GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000141-TA|BGIBMGA000141-PA|undefined
         (174 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EQV9 Cluster: Putative uncharacterized protein; n=1; ...    36   0.68 
UniRef50_Q9VZY7 Cluster: CG32297-PA; n=2; Drosophila melanogaste...    35   0.90 
UniRef50_Q7WHT0 Cluster: Propionate catabolism operon regulatory...    33   2.7  
UniRef50_Q7RD43 Cluster: Putative uncharacterized protein PY0558...    33   2.7  
UniRef50_Q13428 Cluster: Treacle protein; n=11; Catarrhini|Rep: ...    33   3.6  
UniRef50_Q9FZA6 Cluster: F3H9.2 protein; n=4; Arabidopsis thalia...    33   4.8  

>UniRef50_A2EQV9 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1057

 Score = 35.5 bits (78), Expect = 0.68
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 47   KLKRRHSAQKHKKLPPKKVRTEPPXXXXXXXXXXXXDKSVEIVECSAPLKDIREESAPVA 106
            K K+    +K K+ P KK RT+              +K VE VE     KD  ++     
Sbjct: 970  KTKKSKDDEKQKEEPKKKKRTKKQRLADDSSSSSDEEKEVEEVE-KENEKDKAKKKKSTD 1028

Query: 107  GPSKRSSSVELIGGTVP 123
             P K+ +  +L+G T P
Sbjct: 1029 KPKKKQTKRKLVGSTKP 1045


>UniRef50_Q9VZY7 Cluster: CG32297-PA; n=2; Drosophila
           melanogaster|Rep: CG32297-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 883

 Score = 35.1 bits (77), Expect = 0.90
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 108 PSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRK 142
           P  RS+   L+GGT+P P R  I WN    S   K
Sbjct: 619 PQHRSTVTPLVGGTLPTPVRRQIFWNTAQISTTTK 653


>UniRef50_Q7WHT0 Cluster: Propionate catabolism operon regulatory
           protein; n=2; Bordetella|Rep: Propionate catabolism
           operon regulatory protein - Bordetella bronchiseptica
           (Alcaligenes bronchisepticus)
          Length = 642

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 91  CSAPLKDIREESAPVAGPSKRSSSVELIGGTVP---APARDSIDWNLVDA 137
           C    + IRE +APV    +  ++++++ GT     A ARD I+ N VDA
Sbjct: 14  CFVSYRQIREFAAPVIAEYRNRAAIDVVDGTFADALAVARDRIERNAVDA 63


>UniRef50_Q7RD43 Cluster: Putative uncharacterized protein PY05582;
            n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY05582 - Plasmodium yoelii yoelii
          Length = 1611

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 128  DSIDWNLVDASKIRKRCKDRLVLSIYSYENTRLTEIENLRLNYQYN 173
            DS+  N+   S ++K+ KD ++   Y   N  + +IE ++LN   N
Sbjct: 1537 DSLPTNIFTESDVKKKEKDHIINGDYEVTNNNIDKIEKMKLNNSKN 1582


>UniRef50_Q13428 Cluster: Treacle protein; n=11; Catarrhini|Rep:
           Treacle protein - Homo sapiens (Human)
          Length = 1488

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 32/122 (26%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 11  KKPEHESGYYEGSDQEGSMECGCPXXXXXXXXXXXTKLKRRHSAQKHKKLPPKKVRTEPP 70
           KKPE ES   E S++    E   P             L+ R ++   K  P K     PP
Sbjct: 264 KKPEEES---ESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPP 320

Query: 71  XXXXXXXXXXXXDKSVEIVECSAPLKDIREESAPVAG---PSKRSSSVELIGGTVPAPAR 127
                        K  E  E S+      EE  P A     +K S     + G   APA+
Sbjct: 321 GKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQV-GAASAPAK 379

Query: 128 DS 129
           +S
Sbjct: 380 ES 381


>UniRef50_Q9FZA6 Cluster: F3H9.2 protein; n=4; Arabidopsis
           thaliana|Rep: F3H9.2 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 606

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 95  LKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRKRCKDRLVLSIYS 154
           ++ +R+      G S  S  V++ G T  +   DS+ +   + + IR R KDRL+L I+ 
Sbjct: 420 MRKVRKHVDDDEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIRNREKDRLMLEIFG 479

Query: 155 YENT 158
            E+T
Sbjct: 480 PEST 483


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.310    0.128    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,897,065
Number of Sequences: 1657284
Number of extensions: 5705827
Number of successful extensions: 9999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9993
Number of HSP's gapped (non-prelim): 9
length of query: 174
length of database: 575,637,011
effective HSP length: 95
effective length of query: 79
effective length of database: 418,195,031
effective search space: 33037407449
effective search space used: 33037407449
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 69 (31.9 bits)