Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000140-TA|BGIBMGA000140-PA|IPR005612|CBF
(1096 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 252 1e-66
At1g79140.1 68414.m09228 expressed protein 34 0.60
At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (... 32 1.8
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 32 1.8
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 32 2.4
At4g19550.1 68417.m02875 expressed protein 32 2.4
At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing pro... 31 3.2
At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1 (e... 31 3.2
At3g28770.1 68416.m03591 expressed protein 31 3.2
At2g44490.1 68415.m05531 glycosyl hydrolase family 1 protein con... 31 3.2
At4g18600.1 68417.m02755 expressed protein 31 4.2
At4g31880.1 68417.m04531 expressed protein 31 5.6
At3g22520.1 68416.m02846 expressed protein 31 5.6
At3g61990.1 68416.m06962 O-methyltransferase family 3 protein se... 30 7.4
At3g01520.1 68416.m00080 universal stress protein (USP) family p... 30 7.4
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 30 7.4
At5g14680.1 68418.m01720 universal stress protein (USP) family p... 30 9.8
At4g10890.1 68417.m01772 expressed protein 30 9.8
At1g52700.1 68414.m05952 phospholipase/carboxylesterase family p... 30 9.8
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 30 9.8
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 30 9.8
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding
transcription factor (CCAAT-binding factor) (CBF)
(Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus
musculus]
Length = 1056
Score = 252 bits (616), Expect = 1e-66
Identities = 182/564 (32%), Positives = 276/564 (48%), Gaps = 58/564 (10%)
Query: 104 PDVKLRTFEQHPLGHLDEMTSGNKQTKRNILKLWYYEDQLKELYGTYVDALNKFAHDTVD 163
PD KL++ Q PL + E G ++L WY+ED LK+ Y +V AL++ + D +
Sbjct: 280 PDRKLKSLLQRPLNIIPENKDGY-----SLLLFWYWEDCLKQRYERFVTALDESSKDMLP 334
Query: 164 ANKEKSVSAMSYLLMHHPEREKILLTNIINKLGDPSQGVASKVIYHLCQIIYNHPNMKGV 223
K+K++ + ++L E+E+ LL +++NKLGDP AS YHL ++ +HPNMK V
Sbjct: 335 ELKDKALKTIYFMLTSKSEQERKLLVSLVNKLGDPQNKSASNADYHLTNLLADHPNMKAV 394
Query: 224 VLAEIEKMLFRTNISPRAQYYGVCFLNQFYLGK--DDSKVAESLIRIYFSFFK-----AS 276
V+ E++ LFR ++ RA+Y+ V FL+Q L +D KVA+ LI +YF+ FK A+
Sbjct: 395 VIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGEDPKVAKRLIDVYFALFKVLTTEAN 454
Query: 277 IKKGEIDS-----------------------RLMSAILT----GVKRAYPFADKERLTE- 308
K+G D L S IL+ GV RA+P+ + +
Sbjct: 455 RKQGADDKGAADKKKSNPKDTKQEVSTDSPIELDSRILSALLTGVNRAFPYVSTDEADDI 514
Query: 309 TQDHIDSIHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILNTTHT 368
+ + +LVH A N+ V +L LL +IS + SDR+Y ALY KL +N++
Sbjct: 515 IESQTPVLFKLVHSANFNVGVQSLMLLDKISSKNKIVSDRFYRALYSKLLLPSAMNSSKA 574
Query: 369 ALLFSLVYKSLKQDKNIPRVVAFVKRLLQLCCYVLPAQACGMIFLLSRVLKDSSKKEAIK 428
+ L+ +++K D NI RV AF KR+LQ+ P ACG +FLLS VLK S+ K
Sbjct: 575 EMFIGLLLRAMKNDINIKRVAAFSKRVLQVALQQPPQYACGCLFLLSEVLK--SRPPLWK 632
Query: 429 LVWNKREVKEEIKSEDVIGPQQDTTENGTDKDGAEPTDIVQDEEVKETXXXXXXXXXXXX 488
+V + V+EE ED I +D E G D D + + DE V E
Sbjct: 633 MVVQRESVEEE---ED-IEHFEDVIE-GDDVDPNKKAE--NDENVVEVDHDGVEKSSRDG 685
Query: 489 XXXXXXEEESYVDLKIDGEGNVX-XXXXXXXXXVPGWFHARVGARPLHDRSETETKIQLK 547
EE + L + + N P + + RS+
Sbjct: 686 DSSSDDEEALAIRLSDEEDDNASDDSEELIRNETPQLEEVMEVSNDMEKRSQ-------- 737
Query: 548 KTINMDKVASAYNPLGRSPQHAGAELSAYTELLLLSRHFHPTVQLFAKKMLSDQLIQYSG 607
+ + Y+P R P + A+ +++ EL +LS+H HP+V A +LS I Y+G
Sbjct: 738 PPMRPSSLPGGYDPRHREPSYCNADRASWWELGVLSKHAHPSVATMAGTLLSGTNIVYNG 797
Query: 608 DPLKDFSGIRFLDRFVFKNPKKRT 631
+PL D S FLD+F+ K PK+ T
Sbjct: 798 NPLNDLSLTAFLDKFMEKKPKQNT 821
>At1g79140.1 68414.m09228 expressed protein
Length = 311
Score = 33.9 bits (74), Expect = 0.60
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 559 YNPLGRSPQHAGAELSAYTELLLLSRHFHPTVQLFA 594
Y P P +GA + EL LLS+H+HP + A
Sbjct: 156 YQPYATDPNLSGALATVLWELSLLSKHYHPAISTMA 191
>At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (Atm)
identical to ataxia-telangiectasia mutated protein (Atm)
[Arabidopsis thaliana] GI:7529272; contains Pfam profile
PF00855: PWWP domain; contains GA donor splice site at
exon 73
Length = 3255
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 150 YVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLTNI-INKLGDPSQGVASKVIY 208
+ D + F V ++KEK V+A L + R+K+ I + L S+ + + ++
Sbjct: 1877 FQDICSSFGIKLVTSSKEKLVTAKDVLAVGPQPRQKMETVIITLMHLAYHSENIELQAVF 1936
Query: 209 HLCQIIYNHPNMKGVVLAEIEKMLFRTNISPRAQY 243
+C + P + +++A ++ + + + R +Y
Sbjct: 1937 MMCAVSAKDPCQRELIIAALDNLSAQLHYPSRFKY 1971
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 32.3 bits (70), Expect = 1.8
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 787 EPAFSGDEDGKDDLSSLFASAEEFSTLLEDTAANKKQGSSQAVSNTDNSSLKQLAWEDKR 846
+P ED KD+ +S ++ T DT KK+G+S + S D + + E K
Sbjct: 880 KPTAESLEDVKDENASKTVDVKQ-ETGSPDT--KKKEGASSS-SKKDTKTGEDKKAEKKN 935
Query: 847 NNWIKGYNKKILGNNKSGGKFKHKMADRK-KTAAKNFGGKIKMQENKFAGKGKRKGGTAN 905
N+ KKI NN + K K+ +++ K +I++++ K + R G
Sbjct: 936 NSETMSEGKKIDRNNTDEKEVKEKVTEKEIKERGGKDESRIQVKDRKKCEEPPRAGFILQ 995
Query: 906 GPENLDLPDDTFRMGLDN 923
N D + LD+
Sbjct: 996 TKRNKDSKLRSLSASLDS 1013
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.9 bits (69), Expect = 2.4
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 939 SVDTARSSVDTPSVLPDFNIPTPM-NTPVNEITPEILLPISETPKIPTETIRK 990
S D TPS + PTP+ TPV++ TP P+ + +PT ++K
Sbjct: 408 SKDKCAGGSSTPSKPSPVHKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQK 460
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 31.9 bits (69), Expect = 2.4
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 803 LFASAEEFSTLLEDTAANKKQGSSQAVSNTDNSSLKQLAWEDKRNNWIKGYNKKILGNNK 862
+F S + L ED + ++ +SN LK+ AWE + KG +K+ K
Sbjct: 21 VFPSRQSKGDLAEDLSDISDAEVAENLSNNKEFILKKRAWELMNPEYQKGKYRKVTTRKK 80
Query: 863 SGGKFKHKMADRKKTAAKNFGGKIKMQENK 892
+K+A KKT+A + + K
Sbjct: 81 KDP--ANKIAPSKKTSATKTESNAETENKK 108
>At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein low similarity to SP|Q01780
Polymyositis/scleroderma autoantigen 2 {Homo sapiens};
contains Pfam profiles PF00570: HRDC domain, PF01612:
3'-5' exonuclease
Length = 838
Score = 31.5 bits (68), Expect = 3.2
Identities = 27/135 (20%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 848 NWIKGYNKKILGN-NKSGGKFKHKMADRKKTAAKNFGGKIKMQENKFAGKGKRKGGTANG 906
+W+ N +++ + S +F+ ++ ++K A N GG + + K A + K G A
Sbjct: 100 DWLCNVNDELIERFDVSVDEFQ-RIRKKEKEIAVNGGGSVI--DVKMAERDKNSSGKAKV 156
Query: 907 PENLDLPDDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPV 966
P ++ T + + ++++ N + ++ + + L F++ ++ V
Sbjct: 157 PFHVP----TIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVDKDV 212
Query: 967 NEITPEILLPISETP 981
NE+ P LP+ +TP
Sbjct: 213 NEMEPVKPLPLEQTP 227
>At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1
(eEF1Balpha1) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686819
Length = 228
Score = 31.5 bits (68), Expect = 3.2
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 787 EPAFSGDEDGKDDLSSLFASAEEFSTLLEDTAANKKQGSSQAVSNTDNSSLKQLAWEDK 845
EPA GD D DD+ E+ E+ A KK S + L+ W+D+
Sbjct: 94 EPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDE 152
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 3.2
Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
Query: 816 DTAANKKQGSSQAVSNTDNSSLKQLAWEDKRNNWIKGYNKKILGNNKSGGKFKHKMADRK 875
D K+ + V N + E K NN +KK+ K D K
Sbjct: 670 DNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDK 729
Query: 876 KTAAKNFGGKIKMQENKFAGKGKRKGGTAN 905
+ A+ +GG+ K + KGK+K N
Sbjct: 730 QEEAQIYGGESK-DDKSVEAKGKKKESKEN 758
>At2g44490.1 68415.m05531 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 560
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 299 PFADKERLTETQDHIDSIHRLVHLAGINISVHALALLFQISDASTGTSDRY 349
P D ERL + HI +IH+ +H G+ + + + L + ++G RY
Sbjct: 416 PSIDTERLEYIEGHIHAIHQAIHEDGVRVEGYYVWSLLDNFEWNSGYGVRY 466
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 31.1 bits (67), Expect = 4.2
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 859 GNNKSGGKFKHKMADRKKTAAKNFGGKIKMQENKFAGKGKRKGGTANGPENLDLPDDTFR 918
G+ G+ ++K K A +N + E K G T GP N P++ F
Sbjct: 1238 GSTTETGR-QNKTFPEKTFATENSLNEAVFDE-KIPGSEASTSTTETGPHNKTFPEEPFA 1295
Query: 919 MGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDF-NIPTPMNTPVNEITPEILLPI 977
M +NF + E V E++ + S+ +T F P + +NE ++P
Sbjct: 1296 M--ENF--LNEAV-FDEKIPGSEAPVSTTETGLHNETFTEEPVATDISLNEAVFGEIIPG 1350
Query: 978 SETPKIPTET 987
SE P TET
Sbjct: 1351 SEAPGSATET 1360
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 30.7 bits (66), Expect = 5.6
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 806 SAEEFSTLLEDTAANKKQGSSQAVSNTDNSSLKQLAWEDKRNNWIKG---YNKKILGNNK 862
+++ T +D A+K + S +A + SS ++ E+ K +KK + +
Sbjct: 719 ASKSSKTSQDDKTASKSKDSKEASREEEASSEEESEEEEPPKTVGKSGSSRSKKDISSVS 778
Query: 863 SGGKFKHKMADRKK-----TAAKNFGGKIKMQENKF-AGKGKRKGGTANGP 907
GK K +++ T++K+ G +K K GKGK K G+A+ P
Sbjct: 779 KSGKSKASSKKKEEPSKATTSSKSKSGPVKSVPAKSKTGKGKAKSGSASTP 829
>At3g22520.1 68416.m02846 expressed protein
Length = 600
Score = 30.7 bits (66), Expect = 5.6
Identities = 44/182 (24%), Positives = 67/182 (36%), Gaps = 24/182 (13%)
Query: 14 EAYTNYGQADKNADDKKGQGIAKNFAESLEYGEKKKWFHQLPE--EPV-TLPKTLSTEQI 70
E T GQ D+NA D KG Y ++K+ P+ EPV PK+
Sbjct: 214 EVQTEVGQNDENAQDGKGNS---------RYSQRKRKPMPTPQTYEPVEAKPKSTPRGSS 264
Query: 71 EQLRKEATSALHG---DTLAYETNAXXXXXXXXXXXPDVKLRTFEQHPLGHLDEMTSGNK 127
+ +K AT+ G T + V L + + NK
Sbjct: 265 NKKKKGATTPATGPQSSTKPKPSRQSGRRTSIQQRGGAVDLNFLNEEESEPATAPKTSNK 324
Query: 128 QTKRNILKLWYYEDQLKELYGTYVDALN---KFAHDTVDANKEKSVSAMSYL--LMHHPE 182
+ KR + YE++ + YV +N +H +D N E+ S ++ L LM P
Sbjct: 325 RKKRGV----NYEEEDVSIPHIYVSPMNGVLAVSHSPIDVNPEEFDSYLNSLDNLMQQPP 380
Query: 183 RE 184
E
Sbjct: 381 EE 382
>At3g61990.1 68416.m06962 O-methyltransferase family 3 protein
several O-methyltransferases - different species;
contains Pfam 01596 O-methyltransferase domain
Length = 290
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 274 KASIKKGEIDSRLMSAILTGVKRAYPFA--DKERLTETQDHIDSIHRLVHLAGI 325
K ++K G LMS I G + +Y FA D ++ Q++ +S+ RLV + G+
Sbjct: 183 KVTVKHGLAAESLMSMIQNGEESSYDFAFLDADK-AMYQEYFESLLRLVRVGGV 235
>At3g01520.1 68416.m00080 universal stress protein (USP) family
protein similar to ER6 protein (GI:5669654)
[Lycopersicon esculentum]; contains Pfam profile
PF00582: universal stress protein family
Length = 175
Score = 30.3 bits (65), Expect = 7.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 793 DEDGKDDLSSLFASAEEFSTLLEDTAA 819
DEDG DD+ S++AS E+F + + A
Sbjct: 57 DEDGFDDVDSIYASPEDFRDMRQSNKA 83
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 30.3 bits (65), Expect = 7.4
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 797 KDDLSSLFAS-AEEFSTLLEDTAANKKQGSS-QAVSNTDNSSLKQLAWEDKRNNWIKGYN 854
+D+++S + EE E TA KK+ S + T + +K+L + ++ W K +
Sbjct: 203 EDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKETLEAEMKKLKVQTEQ--WRKAAD 260
Query: 855 KK---ILGNNKSGGKFKHKMADRKKTAAKNFGGKIKMQENKFAGKGKRK 900
+ G + G+F + +K A F G M ++ G GKRK
Sbjct: 261 AAAAVLSGGVEMNGRFSEQCGSMEKHFAGRFVGSPGMADDSDDGSGKRK 309
>At5g14680.1 68418.m01720 universal stress protein (USP) family
protein similar to ER6 protein [Lycopersicon esculentum]
GI:5669654; contains Pfam profile PF00582: universal
stress protein family
Length = 175
Score = 29.9 bits (64), Expect = 9.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 793 DEDGKDDLSSLFASAEEFSTLLEDTAA 819
DEDG DD+ S++AS ++F + E A
Sbjct: 57 DEDGFDDMDSIYASPDDFRQMRERNKA 83
>At4g10890.1 68417.m01772 expressed protein
Length = 527
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 151 VDALNKFAHDTVDANKEKSVSAMSYLLMH-----HPEREKILLTNIINKLGDPSQGVASK 205
+ AL KFA DT+ + + + Y + HP K L N + G +
Sbjct: 55 LSALLKFAADTLKSQESHDTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRR 114
Query: 206 VIYHLCQ 212
++YHL Q
Sbjct: 115 ILYHLGQ 121
>At1g52700.1 68414.m05952 phospholipase/carboxylesterase family
protein similar to lysophospholipase I [Mus musculus]
GI:1864159; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 255
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 794 EDGKDDLSSLFASAEEFSTLLEDTAANKKQG 824
EDG DDL L ASA + LL A+ K G
Sbjct: 92 EDGHDDLEGLDASASHIANLLSSEPADVKVG 122
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.9 bits (64), Expect = 9.8
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 856 KILGNNKSGGKFKHKMADRKKTAAKNFGGKI---KMQENKFAGKGKRKGGTANGPENLDL 912
K+LG K+ R + + F G K + A K K+ P D
Sbjct: 816 KLLGGKNPMWKYPSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPRVTDP 875
Query: 913 P-DDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEIT- 970
P DD R H+ S +V ++ ++ S T L D N + + + I+
Sbjct: 876 PVDDDERKASGKDHM---GALESPKVITLQSSCKSSGTDGTL-DGNDAFGLYSMGSHISG 931
Query: 971 -PEILLPISETPKIPTETIRKAATLLKLSIVK 1001
PE +L + KIP E+ R+ T+LK + K
Sbjct: 932 IPEDMLASQDWGKIPDESQRRLHTVLKPKMAK 963
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.9 bits (64), Expect = 9.8
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 856 KILGNNKSGGKFKHKMADRKKTAAKNFGGKI---KMQENKFAGKGKRKGGTANGPENLDL 912
K+LG K+ R + + F G K + A K K+ P D
Sbjct: 816 KLLGGKNPMWKYPSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPRVTDP 875
Query: 913 P-DDTFRMGLDNFHLIGENVTVSERVTSVDTARSSVDTPSVLPDFNIPTPMNTPVNEIT- 970
P DD R H+ S +V ++ ++ S T L D N + + + I+
Sbjct: 876 PVDDDERKASGKDHM---GALESPKVITLQSSCKSSGTDGTL-DGNDAFGLYSMGSHISG 931
Query: 971 -PEILLPISETPKIPTETIRKAATLLKLSIVK 1001
PE +L + KIP E+ R+ T+LK + K
Sbjct: 932 IPEDMLASQDWGKIPDESQRRLHTVLKPKMAK 963
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,360,549
Number of Sequences: 28952
Number of extensions: 969463
Number of successful extensions: 2196
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2171
Number of HSP's gapped (non-prelim): 36
length of query: 1096
length of database: 12,070,560
effective HSP length: 89
effective length of query: 1007
effective length of database: 9,493,832
effective search space: 9560288824
effective search space used: 9560288824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 64 (29.9 bits)
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