GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000138-TA|BGIBMGA000138-PA|IPR002773|Deoxyhypusine
synthase
         (371 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010229-1|AAQ23547.1|  368|Drosophila melanogaster RE64695p pro...   495   e-140
AE014296-1396|AAF50467.2|  368|Drosophila melanogaster CG8005-PA...   495   e-140
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    30   4.5  
BT023153-1|AAY55569.1|  520|Drosophila melanogaster IP03480p pro...    29   7.8  
BT023136-1|AAY55552.1|  519|Drosophila melanogaster IP03580p pro...    29   7.8  
AE014297-1152|AAN13471.2|  500|Drosophila melanogaster CG14680-P...    29   7.8  
AE014297-1151|AAF54532.3|  514|Drosophila melanogaster CG14680-P...    29   7.8  

>BT010229-1|AAQ23547.1|  368|Drosophila melanogaster RE64695p
           protein.
          Length = 368

 Score =  495 bits (1220), Expect = e-140
 Identities = 222/357 (62%), Positives = 278/357 (77%)

Query: 15  PNIAVNAVLQPSQDLPAETPIVAGYDWENGTDYNKILESYANSGFQATNFGKTVVEINNM 74
           P++A +AVL+ S+ L   TP V+GYD+  G DY+K+ ESY N+GFQATN G  + EIN M
Sbjct: 5   PSVAKDAVLKRSEALAENTPQVSGYDFNEGLDYSKLFESYVNTGFQATNLGLAIREINRM 64

Query: 75  LKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSNMISSGLRDTIRFLVKNKLVDVIV 134
           L  R  PL  +  D +E D FI++++ CT+FLGYTSN++SSGLR+TIRFL +++++D IV
Sbjct: 65  LDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTSNLVSSGLRETIRFLAEHRMIDCIV 124

Query: 135 TTAGGIEEDLIKCIAPTYVGDFNLSGKVLRTRGINRIGNLLVPNDNYCLFEEWVTPLLDE 194
           TTAGG+EED IKC+APT++G F LSG+ LR RGINRIGNLLVPNDNYC FE+WV PLLDE
Sbjct: 125 TTAGGVEEDFIKCLAPTFMGSFELSGRDLRERGINRIGNLLVPNDNYCKFEDWVMPLLDE 184

Query: 195 MISEQMKEGTVWSPSRITARLGERINNESSVCYWAWRNNIPIFSPALTDGSLGDMMYFHS 254
           M+ EQ  +GT+WSPS+I  RLGERI + SS+ YWA +N IP+F PALTDGSLGDMMYFHS
Sbjct: 185 MLEEQKSQGTIWSPSKIIHRLGERIGDPSSIYYWAAKNQIPVFCPALTDGSLGDMMYFHS 244

Query: 255 FKRPXXXXXXXXXXXXXNTMAVKANNTGVXXXXXXXXKHHICNANLMRNGADYAVYVNTA 314
           F++P             NTMAVKA N+G+        KHHICNANLMRNGADY+V++NTA
Sbjct: 245 FRQPGLVVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHHICNANLMRNGADYSVFINTA 304

Query: 315 SEFDGSDAGARPDEAVSWGKIRPNANPVKLYADATLVFPLIVAQTFAKHHFSSKKNV 371
           SEFDGSD+GARPDEA+SWGKIR +A PVK+YA+A+LVFPLIV +TFAK H  + K +
Sbjct: 305 SEFDGSDSGARPDEAISWGKIRKDATPVKVYAEASLVFPLIVGETFAKRHHCAGKEL 361


>AE014296-1396|AAF50467.2|  368|Drosophila melanogaster CG8005-PA
           protein.
          Length = 368

 Score =  495 bits (1220), Expect = e-140
 Identities = 222/357 (62%), Positives = 278/357 (77%)

Query: 15  PNIAVNAVLQPSQDLPAETPIVAGYDWENGTDYNKILESYANSGFQATNFGKTVVEINNM 74
           P++A +AVL+ S+ L   TP V+GYD+  G DY+K+ ESY N+GFQATN G  + EIN M
Sbjct: 5   PSVAKDAVLKRSEALAENTPQVSGYDFNEGLDYSKLFESYVNTGFQATNLGLAIREINRM 64

Query: 75  LKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSNMISSGLRDTIRFLVKNKLVDVIV 134
           L  R  PL  +  D +E D FI++++ CT+FLGYTSN++SSGLR+TIRFL +++++D IV
Sbjct: 65  LDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTSNLVSSGLRETIRFLAEHRMIDCIV 124

Query: 135 TTAGGIEEDLIKCIAPTYVGDFNLSGKVLRTRGINRIGNLLVPNDNYCLFEEWVTPLLDE 194
           TTAGG+EED IKC+APT++G F LSG+ LR RGINRIGNLLVPNDNYC FE+WV PLLDE
Sbjct: 125 TTAGGVEEDFIKCLAPTFMGSFELSGRDLRERGINRIGNLLVPNDNYCKFEDWVMPLLDE 184

Query: 195 MISEQMKEGTVWSPSRITARLGERINNESSVCYWAWRNNIPIFSPALTDGSLGDMMYFHS 254
           M+ EQ  +GT+WSPS+I  RLGERI + SS+ YWA +N IP+F PALTDGSLGDMMYFHS
Sbjct: 185 MLEEQKSQGTIWSPSKIIHRLGERIGDPSSIYYWAAKNQIPVFCPALTDGSLGDMMYFHS 244

Query: 255 FKRPXXXXXXXXXXXXXNTMAVKANNTGVXXXXXXXXKHHICNANLMRNGADYAVYVNTA 314
           F++P             NTMAVKA N+G+        KHHICNANLMRNGADY+V++NTA
Sbjct: 245 FRQPGLVVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHHICNANLMRNGADYSVFINTA 304

Query: 315 SEFDGSDAGARPDEAVSWGKIRPNANPVKLYADATLVFPLIVAQTFAKHHFSSKKNV 371
           SEFDGSD+GARPDEA+SWGKIR +A PVK+YA+A+LVFPLIV +TFAK H  + K +
Sbjct: 305 SEFDGSDSGARPDEAISWGKIRKDATPVKVYAEASLVFPLIVGETFAKRHHCAGKEL 361


>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
           protein.
          Length = 2112

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 56  NSGFQATNFGKTVVEINNMLKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSN 111
           N G    N G +V+  ++    RAV   EE+     +D F+   ++CT+F    SN
Sbjct: 119 NYGLAGLN-GVSVISFSSSSSLRAVGSAEEDGIICRDDGFMTDPSDCTVFYRCISN 173


>BT023153-1|AAY55569.1|  520|Drosophila melanogaster IP03480p
           protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 306 DYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNANPVKL 344
           DY   V+    FDG D G       +WGK+R   NP+ L
Sbjct: 116 DYFKRVHRREVFDGYD-GLTSGNGPAWGKMRTAVNPILL 153


>BT023136-1|AAY55552.1|  519|Drosophila melanogaster IP03580p
           protein.
          Length = 519

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 306 DYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNANPVKL 344
           DY   V+    FDG D G       +WGK+R   NP+ L
Sbjct: 115 DYFKRVHRREVFDGYD-GLTSGNGPAWGKMRTAVNPILL 152


>AE014297-1152|AAN13471.2|  500|Drosophila melanogaster CG14680-PB,
           isoform B protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 306 DYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNANPVKL 344
           DY   V+    FDG D G       +WGK+R   NP+ L
Sbjct: 110 DYFKRVHRREVFDGYD-GLTSGNGPAWGKMRTAVNPILL 147


>AE014297-1151|AAF54532.3|  514|Drosophila melanogaster CG14680-PA,
           isoform A protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 306 DYAVYVNTASEFDGSDAGARPDEAVSWGKIRPNANPVKL 344
           DY   V+    FDG D G       +WGK+R   NP+ L
Sbjct: 110 DYFKRVHRREVFDGYD-GLTSGNGPAWGKMRTAVNPILL 147


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.133    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,606,292
Number of Sequences: 52641
Number of extensions: 718529
Number of successful extensions: 1706
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1703
Number of HSP's gapped (non-prelim): 8
length of query: 371
length of database: 24,830,863
effective HSP length: 86
effective length of query: 285
effective length of database: 20,303,737
effective search space: 5786565045
effective search space used: 5786565045
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)