score = 50.4 bits (115), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 2   ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVREC 61
           I  L   ++GKV L  ++ G DE  +YA+K+LKK S++Q     E T  ER+VL      
Sbjct: 279 IKVLGKGSFGKVLLAERK-GTDE--VYAIKILKKESVLQD-DDVECTMIERRVLALSAGH 334

Query: 62  PFLVTLHYAFQTDAKLH 78
           PFL +LH +FQT +  H
Sbjct: 335 PFLTSLHSSFQTVSAKH 351


>SB_20101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 161

 Score = 50.0 bits (114), Expect = 3e-07
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)

Query: 2   ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVREC 61
           I  L   ++G+V LV+ +      K +AMK+L K  +V KLK  EHT  E+++L+A+   
Sbjct: 46  IKTLGTGSFGRVMLVQHKTS---SKYFAMKILDKQKVV-KLKQVEHTLNEKRILQAI-SF 100

Query: 62  PFLVTLHYAFQ 72
           PFLV+L + F+
Sbjct: 101 PFLVSLEWHFK 111


>SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 10  YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
           +G+V L R R G   G+ YA+K++  + ++ +LK  EH + E+ +L ++ E PF+V L +
Sbjct: 52  FGRVLLARDRRG---GEFYALKIMNISEVI-RLKQVEHVQNEKNILMSI-EHPFIVNLLW 106

Query: 70  AFQTDAKLHLILESSNNGK 88
                  L+++LE +  G+
Sbjct: 107 TQHDQTFLYMLLEYACGGE 125


>SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 456

 Score = 46.8 bits (106), Expect = 2e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 1   LISPLFVSAYGKVFLVRKRCGIDEGK-LYAMKVLKKASIVQKLKTAEHTRTERQVLEAVR 59
           L+  L   ++GKV L    C + E K  +A+K LKK  +V +    E T  ER+VL    
Sbjct: 289 LLKVLGKGSFGKVLL----CELKETKEFFAIKALKK-DVVLEDDDVECTMVERRVLALAT 343

Query: 60  ECPFLVTLHYAFQTDAKLHLILESSNNG 87
             PFL  LH AFQ+   L  ++E  N G
Sbjct: 344 RHPFLTHLHSAFQSADHLFFVMEYLNGG 371


>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1161

 Score = 45.2 bits (102), Expect = 7e-06
 Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 9   AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
           A+G+V +VR++      ++YAMK L K  ++++ +TA   + ER VL    +  ++ TLH
Sbjct: 88  AFGEVTVVRQK---SSERIYAMKTLNKWEMLKRAETACF-KEERDVL-VYGDKRWITTLH 142

Query: 69  YAFQTDAKLHLILESSNNG 87
           YAFQ D  L+ +++  + G
Sbjct: 143 YAFQDDDYLYFVMDYYSGG 161


>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4865

 Score = 43.6 bits (98), Expect = 2e-05
 Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 5/74 (6%)

Query: 9    AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
            A+GKV +V+K+   D   +YAMK + K++ ++K     +   E ++L+ + E PF+V L 
Sbjct: 4121 AFGKVCIVQKK---DTKAMYAMKYMNKSACIKK-DAVRNVLRELEILQTI-EHPFIVNLW 4175

Query: 69   YAFQTDAKLHLILE 82
            ++FQ +  + ++++
Sbjct: 4176 FSFQDEEDIFMVVD 4189


>SB_21476| Best HMM Match : Pkinase_C (HMM E-Value=0.001)
          Length = 257

 Score = 42.7 bits (96), Expect = 4e-05
 Identities = 22/44 (50%), Positives = 28/44 (63%)

Query: 1   LISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKT 44
           L+  L    YGKVFLV+K  G  + K++AMKVLKK SI +   T
Sbjct: 67  LLKVLGKGGYGKVFLVKKNHGHSKEKIFAMKVLKKESIFENSLT 110


>SB_35776| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 558

 Score = 39.9 bits (89), Expect = 3e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 10  YGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
           +G+V +V+ +     G +YAMK LKK+  + +   A     ER+++ A    P++ +L Y
Sbjct: 92  FGEVQVVKDKA---TGDVYAMKTLKKSQTLSEEAVA-FFEEEREIM-ATANNPWITSLQY 146

Query: 70  AFQTDAKLHLILESSNNG 87
           AFQ    L+L+++    G
Sbjct: 147 AFQDSHSLYLVMDYHPGG 164


>SB_50960| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 632

 Score = 38.3 bits (85), Expect = 8e-04
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 25  GKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESS 84
           GK+YAMK L+K  I ++ K       E+ +LE + +  F+V+L YA++T   L ++L   
Sbjct: 108 GKMYAMKKLEKKRIKRR-KGEAMALNEKTLLEKI-DSIFVVSLAYAYETKDALCMVLTLM 165

Query: 85  NNG 87
           N G
Sbjct: 166 NGG 168


>SB_17930| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 286

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 49  RTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESSNNG 87
           +TE+ V E     PFLV LH  FQT ++L  ++E  + G
Sbjct: 71  QTEKHVFEQASNHPFLVGLHSCFQTSSRLFFVIEYVSGG 109


>SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)
          Length = 348

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 2   ISPLFVSAYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVR-E 60
           IS L    +GK  L   R      +L+A+K LKK  I+ + +       +R  L A +  
Sbjct: 175 ISVLGRGHFGKAILAEYRT---TNELFAIKALKKGDIIAREEVESLLAEKRIFLTANKTR 231

Query: 61  CPFLVTLHYAFQTDAKLHLILESSNNG 87
            PFLV L   FQT   +  ++E +  G
Sbjct: 232 HPFLVNLFACFQTQEHVCFVMEYAPGG 258


>SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)
          Length = 465

 Score = 33.9 bits (74), Expect = 0.018
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 25/81 (30%)

Query: 9   AYGKVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLH 68
           ++GKVFL + +    E K YA+KVL K++I          R E               LH
Sbjct: 199 SFGKVFLSKNK---QEDKFYAIKVLNKSAI--------RKRNEG--------------LH 233

Query: 69  YAFQTDAKLHLILESSNNGKG 89
           Y+FQT  KL+ +L+  N G+G
Sbjct: 234 YSFQTKDKLYFVLDYVNGGEG 254


>SB_17593| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 225

 Score = 30.7 bits (66), Expect = 0.17
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 61 CPFLVTLHYAFQTDAKLHLILESSNNGKGW 90
          CPF+V L+  ++T   + L+LE +  G+ W
Sbjct: 53 CPFMVRLYSHYETANSIFLLLEHARGGRLW 82


>SB_14304| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1219

 Score = 30.3 bits (65), Expect = 0.22
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 6/65 (9%)

Query: 25  GKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECP--FLVTLHYAFQTDAKLHLILE 82
           G+  A+K+++KA    KL +    +  R+ +EA+R+    ++++L    ++  + +L+LE
Sbjct: 92  GRNVAVKIIEKA----KLSSKSFNKFMRREVEALRQVDHKYVISLIEVLESSKRFYLVLE 147

Query: 83  SSNNG 87
            + NG
Sbjct: 148 LAQNG 152


>SB_33829| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 290

 Score = 28.3 bits (60), Expect = 0.90
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 26 KLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESSN 85
          K  A+K++ K        T    R E QV++ +     +V+LH A +T +++++IL+ ++
Sbjct: 16 KQVAVKIVTKKKAPDDYLTKFLPR-EIQVMKHLNHSN-VVSLHEAIETSSRIYIILDLAD 73

Query: 86 NG 87
          NG
Sbjct: 74 NG 75


>SB_50426| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 14  FLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
           FL+   C  D G + +M V  K      + T   +   R  L A+R+ PFLV L+Y
Sbjct: 67  FLIGYSCARD-GHVGSMNVAVKHEPTGSIATRLSSSVNRYSL-ALRDMPFLVLLYY 120


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 11/20 (55%), Positives = 16/20 (80%)

Query: 63  FLVTLHYAFQTDAKLHLILE 82
           FL+ L Y+FQT +KL+ IL+
Sbjct: 390 FLLGLKYSFQTSSKLYYILQ 409


>SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1103

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 38  IVQKLKTAEHTRTERQVLEAVREC 61
           I+    TAEH R   +VLE  REC
Sbjct: 465 IIAGKTTAEHDRALHKVLERAREC 488


>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
          Length = 1358

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)

Query: 38  IVQKLKTAEHTRTERQVLEAVREC 61
           I+    TAEH R   +VLE  REC
Sbjct: 655 IIAGKTTAEHDRALHKVLERAREC 678


>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
          Length = 454

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 15  LVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQ 53
           ++ +R G D+  +YA+KVLKK  IVQ     E T TE++
Sbjct: 348 MLAERKGTDQ--VYAIKVLKKDVIVQD-DDVECTMTEKR 383


>SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 38  IVQKLKTAEHTRTERQVLEAVRECPFLVTLHYAFQTDAKLHLILESSNNGKG 89
           +V+ L+ AE +RT RQV+          T+H+   TD +  +   +   G+G
Sbjct: 679 VVESLRAAEISRTHRQVISGKPYSSQAETIHH---TDKRQPIRRNNLRKGRG 727


>SB_43599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 484

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query: 63  FLVTLHYAFQTDAKLHLILESS 84
           F   LH A Q+  KLHLIL+ S
Sbjct: 277 FCNPLHVAVQSSEKLHLILDLS 298


>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
          Length = 832

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 12  KVFLVRKRCGIDEGKLYAMKVLKKASIVQKLKTAEHTRTERQVLE 56
           K+ L RKR      ++   K+++K  + QK++     R   Q+ +
Sbjct: 321 KILLERKRRAAKRARIRHEKLMRKLRLQQKMEEQRRRRRAHQIAQ 365


>SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15)
          Length = 267

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 38  IVQKLKTAEHTRTERQVLEAVRECP----FLVTLHYAFQTDAKLHLILESSNNGK 88
           ++QK++  +H R ++Q L  +R+ P    ++     A     + HL ++S   G+
Sbjct: 197 VIQKIEVLKHERRDKQALWYLRDYPPALSYVSATMKALPYKKEPHLYVQSKEEGQ 251


>SB_32381| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)
          Length = 282

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 38  IVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
           +V+ L++AE +RT RQV+          T+H+
Sbjct: 156 VVESLRSAEISRTHRQVISGKPYSSQAETIHH 187


>SB_21600| Best HMM Match : zf-CCHC (HMM E-Value=6.9e-07)
          Length = 216

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 38 IVQKLKTAEHTRTERQVLEAVRECPFLVTLHY 69
          +V+ L++AE +RT RQV+          T+H+
Sbjct: 11 VVESLRSAEISRTHRQVISGKPYSSQAETIHH 42


>SB_26251| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
          Length = 391

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 26  KLYAMKVLKKASIVQKLKTAEHTRTERQVLE 56
           +LYA++VL+KA I Q      +    R VLE
Sbjct: 296 RLYALRVLRKAGIQQSDMVLIYCSLIRSVLE 326


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.324    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,780,451
Number of Sequences: 59808
Number of extensions: 84445
Number of successful extensions: 458
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 35
length of query: 93
length of database: 16,821,457
effective HSP length: 70
effective length of query: 23
effective length of database: 12,634,897
effective search space: 290602631
effective search space used: 290602631
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 52 (25.0 bits)

- SilkBase 1999-2023 -