BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000137-TA|BGIBMGA000137-PA|IPR001772|Kinase-associated,
C-terminal
(313 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 159 2e-39
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 157 1e-38
AL117207-10|CAB60401.1| 235|Caenorhabditis elegans Hypothetical... 113 2e-25
Z83105-12|CAB05490.2| 142|Caenorhabditis elegans Hypothetical p... 110 1e-24
AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical ... 32 0.61
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 958 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1017
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1018 SLVQWEMEVCKLPRLSLNGVRFKRISG 1044
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 992 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1051
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1052 SLVQWEMEVCKLPRLSLNGVRFKRISG 1078
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 1088 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1147
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1148 SLVQWEMEVCKLPRLSLNGVRFKRISG 1174
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 958 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1017
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1018 SLVQWEMEVCKLPRLSLNGVRFKRISG 1044
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 992 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1051
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1052 SLVQWEMEVCKLPRLSLNGVRFKRISG 1078
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 1088 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1147
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1148 SLVQWEMEVCKLPRLSLNGVRFKRISG 1174
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 159 bits (386), Expect = 2e-39
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCVHGDPN D
Sbjct: 992 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTD 1051
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1052 SLVQWEMEVCKLPRLSLNGVRFKRISG 1078
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 157 bits (380), Expect = 1e-38
Identities = 70/87 (80%), Positives = 79/87 (90%)
Query: 66 NEEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNAD 125
+E VKPR LRFTWSMKTTSS P+++M EIRKVLDAN CDYEQRER+++LCV+GDPN D
Sbjct: 1088 HEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVYGDPNTD 1147
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
SLVQWE+EVCKLPRLSLNGVRFKRISG
Sbjct: 1148 SLVQWEMEVCKLPRLSLNGVRFKRISG 1174
>AL117207-10|CAB60401.1| 235|Caenorhabditis elegans Hypothetical
protein Y60A3A.16 protein.
Length = 235
Score = 113 bits (271), Expect = 2e-25
Identities = 50/88 (56%), Positives = 67/88 (76%)
Query: 67 EEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNADS 126
+++ PR +RFTW++K TS +P+EI+ EI+KVL + DYEQ++RFLL C H DP D+
Sbjct: 39 DQEDMPRAVRFTWNLKKTSMLEPDEILKEIQKVLGSYGIDYEQQKRFLLRCSHVDPLTDA 98
Query: 127 LVQWEIEVCKLPRLSLNGVRFKRISGQN 154
V+WEIEVC LPRL LNGV F+RISG +
Sbjct: 99 SVKWEIEVCTLPRLYLNGVHFQRISGSS 126
>Z83105-12|CAB05490.2| 142|Caenorhabditis elegans Hypothetical
protein F14H3.12 protein.
Length = 142
Score = 110 bits (265), Expect = 1e-24
Identities = 48/88 (54%), Positives = 68/88 (77%)
Query: 67 EEQVKPRVLRFTWSMKTTSSRDPNEIMAEIRKVLDANNCDYEQRERFLLLCVHGDPNADS 126
+++ + R +RFTWS+K TS +P+EI+ EI+KVL++ DYEQ++R+LL C H DP D+
Sbjct: 39 DQEDQARAVRFTWSLKKTSMLEPDEILKEIQKVLESYGIDYEQQKRYLLRCSHVDPLTDA 98
Query: 127 LVQWEIEVCKLPRLSLNGVRFKRISGQN 154
V+W+IEVC LPRL LNGV F+RISG +
Sbjct: 99 SVKWDIEVCTLPRLYLNGVHFQRISGSS 126
>AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical
protein W03G1.6a protein.
Length = 726
Score = 31.9 bits (69), Expect = 0.61
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 72 PRVLRFTWSM---KTTSSRDPNEIMAEIRKVLDANNCDYEQRE-RFLLL--CVHGDPNAD 125
P+VL+ +M T+S+DP E+ ++KV D YE +FL VHG
Sbjct: 627 PQVLKDVKNMVNVSMTASQDPEEVRNLLKKVFDDERMRYELNGWKFLATQETVHG----- 681
Query: 126 SLVQWEIEVCKLPRLSLNGVRFKRISG 152
+ E+E+ +L G+R KR+ G
Sbjct: 682 -WMTVELEIVRLQMFDKVGIRRKRLKG 707
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,069,911
Number of Sequences: 27539
Number of extensions: 214303
Number of successful extensions: 547
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 11
length of query: 313
length of database: 12,573,161
effective HSP length: 81
effective length of query: 232
effective length of database: 10,342,502
effective search space: 2399460464
effective search space used: 2399460464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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