Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000133-TA|BGIBMGA000133-PA|IPR007087|Zinc finger,
C2H2-type
(225 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 48 5e-06
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 44 8e-05
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 43 1e-04
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 40 0.002
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 39 0.002
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 39 0.002
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 38 0.004
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 38 0.005
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 38 0.005
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 38 0.005
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 37 0.010
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 36 0.022
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 36 0.022
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 36 0.022
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 36 0.029
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 36 0.029
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 35 0.039
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 35 0.039
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 35 0.039
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 35 0.051
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 34 0.068
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 34 0.068
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 34 0.068
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 34 0.068
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 34 0.090
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 34 0.090
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 34 0.090
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 34 0.090
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 34 0.090
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 33 0.12
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 33 0.12
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 33 0.16
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 33 0.16
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 33 0.21
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 33 0.21
At2g40850.1 68415.m05043 phosphatidylinositol 3- and 4-kinase fa... 33 0.21
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 32 0.27
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 32 0.27
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 32 0.27
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 32 0.36
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 31 0.48
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 31 0.48
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 0.48
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 31 0.63
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 31 0.63
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 31 0.83
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 31 0.83
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 31 0.83
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 30 1.1
At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein ... 30 1.1
At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein ... 30 1.1
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 30 1.1
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 30 1.5
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 30 1.5
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 30 1.5
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 29 1.9
At5g37080.1 68418.m04451 hypothetical protein includes At5g37080... 29 2.5
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 29 2.5
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 29 2.5
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 29 2.5
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 29 2.5
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 29 2.5
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 29 3.4
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 29 3.4
At5g20670.1 68418.m02455 expressed protein 29 3.4
At3g29330.1 68416.m03683 expressed protein 29 3.4
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 28 4.4
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 28 4.4
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 28 4.4
At3g16730.1 68416.m02136 expressed protein ; expression supporte... 28 4.4
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 28 4.4
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 28 4.4
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 5.9
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 28 5.9
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 28 5.9
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 28 5.9
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 28 5.9
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 28 5.9
At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) conta... 27 7.8
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 27 7.8
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 27 7.8
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 27 7.8
At1g55545.1 68414.m06357 nucleoporin-related similar to nucleopo... 27 7.8
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 32 KKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCA 91
KK + + C YCG HI H + + +E R+ + ++S ++ +
Sbjct: 14 KKDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEE-RDDEACEVDEESSSNHT----- 67
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVC--DVCGRGFVSLNRRNQHRVCAHSAPSRRCP 149
C CG F L H + HS ER + C D C + + N+H + H +CP
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH-LLTHKGKLFKCP 126
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 6 QADAVHICEICGMIFQSEDELSEHCDKKHTKK-FTCYY--CGKMYKSESSFEIHINKHEE 62
++ + H C+ CG F+ L +H ++ FTCY C Y+ + H+ H+
Sbjct: 61 ESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG 120
Query: 63 KIVNKEPRNVK 73
K+ N K
Sbjct: 121 KLFKCPKENCK 131
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 44.0 bits (99), Expect = 8e-05
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 40 CYY--CGKMYKSESSFEIHI-NKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCG 96
CY C ++S++ + H N+ + K+ R K + D C+ C
Sbjct: 1217 CYLEGCKMTFESKAKLQTHKRNRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCS 1276
Query: 97 RSFVDQRTLMWHQRLHSNERPYVC--DVCGRGFVSLNRRNQHR 137
+F Q H RLH+ ERPY+C D CG F ++ ++HR
Sbjct: 1277 MTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHR 1319
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 21 QSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDK 80
+ E+ E KK K F C C K++KS + H H++KI E + K K
Sbjct: 143 EEEESDEERWKKKRNKWFECETCEKVFKSYQALGGHRASHKKKIA--ETDQLGSDELKKK 200
Query: 81 SKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSN 114
K S C C + F + L H+R H++
Sbjct: 201 KKKSTSSHH-ECPICAKVFTSGQALGGHKRSHAS 233
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 90 CACDTCGRSFVDQRTLMWHQRLHSNERPYVC--DVCGRGFVSLNRRNQHRVCAHSAPSRR 147
C + CG+ F+D L H +H+ ER Y+C + CG+ F SL+ + + HS +
Sbjct: 110 CDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAF-SLDFNLRSHMKTHSQENYH 168
Query: 148 -CP 149
CP
Sbjct: 169 ICP 171
Score = 30.7 bits (66), Expect = 0.83
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 38 FTCYY--CGKMYKSESSFEIHINKH-EEKIVNKEPRNVKQATTKDKSK------ADPSKP 88
F C Y CGK + S+ H + H E + V + K+ K K
Sbjct: 79 FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNY 138
Query: 89 RCACDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCG 124
C + CG++F L H + HS E ++C G
Sbjct: 139 ICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSG 174
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
T +F C C K +K + + ++H H K+ N +Q K K P K C
Sbjct: 65 TNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQ--VKKKVYICPEK-TCVHHD 121
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRCPLCPA 153
R+ D + H E+ + CD C + + ++ H ++C RC C
Sbjct: 122 PARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKIC--GTKEYRCD-CGT 178
Query: 154 LF 155
LF
Sbjct: 179 LF 180
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 38 FTCYYCGKMYKSESSFEIHINKH-EEKIVNKEPRNVKQATTKDKSKADPSK--PRCACDT 94
F C YC K + S + HI H E V K+ + K A K + C
Sbjct: 9 FLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVGCRE 68
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCD 121
CGR FV + L H H + + D
Sbjct: 69 CGRVFVSLKALRGHMACHGEVKKMLMD 95
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 97 RSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQHRVC 139
+ VDQR +M + H ++ C CGR FVSL H C
Sbjct: 45 KRLVDQRKMMAQK--HKQQQQVGCRECGRVFVSLKALRGHMAC 85
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 38.3 bits (85), Expect = 0.004
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 12/150 (8%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKD-KSKAD-PSKPRCAC 92
T +F C C K ++ E + ++H H P +KQ +TK+ K K +P C
Sbjct: 78 TNRFICEVCNKGFQREQNLQLHRRGH------NLPWKLKQKSTKEVKRKVYLCPEPSCVH 131
Query: 93 DTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLC 151
R+ D + H E+ + CD C + + V + + + C RC C
Sbjct: 132 HDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC--GTKEYRCD-C 188
Query: 152 PALFHLRSMVNTXXXXXXXXXXXXRRNRTS 181
LF R T R+ TS
Sbjct: 189 GTLFSRRDSFITHRAFCDALAQESARHPTS 218
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.9 bits (84), Expect = 0.005
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
T +F C C K ++ E + ++H H K+ N Q K K P K C
Sbjct: 3 TNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQ--VKKKVYICPEK-SCVHHD 59
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRCPLCPA 153
R+ D + H E+ + CD C + + ++ H ++C + RC C
Sbjct: 60 PARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKIC--GSREFRCD-CGT 116
Query: 154 LF 155
LF
Sbjct: 117 LF 118
Score = 28.3 bits (60), Expect = 4.4
Identities = 30/127 (23%), Positives = 46/127 (36%), Gaps = 8/127 (6%)
Query: 13 CEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNV 72
CEIC FQ E L H K K K++ +++I E+ V+ +P
Sbjct: 8 CEICNKGFQREQNLQLH---KRGHNLPWKLKQKTNKNQVKKKVYICP-EKSCVHHDPARA 63
Query: 73 KQATT--KDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSL 130
T K + + CD C + + H ++ R + CD CG F
Sbjct: 64 LGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKI-CGSREFRCD-CGTLFSRK 121
Query: 131 NRRNQHR 137
+ HR
Sbjct: 122 DSFISHR 128
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 26 LSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADP 85
+ EH D + + F C C + + S + H H K+ N + +++ + K K K
Sbjct: 25 IGEH-DGRKKRVFRCKTCERDFDSFQALGGHRASHS-KLTNSDDKSLP-GSPKKKPKTTT 81
Query: 86 SKPRCACDTCGRSFVDQRTLMWHQRLHSNER 116
+ C CG F + L H R H NE+
Sbjct: 82 TTTAHTCPICGLEFPMGQALGGHMRKHRNEK 112
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 37.9 bits (84), Expect = 0.005
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 36 KKFTCYYCGKMYKSESSFEIHINKH-EEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
+KF C +C K + S HI H E + + + D++ S
Sbjct: 7 RKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDEDEADKLKMIDENGGQSSYGLRENPK 66
Query: 95 CGRSFVDQRTLM---WHQRLHSNERPYVCDVCGRGFVSLNRRNQHRVCAHS 142
+ FVD R +M Q+ + C CG+GFVS H C HS
Sbjct: 67 KNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHMAC-HS 116
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVCD 121
C CG+ FV + L H HS V D
Sbjct: 95 CRECGKGFVSSKALCGHMACHSEREKIVMD 124
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 90 CACDTCGRSFVDQRTLMWHQRLHSNERPYVC 120
C CG++F + L+ HQR+HS++RP C
Sbjct: 1262 CPIKGCGKNFFSHKYLVQHQRVHSDDRPLKC 1292
Score = 33.9 bits (74), Expect = 0.090
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 6/128 (4%)
Query: 21 QSEDELSEHCDKKHTKKFTCYY--CGKMYKSESSFEIHI-NKHEEKIVNKEPRNVKQATT 77
+ E+E E +++ + C C + SE +H N K K + K
Sbjct: 1220 KEEEEEEEENEEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICPIKGCGKNFFSHKYLVQ 1279
Query: 78 KDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERPYVC--DVCGRGFVSLNRRNQ 135
+ +D +C C +F + H R+H+ RPYVC CG+ F ++ ++
Sbjct: 1280 HQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSR 1339
Query: 136 H-RVCAHS 142
H R HS
Sbjct: 1340 HKRKTGHS 1347
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 35.9 bits (79), Expect = 0.022
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVK--QATTKDKSKADPSKPRCACDT 94
+F+C C K + ++ ++H+ H + K P +++ Q T K P C +
Sbjct: 255 QFSCPLCFKTFNRYNNMQMHMWGHGSQY-RKGPESLRGTQPTAMLKLPCYCCAPGCKNNI 313
Query: 95 C---GRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF 127
R D RTL H + RP+ C CG+ F
Sbjct: 314 DHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAF 349
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 35.9 bits (79), Expect = 0.022
Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKD-KSKAD-PSKPRCAC 92
T +F C C K ++ E + ++H H P +KQ +TK+ K K +P C
Sbjct: 80 TNRFICDVCNKGFQREQNLQLHRRGH------NLPWKLKQKSTKEVKRKVYLCPEPTCVH 133
Query: 93 DTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLC 151
R+ D + H E+ + C+ C + + V + + + C RC C
Sbjct: 134 HDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC--GTKEYRCD-C 190
Query: 152 PALFHLRSMVNTXXXXXXXXXXXXRRNRTSKY 183
+F R T RN T +
Sbjct: 191 GTIFSRRDSYITHRAFCDALIQETARNPTVSF 222
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 35.9 bits (79), Expect = 0.022
Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 8/150 (5%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
T +F C C K ++ E + ++H H K+ N K+ K +PS C
Sbjct: 79 TNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSN-KEVRRKVYLCPEPS---CVHHD 134
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLCPA 153
R+ D + H E+ + CD C + + V + + + C RC C
Sbjct: 135 PARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC--GTKEYRCD-CGT 191
Query: 154 LFHLRSMVNTXXXXXXXXXXXXRRNRTSKY 183
+F R T RN T +
Sbjct: 192 IFSRRDSYITHRAFCDALIQESARNPTVSF 221
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 35.5 bits (78), Expect = 0.029
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCG 96
++ C C + ++ + + ++H +H K+ K + K + P +P C
Sbjct: 66 RYICEICNQGFQRDQNLQMHRRRH--KVPWKLLKRDNNIEVKKRVYVCP-EPTCLHHNPC 122
Query: 97 RSFVDQRTLMWH-QRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRC 148
+ D + H +R HSN + +VC+ C +G+ + H + C S C
Sbjct: 123 HALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDC 176
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 12 ICEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEP 69
+CE C + + + H T+ +C CG+++ SF H + + V++EP
Sbjct: 146 VCERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQDNCSARRVHREP 202
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 35.5 bits (78), Expect = 0.029
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVK--QATTKDKSKADPSKPRCACDT 94
+FTC C K + ++ ++H+ H + K P +++ Q T + P C +
Sbjct: 177 QFTCPLCFKTFNRYNNMQMHMWGHGSQY-RKGPESLRGTQPTGMLRLPCFCCAPGCKNNI 235
Query: 95 C---GRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF 127
+ D RTL H + +P+ C +CG+ F
Sbjct: 236 DHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAF 271
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 35.1 bits (77), Expect = 0.039
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 21 QSEDELSEHCDKKHTK-KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKD 79
+ E E ++ TK ++ C CGK++KS + H H++ V+ + T D
Sbjct: 155 EEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYD 214
Query: 80 KSKADPSKPRCACDTCGRSFVDQRTLMWHQRLH 112
+ +K C C R F + L H+R H
Sbjct: 215 -NVVVVAKRIHECPICLRVFASGQALGGHKRSH 246
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 58 NKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNER 116
NK +++V +E +++ +K +K R C+TCG+ F + L H+ H R
Sbjct: 142 NKSNKEVV-EEIETEEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNR 199
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 35.1 bits (77), Expect = 0.039
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGR 97
F C C K + S + H H+ K++N ++ + + K+K S P C CG
Sbjct: 37 FRCKTCLKEFSSFQALGGHRASHK-KLINSSDPSLLGSLSNKKTKTATSHP---CPICGV 92
Query: 98 SFVDQRTLMWHQRLHSNERPYVCDVCGRGFV 128
F + L H R H +E+ + R F+
Sbjct: 93 EFPMGQALGGHMRRHRSEKASPGTLVTRSFL 123
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 26 LSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADP 85
L++H + + +F C C K + S + H H++ + E ++VK + K
Sbjct: 35 LNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFH 94
Query: 86 SKPRCACDTCGRSFVDQRTLMWHQRLH 112
C C +SF + L H R H
Sbjct: 95 K-----CSICSQSFGTGQALGGHMRRH 116
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 34.7 bits (76), Expect = 0.051
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
T +F C C K ++ + + ++H H + K + KQ K K P K C
Sbjct: 79 TNRFVCEICNKGFQRDQNLQLHRRGH--NLPWKLKQRSKQEVIKKKVYICPIK-TCVHHD 135
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF 127
R+ D + H E+ + C+ C + +
Sbjct: 136 ASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKY 168
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 26 LSEHCDKKH-TKKFTCYYCGKMYKSESSFEIH 56
+ +H +KH KK+ C C K Y +S ++ H
Sbjct: 146 IKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAH 177
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 34.3 bits (75), Expect = 0.068
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSK---ADPSKPRCA 91
T +F C CGK ++ + + ++H H P +KQ T+K+ K P K C
Sbjct: 63 TNRFLCEVCGKGFQRDQNLQLHRRGH------NLPWKLKQRTSKEVRKRVYVCPEK-TCV 115
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPL 150
R+ D + H E+ + C+ C + + V + + + C RC
Sbjct: 116 HHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTC--GTREYRCD- 172
Query: 151 CPALFHLR 158
C +F R
Sbjct: 173 CGTIFSRR 180
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 26 LSEHCDKKH-TKKFTCYYCGKMYKSESSFEIH 56
+ +H +KH KK+TC C K Y +S ++ H
Sbjct: 129 IKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAH 160
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 34.3 bits (75), Expect = 0.068
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 41 YYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFV 100
Y CG YK+ SS++ + H+ R++ DKS + C CG+SF
Sbjct: 75 YKCGVCYKTFSSYQA-LGGHKAS-----HRSLYGGGENDKSTPSTAVKSHVCSVCGKSFA 128
Query: 101 DQRTLMWHQRLH 112
+ L H+R H
Sbjct: 129 TGQALGGHKRCH 140
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 34.3 bits (75), Expect = 0.068
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 40 CYYCGKMYKSESSFEIHINKH---EEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCG 96
C CGK ++ + H H +EK+ +E V +K + + + S C CG
Sbjct: 45 CKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCG 104
Query: 97 RSFVDQRTLMWHQRLHSNER 116
+ F R L H +LH + +
Sbjct: 105 KIFGCYRGLGGHTKLHRSTK 124
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQHRVCAHSAPSR 146
C TCGR F + + HQR+HS + D G + + + RVC+ SA R
Sbjct: 326 CKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERI-WGLKKKSRVCSVSAFDR 379
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 87 KPRCACDTCGRSFVDQRTLMWHQRLH 112
K C C CG+SFV + L H+R+H
Sbjct: 195 KSSCHCKICGKSFVCSQGLGNHKRVH 220
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 86 SKPRCACDTCGRSFVDQRTLMWHQRLH 112
SK C CG+SF + L HQR+H
Sbjct: 39 SKSSHKCKICGKSFECYQALGGHQRIH 65
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 86 SKPRCACDTCGRSFVDQRTLMWHQRLH 112
S+ C C +SFV + L HQRLH
Sbjct: 441 SRSSYKCSICEKSFVCSQALGSHQRLH 467
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 34.3 bits (75), Expect = 0.068
Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCG 96
++ C C + ++ + + ++H +H K+ K + + + P +P C
Sbjct: 69 RYVCEICNQGFQRDQNLQMHRRRH--KVPWKLLKRETNEEVRKRVYVCP-EPTCLHHNPC 125
Query: 97 RSFVDQRTLMWH-QRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRC 148
+ D + H +R HSN + ++C+ C +G+ + H + C S C
Sbjct: 126 HALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDC 179
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 33.9 bits (74), Expect = 0.090
Identities = 19/102 (18%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Query: 36 KKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTC 95
+ ++C +CG+ +KS + H+N H + +++ ++T + + + + D
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVLDVG 112
Query: 96 GRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFV-SLNRRNQH 136
+ V + T R + + + DVC + S +R +H
Sbjct: 113 SKVLVQEET-----RKPNGTKREISDVCNNNVLESSMKRYEH 149
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.9 bits (74), Expect = 0.090
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 51 SSFEIHINKHEEKIVNKEPRNVKQATTKDK--SKADPSKPRCA--CDTCGRSFVDQRTLM 106
SS++ K K V + ++ +K K K DP+ P+ C CGR F + L
Sbjct: 34 SSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKALF 93
Query: 107 WHQRLH 112
H R H
Sbjct: 94 GHMRCH 99
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 34 HTKKFTCYYCGKMYKSESSFEIHINKHEEKI---VNKEPRNVKQATTKDKSKADPSKPRC 90
H K + C CGK + S + H H + + VN V S
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTH 149
Query: 91 ACDTCGRSFVDQRTLMWHQRLH 112
C C +SF + L H+R H
Sbjct: 150 NCSICFKSFPSGQALGGHKRCH 171
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 33.9 bits (74), Expect = 0.090
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 16 CGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQA 75
C M+ E C + F C C K + S + H H+ K++N + ++ +
Sbjct: 19 CLMLLSRVGECGGGCGGDE-RVFRCKTCLKEFSSFQALGGHRASHK-KLINSDNPSLLGS 76
Query: 76 TTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNER 116
+ K+K S P C CG F + L H R H NE+
Sbjct: 77 LSNKKTKT--SHP---CPICGVKFPMGQALGGHMRRHRNEK 112
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 21 QSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDK 80
+++ + ++ K +F C CGK++KS + H H++ NK + +
Sbjct: 177 ETDHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKK---NKACMTKTEQVETEY 233
Query: 81 SKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSN 114
K C C R F + L H+R H +
Sbjct: 234 VLGVKEKKVHECPICFRVFTSGQALGGHKRSHGS 267
Score = 30.7 bits (66), Expect = 0.83
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 55 IHINKHEEKIVNKEPRNVKQATTKDKS---KADPSKPRCACDTCGRSFVDQRTLMWHQRL 111
I +++ + K K+ + V++ T S K+ S+ R C+TCG+ F + L H+
Sbjct: 156 IMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRAS 215
Query: 112 HSNER 116
H +
Sbjct: 216 HKKNK 220
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 33.5 bits (73), Expect = 0.12
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADP---SKPRCA 91
T +F C C K ++ + + ++H H P +KQ TK++ K + CA
Sbjct: 79 TNRFVCEICNKGFQRDQNLQLHRRGH------NLPWKLKQKNTKEQQKKKVYVCPETNCA 132
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRCPL 150
R+ D + H E+ + C+ C + + + H ++C RC
Sbjct: 133 HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKIC--GTRDYRCD- 189
Query: 151 CPALF 155
C LF
Sbjct: 190 CGTLF 194
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 97 RSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQH 136
R ++D+R+ W S RPY+C+ C RGF + H
Sbjct: 3 RKYLDRRSYSWSG---SQARPYICEFCERGFSNAQALGGH 39
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 59 KHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERPY 118
K++E N + ++ ++ KDK K + + R C C R+F + L HQ H ER +
Sbjct: 66 KNDESSENIKDKDKEK--DKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQH 123
Score = 27.9 bits (59), Expect = 5.9
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 23 EDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEK 63
E + + D + ++F C+YC + + + + H N H+ +
Sbjct: 80 EKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRE 120
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 13 CEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEP 69
C C F E L +H KH F C+ C K + S IH+ + ++ V K P
Sbjct: 14 CYYCDREFDDEKILVQHQKAKH---FKCHVCHKKLSTASGMVIHVLQVHKENVTKVP 67
>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 22 SEDELSEHCDKKHTKK-FTCYYCGKMYKSESSFEIHINK--HEEKIVNKEPRNVKQATTK 78
+E E D K +K F C C K Y++ FE H++ H K KE + + A+ +
Sbjct: 144 AEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEMHGASGR 203
Query: 79 DKSK 82
D+ K
Sbjct: 204 DERK 207
>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 22 SEDELSEHCDKKHTKK-FTCYYCGKMYKSESSFEIHINK--HEEKIVNKEPRNVKQATTK 78
+E E D K +K F C C K Y++ FE H++ H K KE + + A+ +
Sbjct: 144 AEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEMHGASGR 203
Query: 79 DKSK 82
D+ K
Sbjct: 204 DERK 207
>At2g40850.1 68415.m05043 phosphatidylinositol 3- and 4-kinase
family protein contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 561
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 60 HEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHS 113
H+EK ++ R KQ +SK+ P P ++ G SFVD T+ W L S
Sbjct: 486 HQEKSAKEKKRGGKQERCTVRSKSPPISPN-HDESKGVSFVDMTTVEWDTFLQS 538
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 32.3 bits (70), Expect = 0.27
Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 12/156 (7%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCAC-- 92
T +F C C K ++ + + ++H H P ++Q +TK+ K P C
Sbjct: 58 TNRFVCEICNKGFQRDQNLQLHRRGH------NLPWKLRQRSTKEVRKKVYVCPVSGCVH 111
Query: 93 DTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLC 151
R+ D + H E+ + C+ C + + V + + ++C +C C
Sbjct: 112 HDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKIC--GTKEYKCD-C 168
Query: 152 PALFHLRSMVNTXXXXXXXXXXXXRRNRTSKYQDVP 187
LF R T +N T + P
Sbjct: 169 GTLFSRRDSFITHRAFCDALAEESAKNHTQSKKLYP 204
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 10 VHICEICGMIFQSEDE-------LSEHCDKKH-TKKFTCYYCGKMYKSESSFEIH 56
V++C + G + + +H +KH KK+ C C K Y +S ++ H
Sbjct: 101 VYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAH 155
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 32.3 bits (70), Expect = 0.27
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCAC-- 92
T +F C C K ++ + + ++H H P ++Q + K+ K P +C
Sbjct: 60 TNRFVCEICNKGFQRDQNLQLHRRGH------NLPWKLRQKSNKEVKKKVYVCPEVSCVH 113
Query: 93 DTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLC 151
R+ D + H E+ + CD C + + V + + ++C +C C
Sbjct: 114 HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKIC--GTKEYKCD-C 170
Query: 152 PALFHLR 158
LF R
Sbjct: 171 GTLFSRR 177
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.3 bits (70), Expect = 0.27
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCAC-- 92
T +F C CGK ++ + + ++H H P +KQ T+K+ K P +C
Sbjct: 67 TNRFLCEICGKGFQRDQNLQLHRRGH------NLPWKLKQRTSKEVRKRVYVCPEKSCVH 120
Query: 93 DTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLC 151
R+ D + H E+ + C+ C + + V + + + C RC C
Sbjct: 121 HHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTC--GTREYRCD-C 177
Query: 152 PALFHLR 158
+F R
Sbjct: 178 GTIFSRR 184
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVK--QATTKDKSKADPSKPRCACDT 94
+F+C C K + ++ ++H+ H + K P +++ Q T + P C +
Sbjct: 216 QFSCPVCFKTFNRYNNMQMHMWGHGSQY-RKGPESLRGTQPTGMLRLPCYCCAPGCRNNI 274
Query: 95 C---GRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF 127
+ D RTL H + +P++C CG+ F
Sbjct: 275 DHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAF 310
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 33 KHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCAC 92
K K+TC CGK+ +S + H H+ K + +N + + C
Sbjct: 223 KKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNY------FGEDGPIVRRQYEC 276
Query: 93 DTCGRSFVDQRTLMWHQRLH 112
C R F + L H+++H
Sbjct: 277 QICNRMFASGQALGGHKKIH 296
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 80 KSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERPYVCD 121
K K + + CDTCG+ + L H+ H +R + D
Sbjct: 218 KRKRGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISD 259
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 31.5 bits (68), Expect = 0.48
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Query: 1 MRCSVQADAVHICEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSF--EIHIN 58
+R +Q+ + H C+ICG F+ L H K + YK ++S +
Sbjct: 81 LRSKLQSKSSHRCQICGKSFECYQALGGHRRLHRPIKGKLARKREYYKDDNSLFDSSGPS 140
Query: 59 KHEEKIVN----KEPRNVKQATTKDKSKADPSKPRCACDTCGRS---FVDQRTLMWHQRL 111
+ EEKI++ K+ K S C CG+S F L HQRL
Sbjct: 141 RVEEKILDCVELKQDFGELLPLNSKFQKRPVSSCSYRCKICGKSFGCFQALGALGGHQRL 200
Query: 112 H 112
H
Sbjct: 201 H 201
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 31.5 bits (68), Expect = 0.48
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEE--KIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
++ C C + ++ + + ++H +H+ K++ R+ K + + P +P C
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK---RDKKDEEVRKRVYVCP-EPTCLHHD 93
Query: 95 CGRSFVDQRTLMWH-QRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRC 148
+ D + H +R HS + +VC+ C +G+ + H + C S C
Sbjct: 94 PCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCDC 149
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 8 DAVHICEICGMIFQSEDELSEHCDKKHTKKF----TCYYCGKMYKSESSFEIHINKHEEK 63
D H+C C + + ++EL H + KK T C + ++ I E +
Sbjct: 676 DLPHLCTSCSVRLKQKEELDRHMELHDKKKLELSGTNSKCRVWFPKVDNW-IAAKAGELE 734
Query: 64 IVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVD 101
+E + ++ +D + +CAC CG F D
Sbjct: 735 PEYEEVLSEPESAIEDCQAVAADETQCACILCGEVFED 772
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTC-- 95
F+C+ C K + ++ ++H+ H + K P ++K T P C + C
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQY-RKGPESLK-GTQPRAMLGIPCY--CCVEGCRN 200
Query: 96 ------GRSFVDQRTLMWHQRLHSNERPYVCDVCGR 125
+ D RTL H + +P+ C +CG+
Sbjct: 201 HIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGK 236
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 30.7 bits (66), Expect = 0.83
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDT 94
T +F C C K ++ + + ++H H K+ R+ K+ K K P + C
Sbjct: 96 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ-RSNKEVIRK-KVYVCP-EASCVHHD 152
Query: 95 CGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGF-VSLNRRNQHRVCAHSAPSRRCPLCPA 153
R+ D + H E+ + CD C + + V + + + C RC C
Sbjct: 153 PSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTC--GTKEYRCD-CGT 209
Query: 154 LFHLR 158
LF R
Sbjct: 210 LFSRR 214
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 25 ELSEHCD--KKHTKKFTCYYCGKMYKSESSFEIH--INKHEEKI 64
EL E D K+ ++ C C K +KSE ++ H KH+EK+
Sbjct: 293 ELEEEDDDAKRKNEQLYCIVCSKKFKSEKQWKNHEQSKKHKEKV 336
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 13 CEICGMIFQSEDELSEH-CDKKHTKK-------FTCY--------YCGKMYKSESSFEIH 56
C +C F+SE + H KKH +K FT Y G + ES E+H
Sbjct: 310 CIVCSKKFKSEKQWKNHEQSKKHKEKVAELRESFTDYEEENEEEEIDGPLDSPESVEELH 369
Query: 57 INKHEEKIVNKEPRNVKQATTKDKSKAD 84
EE ++ E R+VK+ + + D
Sbjct: 370 EKLQEELNIDNEERDVKKEVVGEADETD 397
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.7 bits (66), Expect = 0.83
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSK-ADPSKPRCACDTCG 96
F C C K++ S + H H K E A K +SK PS CD C
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGA-DAGEKTRSKMLSPSGKIHKCDICH 251
Query: 97 RSFVDQRTLMWHQRLH 112
F + L H+R H
Sbjct: 252 VLFPTGQALGGHKRRH 267
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGR 97
+ C CG+ S + H H K N + K A PS C C R
Sbjct: 750 YQCNVCGRELPSYQALGGHKASHRTK---PPVENATGEKMRPKKLA-PSGKIHKCSICHR 805
Query: 98 SFVDQRTLMWHQRLH 112
F ++L H+RLH
Sbjct: 806 EFSTGQSLGGHKRLH 820
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 28 EHCDKKHTKK-FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPS 86
E+ D K+ FTC C K + S + H H K+P N ++ K S
Sbjct: 28 ENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASH------KKPNNDALSSGLMKKVKTSS 81
Query: 87 KPRCACDTCGRSFVDQRTLMWHQRLHSNE 115
P C CG F + L H R H NE
Sbjct: 82 HP---CPICGVEFPMGQALGGHMRRHRNE 107
>At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 104
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 37 KFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPR 89
K+ C +C + +IH K+ +EPRN+ +A + A+ SKP+
Sbjct: 46 KYECPHCKITVPDLKTMQIHHESKHPKLTYEEPRNLHEALA---APAESSKPK 95
>At3g58070.1 68416.m06473 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 253
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 21 QSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEK 63
Q+ D +++ H ++F C+YC + + + + H N H+ +
Sbjct: 74 QTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRE 116
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/75 (20%), Positives = 29/75 (38%)
Query: 42 YCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVD 101
+ G+ + + E + + ++ K +E + + + R C C R+F
Sbjct: 43 FTGRDFSITTGQEDYTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPT 102
Query: 102 QRTLMWHQRLHSNER 116
+ L HQ H ER
Sbjct: 103 SQALGGHQNAHKRER 117
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 13/128 (10%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKD---KSKADPSKPRCA 91
T +F C C K ++ + + ++H H P +KQ + KD K +P C
Sbjct: 89 TNRFICEVCNKGFQRDQNLQLHKRGH------NLPWKLKQRSNKDVVRKKVYVCPEPGCV 142
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNERPYVCDVCGRGFVSLNRRNQH-RVCAHSAPSRRCPL 150
R+ D + H E+ + C+ C + + + H + C +C
Sbjct: 143 HHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTC--GTKEYKCD- 199
Query: 151 CPALFHLR 158
C LF R
Sbjct: 200 CGTLFSRR 207
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 60 HEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNER 116
HEE +K+ N + KD +K + R C C R+F + L HQ H ER
Sbjct: 30 HEES-ESKDNYNENNESIKDDNK----EKRFKCHYCFRNFPTSQALGGHQNAHKRER 81
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 10 VHICEICGMIFQSEDELSEH---CDKKHTKKFTCYYCGKMYKSESSFEI 55
+ + E C I +S S H C+ TKKFTC +C +E+S E+
Sbjct: 866 MQVIEKCSTINKSSSGGSAHLRRCNGSLTKKFTCAFCQCSEDTEASGEM 914
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 12 ICEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKM 46
+CE C F ++EL H ++H +TC+ C ++
Sbjct: 199 MCEFCKRPFYGDNELYTHMSREH---YTCHICQRL 230
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 50 ESSFEIHINKHEEKIVNKEPRNVKQATTKDKSKADPSKPRC-ACDTCGRSFVDQRTLMWH 108
E+S ++K E V+ + + KS + PR +C+ C R F + L H
Sbjct: 18 EASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGH 77
Query: 109 QRLHSNER 116
Q H ER
Sbjct: 78 QNAHKRER 85
>At5g37080.1 68418.m04451 hypothetical protein includes At5g37080,
At5g37170, At2g05090
Length = 566
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 66 NKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVD 101
N++ VK++T+ K P KP+ CD C S +
Sbjct: 312 NRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITN 347
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 73 KQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERPY 118
K+ K K P K C CGR F + + H R H +R Y
Sbjct: 121 KKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFGHMRAH-RDRNY 165
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDK 80
+TC C ++ + F H++ H + NKE +A K K
Sbjct: 169 YTCPKCNSIFDTSQKFAAHMSSHYKSETNKERAQRFRARNKRK 211
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/38 (34%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 179 RTSKYQDVPWR-TETVPIQELSVSIQDEI-LELQNAKR 214
+ ++Y ++P R T+ P+Q+L +S++ E+ L+L+N K+
Sbjct: 251 KAAEYMEIPVRRTDDEPLQKLFMSVRSELNLDLKNMKQ 288
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 13 CEICGMIFQSEDELSEHCDKKHTKKFTCYY-CGKMYKSESSFEIHINKHEEKIVNKEP 69
C G IF E L+ +K T+ T +Y CG++ +S+F +H + IV K+P
Sbjct: 609 CTADGSIFHFE--LTTKAVEKDTRNRTPHYLCGQLTMKDSTFIVHSPVPDIPIVLKKP 664
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 89 RCACDTCGRSFVDQRTLMWHQRLHSNER 116
R C CG+ F + + L HQ H ER
Sbjct: 59 RHECQYCGKEFANSQALGGHQNAHKKER 86
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 36 KKFTCYYCGKMYKSESSFEIHINKHEEKIVNKE 68
K+ C YCGK + + + H N H+++ + K+
Sbjct: 58 KRHECQYCGKEFANSQALGGHQNAHKKERLKKK 90
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 58 NKHEEKIVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLH 112
N HE K ++ E +V++ ++K C CG+ FV + L H+R+H
Sbjct: 55 NDHEAKSMDLEQGDVEEEEGEEKKHI--------CCECGKRFVSGKALGGHKRIH 101
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 36 KKFTCYYCGKMYKSESSFEIHINKH---EEKIVNKEPRNVKQATTKDKSKADPSKPRCAC 92
KK C CGK + S + H H K P+ V +++ AC
Sbjct: 77 KKHICCECGKRFVSGKALGGHKRIHVLETRKFSMMRPKMVSGMV----GRSERGDLEVAC 132
Query: 93 DTCGRSFVDQRTLMWHQRLH 112
C + F + L H R H
Sbjct: 133 CVCYKKFTSMKALYGHMRFH 152
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 25 ELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEK 63
E+ + K K +TC++C K + + + H N H+++
Sbjct: 67 EIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQE 105
>At5g20670.1 68418.m02455 expressed protein
Length = 153
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 76 TTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNER-PYVCDVCGRGFVSLNRRN 134
T S + P+ CDTCG F ++ T + R+ + ++C +C R+
Sbjct: 12 TNTKPSSSLPAVESVTCDTCG--FAEECTPAYINRVKERHKGHWLCGLCAEAVKDEVVRS 69
Query: 135 QHRVCAHSAPSRRCPLC 151
R+ A R C
Sbjct: 70 STRISVEEALRRHTTFC 86
>At3g29330.1 68416.m03683 expressed protein
Length = 232
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 1 MRCSVQADAVHICEICGMIFQSEDELSEH-CDKKHTKK 37
+ C V +++ +C IC ++ S+ ++H +KH K
Sbjct: 184 VECGVSNESIRLCRICNVVCNSDIVYNDHLAGQKHAAK 221
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 80 KSKADPSKPRCACDTCGRSFVDQRTLMWHQRLHSNERP 117
K D K D CG+ + + +W QRL N P
Sbjct: 343 KCPHDGCKSELVIDACGKLLTPKLSKLWQQRLQENAIP 380
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 12 ICEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHE-EKIVNKEPR 70
+ E M S + + + F+C YC + + S + H N H+ E+ + K+ R
Sbjct: 26 VLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSR 85
Query: 71 NV-KQATTKDKSKADPSKPR 89
+ + + T D + P R
Sbjct: 86 ELFRSSNTVDSDQPYPFSGR 105
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 68 EPRNVKQATTKD-KSKADPSKPRC-ACDTCGRSFVDQRTLMWHQRLHSNER 116
EP ++ +++ S + +PR +C+ C R F + L HQ H ER
Sbjct: 28 EPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLER 78
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 54 EIHINKHEEKIVN---KEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQR 110
++H + HE +++ V ++TT + K +C+ C R+F + L HQ
Sbjct: 28 DVHNSSHELNLIDCIDDTTSIVNESTTSTEQKL------FSCNYCQRTFYSSQALGGHQN 81
Query: 111 LHSNER 116
H ER
Sbjct: 82 AHKRER 87
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 16 CGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINK 59
C +S D +H + +HT +C C ++Y + IHI++
Sbjct: 151 CPERLKSLDHFEDHYNARHTA--SCSVCSRVYPTSRLLSIHISE 192
>At3g16730.1 68416.m02136 expressed protein ; expression supported
by MPSS
Length = 695
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 35 TKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKS-KADPSKPRCACD 93
T + CY K + S ++H K+E++ ++ + K TK KS ++ P K R C
Sbjct: 584 TNEPMCYTAVKPF-SVRLLKVHNRKNEKRGIHLPQKRAKSPITKGKSHESPPPKKRNTCS 642
Query: 94 TCGRS 98
++
Sbjct: 643 VSSQT 647
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
Query: 10 VHICEICGMIFQSEDELSEH-CDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKE 68
V+ C+ C F S L H K K + +K +S+++ ++ H ++
Sbjct: 181 VYQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHK-KSNYDDAVSLHLNNVLTTT 239
Query: 69 PRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLH 112
P N + + C CG F + L H R H
Sbjct: 240 PNNNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRH 283
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 4 SVQADAVHICEICGMIFQSEDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEK 63
S Q H C IC F S H + H+ ++ GKM K + K +
Sbjct: 42 SPQPQRKHFCVICEKQFSSGKAYGGHV-RIHSIEYNNK--GKMKKMKKMKLKKKKKRKIG 98
Query: 64 IVNKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQRTLMWHQRLH 112
+V KE K+ D ++ D + + C CG+ F +L H R H
Sbjct: 99 LVKKEKE--KEI---DLARTDV-EGKIRCCLCGKEFQTMHSLFGHMRRH 141
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 113 SNERPYVCDVCGRGFVSLNRRNQHRVCAHSAPS 145
S+ R Y C VCG+ F S H+ +H P+
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKT-SHRKPT 123
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 99 FVDQRTLMWHQRLHSNERP--YVCDVCGRGFVSLNRRNQH 136
F +++ + ++ SNE P Y C +C +G+ S QH
Sbjct: 47 FEARQSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH 86
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 99 FVDQRTLMWHQRLHSNERP--YVCDVCGRGFVSLNRRNQH 136
F +++ + ++ SNE P Y C +C +G+ S QH
Sbjct: 47 FEARQSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH 86
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 92 CDTCGRSFVDQRTLMWHQRLHSNER 116
CD C R F + + L H +H ER
Sbjct: 23 CDICKRGFTNPQALGGHNNIHRRER 47
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 10 VHICEICGMIFQSEDELSEHCDKKHTK 36
V +C CG F S L EH +K H +
Sbjct: 212 VEVCPQCGAKFSSVTSLVEHVEKTHER 238
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 38 FTCYYCGKMYKSESSFEIHINKHEEKIVNK-----EPRNVKQATTKDKSKADPSKPRCAC 92
+ C C K + S + H H + + + + ATT K C
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSH-VC 138
Query: 93 DTCGRSFVDQRTLMWHQRLH 112
C +SF + L H+R H
Sbjct: 139 TICNKSFPSGQALGGHKRCH 158
>At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) contains
Pfam PF02732 : ERCC4 domain; contains TIGRFAM TIGR00596:
DNA repair protein (rad1); almost identical to 5' repair
endonuclease (GI:8926611) [Arabidopsis thaliana]
Length = 956
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 66 NKEPRNVKQATTKDKSKADPSKPRCACDTCGRSFVDQR 103
N EP K + TK K+K DP+ R + +C + + +
Sbjct: 525 NPEPHVDKASCTKGKAKKDPTSLRRSLRSCNKKTTNSK 562
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 81 SKADPSKPRC-ACDTCGRSFVDQRTLMWHQRLHSNER 116
S A P+ R C C R F + L HQ H ER
Sbjct: 28 SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 64
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 109 QRLHSNERPYVCDVCGRGFVS 129
Q H + P +C+VCG+GF S
Sbjct: 133 QLTHLPQGPPMCNVCGKGFAS 153
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 86 SKPRCACDTCGRSFVDQRTLMWHQRLHSNER 116
SK +C+ C R F + L HQ H ER
Sbjct: 81 SKRVFSCNYCQRKFYSSQALGGHQNAHKRER 111
>At1g55545.1 68414.m06357 nucleoporin-related similar to nucleoporin
CAN [Xenopus laevis] gi|5764080|emb|CAB53357
Length = 824
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 23 EDELSEHCDKKHTKKFTCYYCGKMYKSESSFEIHINKHEEKIVNKEPRNVKQATTKDKSK 82
ED+LS+ +KH + + + + F E I +KE +VK + + D +K
Sbjct: 451 EDDLSKQSSEKHQQLNIAVQNDQKHLNTEKFSTEQRLPNENIFSKEFESVKSSVSGDNNK 510
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.132 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,135,944
Number of Sequences: 28952
Number of extensions: 196503
Number of successful extensions: 1016
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 806
Number of HSP's gapped (non-prelim): 222
length of query: 225
length of database: 12,070,560
effective HSP length: 79
effective length of query: 146
effective length of database: 9,783,352
effective search space: 1428369392
effective search space used: 1428369392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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