Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000141-TA|BGIBMGA000141-PA|undefined
(174 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010052-1|AAQ22521.1| 565|Drosophila melanogaster LD20870p pro... 35 0.053
AE014296-499|AAF47676.2| 883|Drosophila melanogaster CG32297-PA... 35 0.053
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein... 29 3.5
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot... 29 3.5
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA... 29 3.5
AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint pr... 29 4.6
AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U bindi... 29 4.6
AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA... 29 4.6
AY089638-1|AAL90376.1| 348|Drosophila melanogaster RE54320p pro... 28 6.0
AE014296-2264|AAF49827.2| 348|Drosophila melanogaster CG14110-P... 28 6.0
>BT010052-1|AAQ22521.1| 565|Drosophila melanogaster LD20870p
protein.
Length = 565
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 108 PSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRK 142
P RS+ L+GGT+P P R I WN S K
Sbjct: 301 PQHRSTVTPLVGGTLPTPVRRQIFWNTAQISTTTK 335
>AE014296-499|AAF47676.2| 883|Drosophila melanogaster CG32297-PA
protein.
Length = 883
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 108 PSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRK 142
P RS+ L+GGT+P P R I WN S K
Sbjct: 619 PQHRSTVTPLVGGTLPTPVRRQIFWNTAQISTTTK 653
>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 95 LKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRKRCKDRLV 149
LK ++E P+KRS+ G V P D +L D +I C +RLV
Sbjct: 871 LKKLKELGLLFKAPTKRSTKSAQSGKNVWQPEEDDELRSLYDQHRIEPDCLERLV 925
>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 95 LKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRKRCKDRLV 149
LK ++E P+KRS+ G V P D +L D +I C +RLV
Sbjct: 871 LKKLKELGLLFKAPTKRSTKSAQSGKNVWQPEEDDELRSLYDQHRIEPDCLERLV 925
>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 95 LKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSIDWNLVDASKIRKRCKDRLV 149
LK ++E P+KRS+ G V P D +L D +I C +RLV
Sbjct: 871 LKKLKELGLLFKAPTKRSTKSAQSGKNVWQPEEDDELRSLYDQHRIEPDCLERLV 925
>AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint
protein.
Length = 637
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 92 SAPLKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSID 131
S PL D+++ GP RS+ + L+GG +P + + D
Sbjct: 44 SQPLYDLKQTGDVKFGPGTRSALLGLLGGALPKLSSEQHD 83
>AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U binding
splicing factor protein.
Length = 637
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 92 SAPLKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSID 131
S PL D+++ GP RS+ + L+GG +P + + D
Sbjct: 44 SQPLYDLKQTGDVKFGPGTRSALLGLLGGALPKLSSEQHD 83
>AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA,
isoform A protein.
Length = 637
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 92 SAPLKDIREESAPVAGPSKRSSSVELIGGTVPAPARDSID 131
S PL D+++ GP RS+ + L+GG +P + + D
Sbjct: 44 SQPLYDLKQTGDVKFGPGTRSALLGLLGGALPKLSSEQHD 83
>AY089638-1|AAL90376.1| 348|Drosophila melanogaster RE54320p
protein.
Length = 348
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 10 DKKPEHESGYYEGSDQEGSME 30
D+KP H+ Y+ G D++G ++
Sbjct: 124 DQKPPHQPPYFSGGDRDGDLQ 144
>AE014296-2264|AAF49827.2| 348|Drosophila melanogaster CG14110-PA
protein.
Length = 348
Score = 28.3 bits (60), Expect = 6.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 10 DKKPEHESGYYEGSDQEGSME 30
D+KP H+ Y+ G D++G ++
Sbjct: 124 DQKPPHQPPYFSGGDRDGDLQ 144
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.310 0.128 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,028,205
Number of Sequences: 52641
Number of extensions: 283726
Number of successful extensions: 515
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 505
Number of HSP's gapped (non-prelim): 10
length of query: 174
length of database: 24,830,863
effective HSP length: 80
effective length of query: 94
effective length of database: 20,619,583
effective search space: 1938240802
effective search space used: 1938240802
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 59 (27.9 bits)
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