Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000135-TA|BGIBMGA000135-PA|undefined
(189 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 30 1.2
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 30 1.2
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 30 1.2
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 29 2.8
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 3.6
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 28 4.8
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 28 4.8
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 28 4.8
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 27 6.4
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 27 6.4
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 6.4
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 13 KSFRAPRVSPAPDSQESALNGAP---PPSPVSLAMLERT 48
+ FRAP + PAP S + GAP P+P+ L+ T
Sbjct: 861 RGFRAPSLPPAPQSTHNRRGGAPIDEVPAPIILSPQNNT 899
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 2 ERKLTREDFMR--KSFRAPRVSPAPDSQE-SALNGAPPPSPVSLAMLERTAQPQRTQYEV 58
E L RE+ K R+ V PAP S APP P S+ T+ ++ E
Sbjct: 65 EDSLKREEASEPLKDVRSSPVRPAPPPPRVSQEREAPPIPPRSMIFPRSTSMVAESRKES 124
Query: 59 TSTGIAPKRLEISRAHP 75
T T +APKR ++P
Sbjct: 125 T-TAVAPKRSVAVASYP 140
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 12 RKSFRAPRVSPAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAPKRLEIS 71
R+ FR P + P +QE A A +P S+ E ++T+ E I P R+ I+
Sbjct: 523 RQKFRQPIRTAYPKAQEQA--PAAAAAPTSIEQSEPAGTSRQTETETEDLSIPPPRIYIT 580
Query: 72 R 72
+
Sbjct: 581 Q 581
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 122 VTVDERVRYAEHENLLRTGVSSVGGGGYLPADSDTEHDGAPFSRNETTRSS 172
V VD+ Y E E + + VGGGGY A DT+ + N RSS
Sbjct: 87 VVVDDESIYDEVEPRMMGSKTGVGGGGYY-AVHDTKSSSNTLNNNIPRRSS 136
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 48 TAQPQRTQYEVTSTGIAPKRLEISRAHPIHLKSFQAXXXXXXXXXXXXXXXVLRKLER-- 105
T +++ +E T + + E+ +AH LKS A V L
Sbjct: 392 TIAAKQSTFESEKTQLLKELDEVKKAHANQLKSI-ALIKKELEDHKAAAPSVKPTLSESE 450
Query: 106 QIGEMERGLERAQNGNVTVDERVRYAEHE 134
Q+ +++ E+A+ NV+++E +R A E
Sbjct: 451 QVDALQQKFEKAEAANVSINEELRSASKE 479
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 48 TAQPQRTQYEVTSTGIAPKRLEISRAHPIHLKSFQAXXXXXXXXXXXXXXXVLRKLER-- 105
T +++ +E T + + E+ +AH LKS A V L
Sbjct: 58 TIAAKQSTFESEKTQLLKELDEVKKAHANQLKSI-ALIKKELEDHKAAAPSVKPTLSESE 116
Query: 106 QIGEMERGLERAQNGNVTVDERVRYAEHE 134
Q+ +++ E+A+ NV+++E +R A E
Sbjct: 117 QVDALQQKFEKAEAANVSINEELRSASKE 145
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 48 TAQPQRTQYEVTSTGIAPKRLEISRAHPIHLKSFQAXXXXXXXXXXXXXXXVLRKLER-- 105
T +++ +E T + + E+ +AH LKS A V L
Sbjct: 392 TIAAKQSTFESEKTQLLKELDEVKKAHANQLKSI-ALIKKELEDHKAAAPSVKPTLSESE 450
Query: 106 QIGEMERGLERAQNGNVTVDERVRYAEHE 134
Q+ +++ E+A+ NV+++E +R A E
Sbjct: 451 QVDALQQKFEKAEAANVSINEELRSASKE 479
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 14 SFRAPRVSPAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
S+RAP+ + + S S P+P + A P RT Y ST AP
Sbjct: 265 SYRAPKTTTSSSSYGSIAEAPVDPTPYAPASAP-VYSPPRTTYVPRSTSAAP 315
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 141 VSSVGGGGYLPADSDTEHDGAPFS---RNETTRSSKNQLK 177
VS G G PADS TE +GAP + +TT +KN+ +
Sbjct: 344 VSDASGEG--PADSATEGEGAPAGGAPKGDTTYPTKNRAR 381
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 127 RVRYAEHENLLRTGVSSVGGGGYLPADSDTEH 158
RV +HE+L+ G GGGG++ D T H
Sbjct: 123 RVPMGKHEDLVENGD---GGGGFVAGDEGTRH 151
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 127 RVRYAEHENLLRTGVSSVGGGGYLPADSDTEH 158
RV +HE+L+ G GGGG++ D T H
Sbjct: 174 RVPMGKHEDLVENGD---GGGGFVAGDEGTRH 202
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2217 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2259
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2008 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2050
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2315 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2357
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2217 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2259
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2008 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2050
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2315 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2357
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 2026 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2068
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 3 RKLTREDFMRK-SFRAPRVSPAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTST 61
R+ +ED MR+ + A S +A PPP P + ++ E P RTQ + +T
Sbjct: 704 RQTEKEDLMRQLQLSIVSGTNAAQSPANAPPRPPPPRPAAPSV-ESPIPPPRTQQSMQAT 762
Query: 62 GIAP 65
AP
Sbjct: 763 PGAP 766
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 27.5 bits (58), Expect = 6.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 3 RKLTREDFMRK-SFRAPRVSPAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTST 61
R+ +ED MR+ + A S +A PPP P + ++ E P RTQ + +T
Sbjct: 704 RQTEKEDLMRQLQLSIVSGTNAAQSPANAPPRPPPPRPAAPSV-ESPIPPPRTQQSMQAT 762
Query: 62 GIAP 65
AP
Sbjct: 763 PGAP 766
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 22 PAPDSQESALNGAPPPSPVSLAMLERTAQPQRTQYEVTSTGIAP 65
P P S N PPP+P ++ T+ P+ + + G++P
Sbjct: 1990 PGPTSAREERNDVPPPAPPMRPIITHTS-PEGCETQQEPAGLSP 2032
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.130 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,281,240
Number of Sequences: 27539
Number of extensions: 167616
Number of successful extensions: 614
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 608
Number of HSP's gapped (non-prelim): 25
length of query: 189
length of database: 12,573,161
effective HSP length: 77
effective length of query: 112
effective length of database: 10,452,658
effective search space: 1170697696
effective search space used: 1170697696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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