Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000134-TA|BGIBMGA000134-PA|undefined
(165 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0355 + 3912019-3913046,3914354-3914678 32 0.20
08_02_0197 - 14150787-14151440 31 0.46
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 30 0.81
10_08_1022 + 22337332-22339398 30 1.1
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 30 1.1
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 2.5
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 28 3.3
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 28 4.3
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 28 4.3
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 5.7
12_01_0779 + 7129879-7130398,7130585-7130664 27 5.7
08_01_0118 + 947394-947885,948709-948810,948914-949219,949557-94... 27 5.7
02_04_0452 + 23044190-23045227 27 5.7
02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952 27 5.7
05_07_0122 + 27843139-27843792 27 7.5
05_01_0069 - 477394-477656,477921-478041 27 7.5
04_04_1668 + 35217254-35218531 27 7.5
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 27 7.5
03_05_1142 - 30703333-30703469,30704058-30704205,30704893-307049... 27 7.5
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 27 7.5
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 27 7.5
01_06_1043 + 34078015-34079541 27 7.5
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 27 7.5
12_01_0904 + 8791474-8792261,8792935-8793037,8794009-8794055,879... 27 10.0
11_02_0037 - 7613632-7613727,7614452-7615507 27 10.0
10_06_0036 - 9914606-9915561,9916287-9916368 27 10.0
08_02_0233 + 14593639-14594468,14594480-14594986,14595362-145958... 27 10.0
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 27 10.0
07_01_0303 - 2171796-2172611,2173133-2174062,2174659-2175132,217... 27 10.0
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 27 10.0
02_01_0035 - 220036-221419,222050-222801 27 10.0
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840... 27 10.0
01_01_0052 - 391398-391691,392243-392647 27 10.0
>10_01_0355 + 3912019-3913046,3914354-3914678
Length = 450
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 100 PVTDEQXXXXXXXXXXXSADKRVMVTIVDGLPVVVTGQNQIPQPPPPVTHHRHAHRDKS 158
PV D + R +TI D + V G + P PPPPVT HR A + S
Sbjct: 169 PVVDLVAENMYHAGKVFVCNDRGHLTIFDAATLAVLG-DAAPPPPPPVTLHRDAFKCSS 226
>08_02_0197 - 14150787-14151440
Length = 217
Score = 31.1 bits (67), Expect = 0.46
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 133 VVTGQNQIPQPPPPVTHHRHAHR 155
++ +N PPPP HH HAH+
Sbjct: 16 MMLSKNPRTPPPPPAMHHHHAHK 38
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 130 LPVVVTGQNQIPQPPPPVT----HHRHAHRDKSRRLNY 163
LPV T Q +P PPPP + HH + H+ + ++ Y
Sbjct: 986 LPVPPTPQQPLPPPPPPPSLQQLHHPYQHQQQQQQQLY 1023
>10_08_1022 + 22337332-22339398
Length = 688
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 130 LPVVVTGQNQIPQPPPPVTHHRHAHRDK 157
LP G P PPPP HH H + +
Sbjct: 10 LPAFPWGAASTPPPPPPPPHHHHQQQQQ 37
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 143 PPPPVTHHRHAHRDKSR 159
PPPP HH H HR + R
Sbjct: 36 PPPPPPHHHHHHRRRHR 52
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 141 PQPPPPVTHHRHAHRDK 157
P PPPP HH H R +
Sbjct: 36 PPPPPPHHHHHHRRRHR 52
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 136 GQNQIPQPPPPVTHHRHAHRDKSRR 160
G P PPPP HHR A + + R
Sbjct: 39 GAGPTPPPPPPPPHHRRARSEVAFR 63
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 12 VDAAYAVKSLSNVILPGMGHSVSVQRHHAHS---QSYKHKQELP-PPVSKPDAIKSHVMR 67
+D + K LSN L G VQ AHS + +E+ S+P+ +K R
Sbjct: 16 IDNGASRKLLSNESLEERGEEHDVQADGAHSGESEVINPAEEVGGEATSQPEDVKP---R 72
Query: 68 LLKRSKSHTPATRALENQPDPRNFER 93
+ K S+SH+P + PR+ ++
Sbjct: 73 VSKGSQSHSPKVTTKSQRQSPRSGDK 98
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 19 KSLSNVILPGMGHSVSVQRHHAHSQSYKHKQ--ELPPPVSKPDAIKSHVMRLLKRSKSHT 76
K V LP G+ Q H +Y + LPPP P S +L H+
Sbjct: 733 KQAGAVHLPNYGNLAGAQEHPTQHSAYNPEMTLNLPPPPPPPTLPPSSA--ILSSQVGHS 790
Query: 77 PATRALENQPDPRNF 91
T+ + Q P +
Sbjct: 791 LPTQMSQQQYQPEQY 805
>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
Length = 356
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 117 SADKRVMVTIVDGLPVVVTGQNQIPQPPPPVTHHRHAHR 155
S++KRV T+ DG GQ I P P +++R H+
Sbjct: 123 SSNKRVAATLEDGHVWRKYGQKDIQNSPYPRSYYRCTHK 161
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 136 GQNQIPQPPPPVTHHR 151
G + QPPPPV++HR
Sbjct: 65 GASSFDQPPPPVSYHR 80
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 41 HSQSYKHKQELPPPVSKP 58
H QSY H PPPV+ P
Sbjct: 286 HPQSYMHPPPPPPPVTMP 303
>12_01_0779 + 7129879-7130398,7130585-7130664
Length = 199
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 143 PPPPVTHHRHAHRDKSRRLNYLE 165
PPPP HRH HR +RR + +E
Sbjct: 21 PPPPRRRHRH-HRRAARRTHPVE 42
>08_01_0118 +
947394-947885,948709-948810,948914-949219,949557-949616
Length = 319
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 141 PQPPPPVTHHRHAHRDK 157
P PPPP+ H H HR +
Sbjct: 29 PSPPPPLHLHLHLHRHR 45
>02_04_0452 + 23044190-23045227
Length = 345
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 24 VILPGMGHSVSVQRHHAHSQSYKHKQELPPPVSKP 58
++L GH H+HS S H PP S P
Sbjct: 169 LLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAP 203
>02_04_0285 - 21585048-21585173,21585302-21585355,21585512-21585952
Length = 206
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 141 PQPPPPVTHHRHAHRDKS 158
P+PPPP+ HRH S
Sbjct: 29 PRPPPPLRRHRHLSSSSS 46
>05_07_0122 + 27843139-27843792
Length = 217
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 46 KHKQELPPPVSKPDAIKSHVMRLLKRSKSHTPATR 80
K K +PP ++ A++ +VMRL KS ATR
Sbjct: 70 KIKPPIPPLAARRRALEGNVMRLQAIPKSEPDATR 104
>05_01_0069 - 477394-477656,477921-478041
Length = 127
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 52 PPPVSKPDAIKSHVMRLLKRSKSHTPATRALENQPDP 88
PPP A+ +H+ L+ H P L +P P
Sbjct: 44 PPPTIHGAAVNTHLQLHLRGRPMHPPPAPQLRREPSP 80
>04_04_1668 + 35217254-35218531
Length = 425
Score = 27.1 bits (57), Expect = 7.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 143 PPPPVTHHRHAH 154
PPPP HH H+H
Sbjct: 29 PPPPPDHHSHSH 40
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 36 QRHHAHSQSYKHKQELPPPVSKP 58
+RHH H K K++ PPP P
Sbjct: 28 RRHHHHHNHTKRKKKPPPPPLSP 50
>03_05_1142 -
30703333-30703469,30704058-30704205,30704893-30704963,
30705189-30705285,30705371-30705562,30705639-30705977
Length = 327
Score = 27.1 bits (57), Expect = 7.5
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 3 EVSCVAGNKVDAAYAVKSLSNVILPGMGHSVSVQRHHAHSQSYKHKQELPPP-VSKPDAI 61
++ +A K AA K N ++ MG S ++++ + LPPP V PDA
Sbjct: 20 DLDAIAAIKESAAAEYKEKGNRLVK-MGRSHYADAVDCYTKAIAQMEPLPPPPVPSPDAS 78
Query: 62 -----KSHVMRLL-KRSKSHTPATRALENQP 86
++HV LL ++ A RA++ P
Sbjct: 79 VLFANRAHVNLLLGNHRRALDDAARAVQLSP 109
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 27 PGMGHSVSVQRHHAHSQ--SYKHKQELPPPVSKPDAIKSH 64
PG S + H H Q + H+ PPP P++ SH
Sbjct: 13 PGHRRRGSAAQGHGHHQVHGHHHQPSSPPPPPPPESSPSH 52
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 50 ELPPPVSKPDAIKSHVMRLLKRSKSHTPATRALENQP 86
++PPP K + ++ +K H PA R LE P
Sbjct: 123 QIPPPRPKRKPAHPYPRKVDGAAKKHVPALRQLEKPP 159
>01_06_1043 + 34078015-34079541
Length = 508
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 39 HAHS-QSYKHKQELPPPVSKPDAIKSHVMRLLKRSKSHTPATRAL 82
HAH +SY LP D + ++KRS +HT + +AL
Sbjct: 34 HAHGLKSYPVVGTLPHFAKNKDRFLEFITEIMKRSPTHTLSFKAL 78
>01_01_0022 -
170045-170095,170406-170554,170764-170875,
171398-171469,171578-171671,171770-171921,172004-172072
Length = 232
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 45 YKHKQELPPPVSKPDAIKSHVMRLLKRSKSHTPATRALENQ 85
YK + P DAIK+ +RLLK + + L NQ
Sbjct: 45 YKEQIRKTRPGPSQDAIKARAIRLLKHKRMYEEQRNMLYNQ 85
>12_01_0904 +
8791474-8792261,8792935-8793037,8794009-8794055,
8795180-8795717
Length = 491
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 58 PDAIKSHVMRLLKRSKSHTPATRALENQPDPRNFERRTVFARPVTD 103
PD + S +RL + H+ A A N P P RR F +P D
Sbjct: 72 PDPLSSLHLRLFLPNPHHSAAPAAAANAPPPL---RRNSFPQPAHD 114
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 140 IPQPPPPVTHHRHAHRDKSRRLNYL 164
+P PPPP H H H LN +
Sbjct: 251 LPPPPPPPPHGHHHHHQIIMPLNMI 275
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 22 SNVILPGMGHSVSVQRHHAHSQSYKHKQELPPPVS 56
++++LP +G +VS Q H + + H Q+ P P +
Sbjct: 17 NSLLLPSLGLAVSGQEAHEVAMAGLHDQQPPSPAA 51
>08_02_0233 +
14593639-14594468,14594480-14594986,14595362-14595856,
14596592-14596662,14597116-14597199,14597328-14597446,
14598029-14598109,14598397-14598411
Length = 733
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 34 SVQRHHAHSQSYKHKQELPPPVSKPDAIKSHVMRLLKRSKSHT----PATRALEN 84
S Q H H+ K +Q P + DA K+ ++RL + T PA + ++N
Sbjct: 622 SSQYIHEHNALNKARQGFPVELGGVDASKTKILRLAHSTPQETWNLVPAAQGIQN 676
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 30 GHSVSVQRHHAHSQSY-KHKQEL 51
GH + HH+HS S+ KH EL
Sbjct: 40 GHHTTSNNHHSHSHSHRKHHAEL 62
>07_01_0303 -
2171796-2172611,2173133-2174062,2174659-2175132,
2175569-2175609,2176298-2176337
Length = 766
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 130 LPVVVTGQNQIPQPPPP 146
LPV+ GQ P PPPP
Sbjct: 560 LPVIPNGQPGAPAPPPP 576
>05_03_0468 +
14376926-14377183,14377534-14377710,14377802-14377867,
14378009-14378134,14378499-14378678,14379015-14379179,
14380185-14380538
Length = 441
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 139 QIPQPPPPVTHHRHAH 154
Q PQ PP + HH H H
Sbjct: 8 QPPQTPPSLDHHHHHH 23
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 30 GHSVSVQRHHAHSQSYKHKQELPPP 54
GH +Q H KH+Q+ PPP
Sbjct: 103 GHHPHLQLFHEQHHHQKHQQQPPPP 127
>01_01_1067 +
8403584-8404195,8404532-8404693,8404837-8405346,
8405434-8405493,8405721-8406137,8406576-8407100
Length = 761
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 141 PQPPPPVTHHRHAHRDKSR 159
PQPPPP RH + SR
Sbjct: 18 PQPPPPPVAQRHHQQQPSR 36
>01_01_0052 - 391398-391691,392243-392647
Length = 232
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 137 QNQIPQPPPPVTHHRHAHRDKSRRLNYL 164
Q+ IP PP P+ HH H H + + + L
Sbjct: 189 QSYIP-PPHPLHHHHHQHHNHHHQQSLL 215
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,353,564
Number of Sequences: 37544
Number of extensions: 209995
Number of successful extensions: 1234
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1183
Number of HSP's gapped (non-prelim): 51
length of query: 165
length of database: 14,793,348
effective HSP length: 77
effective length of query: 88
effective length of database: 11,902,460
effective search space: 1047416480
effective search space used: 1047416480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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