GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000135-TA|BGIBMGA000135-PA|undefined
         (189 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)

Query: 115 ERAQNGNVTVDERVRYAEHENL--LRTGVSSVGGGGYLPADSDTEHDG 160
           +R  NGN+  +E  ++AE+E+L  L  G +     G++ +  DT+ DG
Sbjct: 246 DRNNNGNLEREELEQFAENEDLEELCRGCNL----GHMISYDDTDGDG 289


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 128 VRYAEHENLLRTGVSSVGGGGYLPADSDTEHDGAPFSRNETT 169
           V++ E + +   G+     GG + +      D +PF R   T
Sbjct: 957 VKFQEGQTVSGGGMGGCQPGGVVQSQQPIMTDPSPFKRGRYT 998


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,450
Number of Sequences: 429
Number of extensions: 1832
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 189
length of database: 140,377
effective HSP length: 54
effective length of query: 135
effective length of database: 117,211
effective search space: 15823485
effective search space used: 15823485
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)