Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000138-TA|BGIBMGA000138-PA|IPR002773|Deoxyhypusine
synthase
(371 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05920.1 68418.m00654 deoxyhypusine synthase almost identical... 420 e-118
At5g44930.2 68418.m05510 exostosin family protein contains Pfam ... 34 0.13
At5g44930.1 68418.m05509 exostosin family protein contains Pfam ... 34 0.13
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 30 2.2
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 30 2.2
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 29 3.8
At3g12540.1 68416.m01560 expressed protein contains Pfam profile... 29 3.8
At3g24440.1 68416.m03067 fibronectin type III domain-containing ... 29 5.0
At3g16540.1 68416.m02112 DegP protease, putative contains simila... 29 5.0
At4g01800.1 68417.m00237 preprotein translocase secA subunit, pu... 29 6.6
At1g58410.1 68414.m06645 disease resistance protein (CC-NBS-LRR ... 29 6.6
At1g52100.1 68414.m05879 jacalin lectin family protein similar t... 29 6.6
>At5g05920.1 68418.m00654 deoxyhypusine synthase almost identical to
deoxyhypusine synthase GI:15431345 from [Arabidopsis
thaliana]
Length = 368
Score = 420 bits (1035), Expect = e-118
Identities = 191/346 (55%), Positives = 248/346 (71%), Gaps = 4/346 (1%)
Query: 20 NAVLQPSQDLPAETPIVAGYDWENGTDYNKILESYANSGFQATNFGKTVVEINNMLKSRA 79
+ V + S+ L + + GYD+ G DY K++ S +GFQA+N G+ + +N ML R
Sbjct: 12 STVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAIDVVNQMLDWRL 71
Query: 80 VPLTEENSDCYEEDQ--FIKKKTNCTIFLGYTSNMISSGLRDTIRFLVKNKLVDVIVTTA 137
T DC EE++ ++ C IFLG+TSN++SSG+RDTIR+LV++ +VDVIVTT
Sbjct: 72 ADETTVAEDCSEEEKNPSFRESVKCKIFLGFTSNLVSSGVRDTIRYLVQHHMVDVIVTTT 131
Query: 138 GGIEEDLIKCIAPTYVGDFNLSGKVLRTRGINRIGNLLVPNDNYCLFEEWVTPLLDEMIS 197
GG+EEDLIKC+APT+ GDF+L G LR++G+NRIGNLLVPNDNYC FE+W+ P+ DEM+
Sbjct: 132 GGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDEMLK 191
Query: 198 EQMKEGTVWSPSRITARLGERINNESSVCYWAWRNNIPIFSPALTDGSLGDMMYFHSFKR 257
EQ +E +W+PS++ ARLG+ INNESS YWA++ NIP+F P LTDGSLGDM+YFHSF+
Sbjct: 192 EQKEENVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCPGLTDGSLGDMLYFHSFRT 251
Query: 258 PXXXXXXXXXXXXXNTMAVKAN--NTGVXXXXXXXXKHHICNANLMRNGADYAVYVNTAS 315
N AV AN TG+ KHHICNAN+MRNGADYAV++NT
Sbjct: 252 SGLIIDVVQDIRAMNGEAVHANPKKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQ 311
Query: 316 EFDGSDAGARPDEAVSWGKIRPNANPVKLYADATLVFPLIVAQTFA 361
EFDGSD+GARPDEAVSWGKIR +A VK+Y DAT+ FPL+VA+TFA
Sbjct: 312 EFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFA 357
>At5g44930.2 68418.m05510 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 443
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 49 KILESYANSGFQATNFGKTVVEINNMLKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGY 108
++++ N+ T+F + + +++K +P + D YE + +K++TN F+G
Sbjct: 196 RVMDRVKNAVLLVTDFDRLRADQGSLVKDVIIPYSHR-IDAYEGELGVKQRTNLLFFMGN 254
Query: 109 TSNMISSGLRDTIRFLVKNKLVDVIV 134
+RD + F + K DV++
Sbjct: 255 RYRKDGGKVRDLL-FKLLEKEEDVVI 279
>At5g44930.1 68418.m05509 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 443
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 49 KILESYANSGFQATNFGKTVVEINNMLKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGY 108
++++ N+ T+F + + +++K +P + D YE + +K++TN F+G
Sbjct: 196 RVMDRVKNAVLLVTDFDRLRADQGSLVKDVIIPYSHR-IDAYEGELGVKQRTNLLFFMGN 254
Query: 109 TSNMISSGLRDTIRFLVKNKLVDVIV 134
+RD + F + K DV++
Sbjct: 255 RYRKDGGKVRDLL-FKLLEKEEDVVI 279
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 26 SQDLPAETPIVAGYDWENGTDYN---KILESYANSGFQATNF 64
+Q L A+ G W++G+DY+ KI SY G Q F
Sbjct: 252 AQKLEAQGNSTGGTSWDDGSDYDGVTKIYASYGGEGIQYVKF 293
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 26 SQDLPAETPIVAGYDWENGTDYN---KILESYANSGFQATNF 64
+Q L A+ G W++G+DY+ KI SY G Q F
Sbjct: 252 AQKLEAQGNSTGGTSWDDGSDYDGVTKIYASYGGEGIQYVKF 293
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 106 LGYTSNMISSGLRDTIRFLVKNKLVDVIVTTAGGIEEDLIKCIAP 150
LG+ S ++ S R+ FL+ NK D VT+ G +D C P
Sbjct: 21 LGFLSTVVISQYREVEEFLINNK--DNCVTSLGSYPDDSSTCHDP 63
>At3g12540.1 68416.m01560 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 503
Score = 29.5 bits (63), Expect = 3.8
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 72 NNMLKSRAVPLTEEN-SDCYEEDQFIKK------KTNCTI--FLGYTSNMISSGLRDTI- 121
N+++K R+ L + + S Y + +K +T+ +I + ++S + SS D +
Sbjct: 107 NDLIKMRSEDLKQRSKSQSYGDHHVVKDIQMNSPRTHASIGSTMEFSSRIHSSTFSDGMS 166
Query: 122 RFLVKNKLVDVIVTTAGGIEEDLIKCIAPTYVGDFNLSGK 161
R KN + + TT G+ EDL+KC+ Y+ + N S +
Sbjct: 167 RTQEKNNVQE---TTPNGVSEDLVKCLMGIYL-ELNRSSR 202
>At3g24440.1 68416.m03067 fibronectin type III domain-containing
protein contains Pfam profile PF00041: Fibronectin type
III domain
Length = 602
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 304 GADYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNANPVKLYADAT 349
G D V +N+ +E DG D D+AVS G+ R N N + +D +
Sbjct: 442 GEDNGVPLNSLAEADGGDHDDNCDDAVSNGR-RKNNNDCLVISDGS 486
>At3g16540.1 68416.m02112 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 555
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 45 TDYNKILESYANSGFQATNFGKTVVEINNMLKSRAVPLTEENSDCYEEDQFIKKKTNCTI 104
+++++ L N G+Q+ +G V ++N + L E +C ED ++ K + +
Sbjct: 439 SEHHQRLADDINEGYQSL-YGAQVEKVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVL 497
Query: 105 FLGYTSNMISSGLRDTIRFLVKNKLVDVI 133
L Y S + T++ L ++K+ VI
Sbjct: 498 VLNY-----ESAKKATLQILERHKIKSVI 521
>At4g01800.1 68417.m00237 preprotein translocase secA subunit,
putative similar to preprotein translocase secA subunit,
chloroplast [precursor] SP:Q9SYI0 from [Arabidopsis
thaliana]; non-consensus GA donor splice site at exon 4
Length = 1022
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 151 TYVGDFNLSGKVLRTRGINRIGNLLVPNDNYCLFEEWVTPLLDEMISEQMKEGTVWSPS 209
TYV + L LR + L++ + NYC+ +E + L+DE + + G PS
Sbjct: 249 TYVTNSELGFDYLRDNLATSVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPS 307
>At1g58410.1 68414.m06645 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 899
Score = 28.7 bits (61), Expect = 6.6
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 66 KTVVEINNMLKSRAVPLTEENSDCYEEDQ-FIKKKTNCTIFLGYTSNMISSGLRDTIRFL 124
KT +E++N+ K A+ S E+ + ++ +T I TS S +R L
Sbjct: 663 KTKLELSNLEKLEALENFSTKSSSLEDLRGMVRLRTLVIILSEGTSLQTLSASVCGLRHL 722
Query: 125 VKNKLVDVIVTTAGGIEEDLIKCIAPTYVGDFNLSGKVLRTRGINRI-GNLLVPNDNYCL 183
K+++ G EE ++ + TY+ LS ++ R I + +L V + +YC
Sbjct: 723 ENFKIMENAGVNRMG-EERMV--LDFTYLKKLTLSIEMPRLPKIQHLPSHLTVLDLSYCC 779
Query: 184 FEEWVTPLLDEMI 196
EE P+L++++
Sbjct: 780 LEEDPMPILEKLL 792
>At1g52100.1 68414.m05879 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain; contains non-consensus AG
donor splice site at exon3
Length = 381
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 38 GYDWENGTDYNKILESYANSGFQATNFGK 66
G W++G+DY+ + + Y G + F K
Sbjct: 13 GIQWDDGSDYHDVTKIYVRGGLEGIQFIK 41
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,659,346
Number of Sequences: 28952
Number of extensions: 355764
Number of successful extensions: 665
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 658
Number of HSP's gapped (non-prelim): 12
length of query: 371
length of database: 12,070,560
effective HSP length: 82
effective length of query: 289
effective length of database: 9,696,496
effective search space: 2802287344
effective search space used: 2802287344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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