Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000132-TA|BGIBMGA000132-PA|IPR000322|Glycoside
hydrolase, family 31
         (849 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       28   0.23 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    28   0.23 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    28   0.23 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   5.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   5.0  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 64  HKVIITSEPLKLEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGT 123
           H + +T   +K+ F ++  ++   L    ++  +  R R E+   +      Q   E+ T
Sbjct: 41  HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQT 100

Query: 124 WSETFQSHHD 133
            S   Q HHD
Sbjct: 101 HSSIHQHHHD 110


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 64  HKVIITSEPLKLEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGT 123
           H + +T   +K+ F ++  ++   L    ++  +  R R E+   +      Q   E+ T
Sbjct: 192 HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQT 251

Query: 124 WSETFQSHHD 133
            S   Q HHD
Sbjct: 252 HSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 64  HKVIITSEPLKLEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGT 123
           H + +T   +K+ F ++  ++   L    ++  +  R R E+   +      Q   E+ T
Sbjct: 251 HALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQT 310

Query: 124 WSETFQSHHD 133
            S   Q HHD
Sbjct: 311 HSSIHQHHHD 320


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 116 QLDDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPEHTDGLAL--KTTTSG 172
           Q+  E+  W      HH   P  +   + +  FP+  H   +  H DG  L    T SG
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVHSGMV--HNDGTQLMPSPTVSG 93


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 116 QLDDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPEHTDGLAL--KTTTSG 172
           Q+  E+  W      HH   P  +   + +  FP+  H   +  H DG  L    T SG
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVHSGMV--HNDGTQLMPSPTVSG 93


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,509
Number of Sequences: 317
Number of extensions: 10487
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 5
length of query: 849
length of database: 114,650
effective HSP length: 63
effective length of query: 786
effective length of database: 94,679
effective search space: 74417694
effective search space used: 74417694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)