SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000132-TA|BGIBMGA000132-PA|IPR000322|Glycoside
hydrolase, family 31
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609...   731   0.0  
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211...   296   4e-80
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365...   292   7e-79
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645...   270   3e-72
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170...   169   8e-42
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853...   113   6e-25
01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924...    56   9e-08
01_01_0796 + 6190931-6192745                                           34   0.41 
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320...    33   0.96 
06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423           32   1.7  
11_06_0313 + 22306497-22308938                                         32   2.2  
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871...    31   2.9  
04_01_0171 - 1927238-1928728,1928819-1929016                           31   3.9  
02_05_0908 + 32668706-32669140,32669772-32669957,32670316-326704...    31   3.9  
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997...    30   6.7  
08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271           30   6.7  
02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665     30   8.9  

>03_02_0168 +
           6094658-6096220,6096335-6096608,6096671-6096821,
           6097052-6097262,6097344-6097550,6097982-6098350
          Length = 924

 Score =  731 bits (1806), Expect = 0.0
 Identities = 344/756 (45%), Positives = 495/756 (65%), Gaps = 43/756 (5%)

Query: 116 QLDDEEG-TWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPEH-TDGLALKTTTS-- 171
           Q   +EG TW E F+SH D++PRG ++++ DV F  AD VYG+PEH +  LAL+ T    
Sbjct: 189 QESKQEGETWEEQFRSHTDTRPRGPQSITFDVSFYGADFVYGLPEHGSTSLALRPTRGPG 248

Query: 172 ---GDPYRLYNLDVFEYILDSRMAIYGSVPVMYAHGPKRTVGVFWHNSAETWIDVVNYGE 228
               +PYRL+NLDVFEY+ +S   +YGS+P M AHG   + G FW N+AE  IDV+  G 
Sbjct: 249 AEESEPYRLFNLDVFEYLHESPFGLYGSIPFMIAHGDGPSSGFFWLNAAEMQIDVLAPGW 308

Query: 229 GNVVSSLVNLVTGGQKKRVDARFLSESGIVDMFVLMGSTPGDAFRQYTALTGTTPLPPKF 288
               S+        +  R+D  +++E+G+VD F  +GS P D  +QY ++TGT  +P +F
Sbjct: 309 DGASST--------ENGRIDTLWMAEAGVVDAFFFVGSEPKDVIKQYISVTGTPSMPQQF 360

Query: 289 SLGYHQCRWNYMDEADVRSVDENFDVHDIPMDSIWLDIEYTNKKMYFTWDVVKFPHPAEM 348
           ++ YHQCRWNY DE DV  VD  FD HDIP D +WLDIE+T+ K YFTWD   FP+P  M
Sbjct: 361 AVAYHQCRWNYRDEEDVAGVDSGFDEHDIPYDVLWLDIEHTDGKRYFTWDHSAFPNPEVM 420

Query: 349 VANLTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDF 408
              +  KGRKMV IVDPHIKR+  + LHE+AT  GYYVKD  GKD++GWCWPG+SSYPD 
Sbjct: 421 QGKIADKGRKMVTIVDPHIKRDSSFHLHEEATAKGYYVKDATGKDFDGWCWPGASSYPDM 480

Query: 409 FNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEG 468
            NP +  +++D++ +EN+ G++  +++WNDMNEPSVFNGPEVTMP+D  HY         
Sbjct: 481 LNPEIREWWADKFSYENYKGSTPTLYIWNDMNEPSVFNGPEVTMPRDAVHYGDV------ 534

Query: 469 LAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTA 528
                EHR +HN YG +   AT  GLL R +G  RPF+L+RA FAG+QRY A+WTGDN+A
Sbjct: 535 -----EHRELHNAYGYYFHMATADGLLKRGEGKDRPFVLSRAFFAGSQRYGAIWTGDNSA 589

Query: 529 EWSFLAASVPMCLSLAIAGNSF-----CGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAH 583
           +W  L +S+PM L+L + G +F      G+D+GGFF  PE +L+ RWYQ  AF PFFR H
Sbjct: 590 DWDHLKSSIPMVLTLGLTGMTFSVGALTGADIGGFFGNPEPDLLVRWYQVGAFYPFFRGH 649

Query: 584 SHIETKRREPWLYPAATTALIRDANRKRYALLDFWYTLFYEHTVDGLPVMRPLFQHYPDE 643
           +H +TKRREPWL+    TAL+R+A   RY+LL ++YTLF E +V G+PVMRPL+  +PD+
Sbjct: 650 AHHDTKRREPWLFGERRTALMREAIHMRYSLLPYYYTLFREASVTGVPVMRPLWLEFPDD 709

Query: 644 PATYPIDDQYLLGDALLVKPVTTAGASSVEVYLPGDGPWYDVDTYVPHKGPRITQPVTIS 703
             TY   + +++G +LL + +   G  SV VYLPG+  WYD+    P+KG  ++  + +S
Sbjct: 710 KETYNNGEAFMVGPSLLAQGIYEEGQKSVSVYLPGEELWYDLRNGSPYKG-GVSHKLEVS 768

Query: 704 K--IPVYQRGGTIVPRRERVRRSSALMADDPFTLVVALDANNSARGSLYIDDGETYEYKN 761
           +  IP +QR G IVPR++R RRSS  M +DP+TLV+AL+++++A G LY+DDG++Y+Y+ 
Sbjct: 769 EDSIPSFQRAGAIVPRKDRFRRSSTQMVNDPYTLVIALNSSSAAEGELYVDDGKSYDYQQ 828

Query: 762 NKYIYAKIEFGPDEMT-YTLASE---GAQYPTGAWLERVVVAGIRAAPRSARLQQDGRQT 817
             +I+ +  F  +++T   +A +     ++ T   +ER+++ G+ +  + A ++    + 
Sbjct: 829 GAFIHRRFVFADNKLTSMNIAPKNLGNKKFSTECVIERIIILGVSSGSKKAIVEPGNHEV 888

Query: 818 ALQM---TLHKGNDVL--VLRKPAASMARPWTITFA 848
            +++   +L  G+  +   +RKP   +   WTI  A
Sbjct: 889 DIELGPISLRSGSSSVAPTVRKPNVRVVDDWTIRIA 924


>06_03_1114 +
           27719099-27719252,27719340-27719570,27720508-27721148,
           27721225-27722124
          Length = 641

 Score =  296 bits (727), Expect = 4e-80
 Identities = 192/534 (35%), Positives = 264/534 (49%), Gaps = 26/534 (4%)

Query: 256 GIVDMFVLMGSTPGDAFRQYTALTGTTPLPPKFSLGYHQCRWNYMDEADVRSVDENFDVH 315
           G++D +   G +P     QYT L G     P +S G+HQCRW Y + +D+  V   +   
Sbjct: 17  GVLDFYFFAGPSPLAVVDQYTQLIGRPAPMPYWSFGFHQCRWGYKNVSDLEGVVAGYAKA 76

Query: 316 DIPMDSIWLDIEYTNKKMYFTWDVVKFPHP--AEMVANLTAKGRKMVVIVDPHIKREPGY 373
            IP+D +W DI+Y +    FT D   FP       V  L   G+K VVI+DP I     Y
Sbjct: 77  RIPLDVMWTDIDYMDAFKDFTLDPANFPADLLRPFVDRLHRNGQKYVVIIDPGISVNATY 136

Query: 374 FLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDV 433
                A +   ++K  +G +Y G  WPG+ S+PDF NP  + +++       F  T    
Sbjct: 137 GTFIRAIKEDIFLK-WNGSNYLGVVWPGNVSFPDFLNPRAAEFWA--REIAAFRRTLPVD 193

Query: 434 HLWNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLE---------GLAAYW---EHRHVHNE 481
            LW DMNE S F  P      D   Y+    G+            A ++        HN 
Sbjct: 194 GLWIDMNEISNFVDPPPLNALDDPPYRIDNSGVRRPINNKTVPASAVHYGGVAEYDAHNL 253

Query: 482 YGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTAEWSFLAASVPMCL 541
           +G    RAT+  LL   D   RPF+L+R+ F G+ RY+A WTGDN A W  L  S+   L
Sbjct: 254 FGFLEARATHDALL--RDTGRRPFVLSRSTFVGSGRYTAHWTGDNFATWDDLRYSINTML 311

Query: 542 SLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATT 601
           S  + G    G+D+ GF      EL +RW Q  AF PF R HS I T RRE +L+ +   
Sbjct: 312 SFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVAR 371

Query: 602 ALIRDANRKRYALLDFWYTLFYEHTVDGLPVMRPLFQHYPDEPATYPIDDQYLLGDALLV 661
           +  R A   RY LL + YTL YE    G P+ RPLF  YP + ATY ID Q+LLG  +LV
Sbjct: 372 S-ARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVATYGIDRQFLLGRGVLV 430

Query: 662 KPVTTAGASSVEVYLPGDGPW---YDVDTYVPHK-GPRITQPVTISKIPVYQRGGTIVPR 717
            PV   GA++V  Y P  G W   YD    V  K G R+T P     + V+  GG I+  
Sbjct: 431 SPVLEPGATTVTAYFPA-GRWFSLYDFSLAVATKTGKRVTLPAPADTVNVHVAGGNILTL 489

Query: 718 RERVRRSSALMADDPFTLVVALDANNSARGSLYIDDGETYEYKNNKYIYAKIEF 771
           ++    SS  +      L+VAL  + +A G L++DDGE+ E    +  +++I+F
Sbjct: 490 QQPALTSSR-VRQSVVHLLVALAEDGTATGDLFLDDGESPEMVGARSRWSQIKF 542


>07_03_0104 +
           13434954-13435145,13436220-13436288,13436386-13436523,
           13436612-13436729,13437214-13437296,13438305-13438400,
           13438552-13438720,13438798-13438940,13439027-13439113,
           13439197-13439382,13439956-13440123,13441028-13441148,
           13441453-13441522,13441694-13441781,13441866-13442018
          Length = 626

 Score =  292 bits (717), Expect = 7e-79
 Identities = 170/486 (34%), Positives = 242/486 (49%), Gaps = 21/486 (4%)

Query: 266 STPGDAFRQYTALTGTTPLPPKFSLGYHQCRWNYMDEADVRSVDENFDVHDIPMDSIWLD 325
           +TP +     +   GT  +PPK+SLGY QCRW+Y     V  V   F    IP D +W+D
Sbjct: 159 NTPSEVMSSLSHAIGTVSMPPKWSLGYQQCRWSYDSSEKVLKVVRTFREKGIPCDVVWMD 218

Query: 326 IEYTNKKMYFTWDVVKFPHPAEMVANLTAKGRKMVVIVDPHIKREPGYFLHEDATELGYY 385
           I+Y +    FT+D  +FP P  MV +L + G K + ++DP IK+E GYF++E  +E   +
Sbjct: 219 IDYMDGFRCFTFDSSRFPDPKSMVDDLHSIGCKAIWMLDPGIKKEEGYFVYETGSENEVW 278

Query: 386 VKDRDGKDYEGWCWPGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVF 445
           ++  DG  + G  WPG   +PDF       +++   +  +F     D  +WNDMNEP+VF
Sbjct: 279 IQKADGSPFIGEVWPGDCVFPDFTCKRTRTWWASLVK--DFISNGVD-GIWNDMNEPAVF 335

Query: 446 NGPEVTMPKDCRHYKPPQDGLEGLAAYWEHRHVHNEYGLWNLRATNTGLLDRADGVYRPF 505
                TMP    H      G + +     H + HN YG+   R+T  G+  +A+   RPF
Sbjct: 336 KSTTKTMPVSNIHR-----GDDDIGGVQNHSYYHNVYGMLMARSTYEGMA-KANTEKRPF 389

Query: 506 LLTRAVFAGTQRYSAVWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAE 565
           +LTRA F G+QRY+A WTGDN + W  L  SVPM L L ++G    G D+GGF      +
Sbjct: 390 VLTRAGFIGSQRYAATWTGDNLSNWEHLHMSVPMVLQLGLSGQPLSGPDIGGFAGNATPK 449

Query: 566 LMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYALLDFWYTLFYEH 625
           L  RW    A  PF R H+   +   EPW +      + R A  +RY LL   YTLFY  
Sbjct: 450 LFGRWMGLGALFPFSRGHTETGSIDHEPWSFGEECEEVCRLALLRRYRLLPHIYTLFYFS 509

Query: 626 TVDGLPVMRPLFQHYPDEPATYPIDDQYLLGDALL-VKPVTTAGASSVEVYLPGDGPWYD 684
            + G PV  P+F   P +P    I+  +LLG  L+    V   GA      LP  G W  
Sbjct: 510 HMKGTPVAAPVFFADPQDPELRKIETSFLLGPLLVCASTVPDKGAHECSHKLP-KGNWLP 568

Query: 685 VDTYVPHKGPRITQPVTISKIPVYQRGGTIVPRRERVRRSSALMADDPFTLVVALDANNS 744
            D    H  P +  PV      ++ +GG I+P    ++       +D  +L+++LD N  
Sbjct: 569 FDFGDSH--PDL--PV------LFLQGGAILPIGRPIKHVGEASLEDDLSLIISLDENGM 618

Query: 745 ARGSLY 750
              S Y
Sbjct: 619 PTHSNY 624


>06_03_1108 -
           27661916-27662812,27662889-27663529,27663613-27664592,
           27664854-27664934,27668582-27668634,27669294-27669308,
           27670069-27670296
          Length = 964

 Score =  270 bits (662), Expect = 3e-72
 Identities = 178/499 (35%), Positives = 246/499 (49%), Gaps = 26/499 (5%)

Query: 291 GYHQCRWNYMDEADVRSVDENFDVHDIPMDSIWLDIEYTNKKMYFTWDVVKFP--HPAEM 348
           G+HQCR+ Y + AD+  V   +    IP++ +W DI+Y +    FT D V FP       
Sbjct: 376 GFHQCRYGYKNVADLEGVVAGYAKARIPLEVMWTDIDYMDAYKDFTLDPVNFPADRMRPF 435

Query: 349 VANLTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKDRDGKDYEGWCWPGSSSYPDF 408
           V  L   G+K VVI+DP I     Y       +   ++K  +G +Y G  WPG+  +PDF
Sbjct: 436 VDRLHRNGQKFVVIIDPGINVNTTYGTFVRGMKQDIFLK-WNGSNYLGVVWPGNVYFPDF 494

Query: 409 FNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLE- 467
            NP  + +++       F  T     LW DMNE S F  P      D   Y+    G+  
Sbjct: 495 LNPRAAEFWA--REIAAFRRTLPVDGLWVDMNEISNFVDPPPLNAIDDPPYRINNSGVRR 552

Query: 468 --------GLAAYW---EHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQ 516
                     A ++        HN +G    RAT+  LL   D   RPF+L+R+ F G+ 
Sbjct: 553 PINNKTVPASAVHYGGVAEYDAHNLFGFLEARATHDALL--RDTGRRPFVLSRSTFVGSG 610

Query: 517 RYSAVWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAF 576
           RY+A WTGDN A W  L  S+   LS  + G    G+D+ GF      EL +RW Q  AF
Sbjct: 611 RYTAHWTGDNAATWEDLHYSINTMLSFGLFGIPMIGADICGFGGNTTEELCSRWIQLGAF 670

Query: 577 QPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYALLDFWYTLFYEHTVDGLPVMRPL 636
            PF R HS I T RRE +L+ +   +  R A   RY LL + YTL YE    G P+ RPL
Sbjct: 671 YPFSRDHSAIGTVRRELYLWESVARS-ARKALGLRYRLLPYLYTLMYEAHTTGAPIARPL 729

Query: 637 FQHYPDEPATYPIDDQYLLGDALLVKPVTTAGASSVEVYLPGDGPW---YDVDTYVPHK- 692
           F  YP +  TY ID Q+LLG  +LV PV   GA++V  Y P  G W   YD    V  K 
Sbjct: 730 FFSYPGDVETYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPA-GRWFSLYDFSLAVATKT 788

Query: 693 GPRITQPVTISKIPVYQRGGTIVPRRERVRRSSALMADDPFTLVVALDANNSARGSLYID 752
           G R+T P     + V+  GG I+  ++    SS  +      L+VAL  + +A G L++D
Sbjct: 789 GKRVTLPAPADTVNVHVAGGNILTLQQPALTSSR-VRQSVVHLLVALADDGTATGDLFLD 847

Query: 753 DGETYEYKNNKYIYAKIEF 771
           DGE+ E    +  +++I+F
Sbjct: 848 DGESPEMAGPRSRWSQIKF 866


>01_01_0195 +
           1697447-1697691,1698150-1698808,1699754-1701570,
           1701700-1701771
          Length = 930

 Score =  169 bits (411), Expect = 8e-42
 Identities = 115/351 (32%), Positives = 167/351 (47%), Gaps = 18/351 (5%)

Query: 477 HVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTAEWSFLAAS 536
           + H+ YG     AT+  L     G  RPF+LTR+ F G+  Y+A WTGDN   W  L  S
Sbjct: 526 NAHSLYGFSQAIATHQAL-QGLQGK-RPFILTRSTFVGSGAYAAHWTGDNKGTWENLRYS 583

Query: 537 VPMCLSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLY 596
           +   L+  I G    G+D+ GF+  P  EL  RW +  AF PF R H++  + R+E +++
Sbjct: 584 ISTMLNFGIFGMPMVGADICGFYPQPTEELCNRWIELGAFYPFSRDHANFASPRQELYVW 643

Query: 597 PAATTALIRDANRKRYALLDFWYTLFYEHTVDGLPVMRPLFQHYPDEPATYPIDDQYLLG 656
            +   +  R+A   RY LL + YTL Y+  + G PV RP+F  +PD    Y +  QYLLG
Sbjct: 644 ESVAKS-ARNALGMRYRLLPYLYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYLLG 702

Query: 657 DALLVKPVTTAGASSVEVYLPGDGPWY---DVDTYVPHKGP-RITQPVTISKIPVYQRGG 712
            +++V PV   GA+SV    P  G WY   D    V  +G   +     +++I V+    
Sbjct: 703 ASVMVSPVLEQGATSVSAMFP-PGSWYNLFDTTKVVVSRGEGAVKLDAPLNEINVHVFQN 761

Query: 713 TIVPRRERVRRSSALMADDPFTLVVALD---ANNSARGSLYIDDGETYE--YKNNKYIYA 767
           TI+P +     S    A  PFTLVVA         A G++Y+DD E  E      +  Y 
Sbjct: 762 TILPMQRGGTISKEARA-TPFTLVVAFPFGATEAEAEGAVYVDDDERPEMVLAEGQATYV 820

Query: 768 KIEFGPDEMTYTLASE----GAQYPTGAWLERVVVAGIRAAPRSARLQQDG 814
           +          T+ SE          G  +E++ V G+    R   +  DG
Sbjct: 821 RFYATVRGKAVTVRSEVELGSYSLQKGLLIEKLSVLGLEGTGRDLAVHVDG 871



 Score =  121 bits (291), Expect = 3e-27
 Identities = 85/297 (28%), Positives = 138/297 (46%), Gaps = 31/297 (10%)

Query: 154 VYGIPEHTDGLALKTTTSGDPYRLYNLDVFEYILDSRMAIYGSVPVMYAHGPKRTVGVFW 213
           +YG+ E+T    ++   + DPY +Y  D+    L++ +  YGS PV              
Sbjct: 185 LYGLGENTQPGGIRLRPN-DPYTIYTTDISAINLNTDL--YGSHPV-------------- 227

Query: 214 HNSAETWIDVVNYGEGNVVSSLVNLVTGGQK---KRVDARFLSESGIVDMFVLMGSTPGD 270
                 ++D+ + G   V  +++ L + G     +     +    G++D ++  G TP  
Sbjct: 228 ------YVDLRSRGGHGVAHAVLLLNSNGMDVFYRGTSLTYKVIGGLLDFYLFSGPTPLA 281

Query: 271 AFRQYTALTGTTPLPPKFSLGYHQCRWNYMDEADVRSVDENFDVHDIPMDSIWLDIEYTN 330
              QYT++ G     P ++ G+HQCRW Y + + V  V E +    IP+D IW D ++ +
Sbjct: 282 VVDQYTSMIGRPAPMPYWAFGFHQCRWGYKNLSVVEGVVEGYRNAQIPLDVIWNDDDHMD 341

Query: 331 KKMYFTWDVVKFPHP--AEMVANLTAKGRKMVVIVDPHIKREPGYFLHEDATELGYYVKD 388
               FT D V +P P   E +  + A+G K +V++DP I     Y +++   +   ++K 
Sbjct: 342 AAKDFTLDPVNYPRPKLLEFLDKIHAQGMKYIVLIDPGIAVNNTYGVYQRGMQGDVFIK- 400

Query: 389 RDGKDYEGWCWPGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVF 445
            DGK Y    WPG   +PDF NP    ++ D  R   F        LW DMNE S F
Sbjct: 401 LDGKPYLAQVWPGPVYFPDFLNPNGVSWWIDEVR--RFHDLVPVDGLWIDMNEASNF 455


>07_03_0108 +
           13481249-13481464,13484556-13484693,13485320-13485388,
           13485462-13485599,13485685-13485802,13486265-13486347,
           13486921-13487013,13487801-13487969,13488056-13488129,
           13488448-13488633,13490009-13490101,13490469-13490534,
           13490618-13490785,13491199-13491319,13492072-13492141,
           13492389-13492476,13492565-13492685,13492964-13493157,
           13493239-13493347,13493488-13493643,13493858-13493957,
           13494115-13494288,13494549-13494694,13494796-13494860,
           13495013-13495018
          Length = 986

 Score =  113 bits (272), Expect = 6e-25
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 266 STPGDAFRQYTALTGTTPLPPKFSLGYHQCRWNYMDEADVRSVDENFDVHDIPMDSIWLD 325
           +TP +     +   GT  +PPK+SLGYHQCR++Y     V  V + F    IP D +W+D
Sbjct: 213 NTPSEVTTSLSHAIGTVSMPPKWSLGYHQCRYSYDSSEKVLQVVKTFRERGIPCDVVWMD 272

Query: 326 IEYTNKKMYFTWDVVKFPHPAEMVANLTAKGRKMVVIVDPHIKREPGYFLHEDATELGYY 385
           I+Y +    FT+   +FP P  MV +L + G K + ++DP IK E GYF+ +   E   +
Sbjct: 273 IDYMDGFRCFTFS-HRFPDPKCMVDDLHSVGCKAIWMLDPGIKNESGYFVFDSGLESDVW 331

Query: 386 VKDRDGKDYEGWCWPGSSSYPDF 408
           V+  D + + G  WPG   +PDF
Sbjct: 332 VQKEDKQPFVGEVWPGDCVFPDF 354



 Score =  108 bits (260), Expect = 2e-23
 Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 12/226 (5%)

Query: 541 LSLAIAGNSFCGSDVGGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAAT 600
           + L ++G  F G D+GGF      +L  RW    A  PF R HS   +   EPW +    
Sbjct: 479 VDLGLSGQPFAGPDIGGFAGNATPKLFGRWMGVGALFPFSRGHSDKGSLDHEPWSFGEEC 538

Query: 601 TALIRDANRKRYALLDFWYTLFYEHTVDGLPVMRPLFQHYPDEPATYPIDDQYLLGDALL 660
             + R A  +RY LL   YTLFY    +G PV  P++   P +     I+  +LLG  L+
Sbjct: 539 EEVCRLALLRRYRLLPHIYTLFYLSHTNGTPVAAPVYFADPQDLELRKIETSFLLGSLLV 598

Query: 661 -VKPVTTAGASSVEVYLPGDGPWYDVDTYVPHKGPRITQPVTISKIPVYQRGGTIVPRRE 719
                   GA      LP  G W   D    H  P +          +Y RGG ++P   
Sbjct: 599 CASTCPDKGAHESSQKLP-KGIWLPFDFGDSH--PDLPM--------MYLRGGAVLPIGL 647

Query: 720 RVRRSSALMADDPFTLVVALDANNSARGSLYIDDGETYEYKNNKYI 765
            +        DD  +L++ALD N  A G L+ DDG+ YE+    Y+
Sbjct: 648 PLNHVGEAKLDDNLSLIIALDENGKAEGVLFEDDGDGYEFLQGNYL 693



 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 482 YGLWNLRATNTGLLDRADGVYRPFLLTRAVFAGTQRYSAVWTGDNTAEWSFLAASVPMCL 541
           YG+   ++T  G+   A+   RPF+LTRA F G QRY+A+WTGDN + W  L  S+ M L
Sbjct: 368 YGMLMAKSTYEGM-KLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMSIAMVL 426

Query: 542 SLAIAGNS 549
            L    NS
Sbjct: 427 QLDFELNS 434


>01_01_1161 +
           9244628-9245748,9247696-9247828,9248233-9248448,
           9249802-9249957,9250788-9250979,9251118-9251234,
           9251822-9252193
          Length = 768

 Score = 56.4 bits (130), Expect = 9e-08
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 565 ELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYALLDFWYTLFYE 624
           EL+ RW + +AF   FR H   +      +     T A       K Y   +F+     E
Sbjct: 587 ELLLRWLELSAFTVVFRTHEGNKPGSNCQFYSNNRTLAHFARC-AKIYKAWEFYRIQLVE 645

Query: 625 HTVD-GLPVMRPLFQHYPDEPATYPID-DQYLLGDALLVKPVTTAGASSVEVYLP-GDG 680
              + GLPV R LF HYP++     +   Q+L+G  +LV PV   G S+V  Y P  DG
Sbjct: 646 EAAEKGLPVARHLFLHYPEDQRVQKMTYQQFLVGTEMLVVPVLDKGRSTVTAYFPMSDG 704



 Score = 32.3 bits (70), Expect = 1.7
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 262 VLMGSTPGDAFRQYTALTGTTPLPPKFSLGYHQCRWNYMDEADVRSVDENFDVHDIPMDS 321
           +L G +P +    YT  TG  P  P++             +A VR V +    HD+P+ +
Sbjct: 428 ILHGGSPTELITSYTESTGRPPALPRWITSGAVVGMQGGTDA-VRRVWKQLQDHDVPVSA 486

Query: 322 IWLDIEYTNKK------MYFTWDVVKFPHPA--EMVANLTAKGRKMVVIVDP 365
            WL      +K      +++ W+V    +    ++V +L  +G + +   +P
Sbjct: 487 FWLQDWVGQRKTSIGSQLWWNWEVDDDHYAGWNDLVRDLRRRGVRTMTYCNP 538


>01_01_0796 + 6190931-6192745
          Length = 604

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 16/152 (10%)

Query: 631 PVMRPLFQ-HYPDEPATYPIDDQYLLGD-ALLVKPVTTAGASSVEVYLPGDGPWYDVDTY 688
           P+  P+ + H P +     + + +L  D A ++ P  T     VE ++P + PW      
Sbjct: 366 PLQMPVAETHLPLQVQAPFMQEPFLFSDQAPVLAPPPTPLQMPVEAHMPLEAPWIQEPFL 425

Query: 689 VPHKGPRITQPVTISKIPVYQRGGTIVPRRERVRRSSALMADD-------PFTLVVALDA 741
           +P + P    P T   +PV   G    P    + + S +MAD        P  L + L+A
Sbjct: 426 MPDQAPVHAPPPTPLLMPV---GADHFPLEAPLFQESLIMADQKSVHALPPPPLQMPLEA 482

Query: 742 NNSARGSLYIDD----GETYEYKNNKYIYAKI 769
           +       Y  D     +  EY+N  Y++  +
Sbjct: 483 HLPPAAQEYNQDLAVQQQPQEYENYDYMFENV 514


>05_05_0136 -
           22631260-22631325,22631735-22631821,22631898-22632026,
           22632122-22632190,22632271-22632351,22632598-22632702,
           22632786-22633016,22633098-22634272,22634391-22634457,
           22636705-22637778,22638119-22638274,22638827-22638985,
           22639062-22639220,22639306-22639422,22639502-22639612,
           22639690-22640358
          Length = 1484

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 516 QRYSAVWTGDNTAEWSFLAASVPMCLSLAIAGNSFCGSDVGGFF 559
           QR  A    D   E + +AA   +C +L     SFCG DVGG+F
Sbjct: 110 QRMVAAVAADGAEEGAVVAALTELCEAL-----SFCGEDVGGYF 148


>06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423
          Length = 209

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 76  EFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTW 124
           E +++   +  +L++    L E    +    E+EDG+GAN  ++EEG W
Sbjct: 151 ESMERGSRILAILDK----LKEEREQQEGNEEEEDGEGANLSEEEEGDW 195


>11_06_0313 + 22306497-22308938
          Length = 813

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 509 RAVFAGTQRYSAVW-TGDN---TAEWSFLAASVPMC--LSLAIAGNSFCGSDVGGFFKYP 562
           R V  G+Q +  V+ TGD       W  + A   +C      I  NS  G D    F+ P
Sbjct: 633 RVVQKGSQIHFEVFKTGDRGWGLRSWDPIRAGTFICEYAGEVIDRNSIIGED-DYIFETP 691

Query: 563 EAELMTRWYQAAAFQPFFRAHSHIETKRREPWLYPAATTALIRDANRKRYALLDFWYTLF 622
            +E   RW  A             ET ++ P +  A  T  I        +   FW  + 
Sbjct: 692 SSEQNLRWNYAPELLGEPSLSDSSETPKQLPIIISAKRTGNIARFMNHSCSPNVFWQPVL 751

Query: 623 YEHTVDGLP 631
           Y+H  +G P
Sbjct: 752 YDHGDEGYP 760


>04_02_0026 +
           8708765-8710935,8711021-8711272,8711353-8711463,
           8711553-8711634,8711909-8712100
          Length = 935

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 694 PRITQPVT-ISKIPVYQRGGTIVPRRERVRRSSALMADDPFTLVVALDANNSARGSLYID 752
           P I +  T + +I   +R G +VPRRER + ++AL   +    V  L +  S +   +  
Sbjct: 239 PNIEEVTTNLQQIVEKERSGQLVPRRERDQHTAALGTAEHSGRVRGLSSKTSWKVG-FPQ 297

Query: 753 DGETYEYKNNKY---IYAKIEFGPDEMTYTLASE 783
           D   Y+ K +KY   +  KI     E  Y+LA+E
Sbjct: 298 DAPNYK-KRDKYKEQLSDKIYAQVKEHFYSLAAE 330


>04_01_0171 - 1927238-1928728,1928819-1929016
          Length = 562

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 618 WYTLFYEHTVDGLPVMRPLFQHYPDEPATYPIDDQYLL-GDALLVKPVTTAGASSVEVYL 676
           W T   +HT      +R    +         I+ ++   G  LLV P+     S   V+ 
Sbjct: 236 WDTFVADHTTAEALALRKKMSYAGHVDQWREIEQRFAAAGKPLLVDPMVER--SKNWVWA 293

Query: 677 PGDGPWYDVDTYVPHKGPRITQPVT-ISKIPVYQRGGTIVPRRERVRRSSALMADDPFTL 735
              G   D +  +  + P I +  T + +I   +R G  VPRRER + ++AL   +    
Sbjct: 294 RSTGQVSD-EGDILFETPDIEEVTTNLQQIVEKERSGQFVPRRERDQLTAALGTAEHSGR 352

Query: 736 VVALDANNSARGSLYIDDGETYEYKNNKY---IYAKIEFGPDEMTYTLASE 783
           V  L +  S +   +  D  +Y+ K +KY   +  KI     E  Y+LA+E
Sbjct: 353 VRGLSSKTSWKVG-FPQDAPSYK-KRDKYKEQLSDKIYAQVKEHFYSLAAE 401


>02_05_0908 +
           32668706-32669140,32669772-32669957,32670316-32670414,
           32671010-32671147,32672276-32672533,32675009-32675272,
           32675426-32675571,32675762-32675839,32676746-32676875,
           32677040-32677286,32677374-32677423,32677767-32677869,
           32678332-32678354
          Length = 718

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 671 SVEVYLPGDGPWYDVDTYVPHKGPRITQPVT 701
           S  + +P     Y+ DT+VPH GP   QP T
Sbjct: 25  STSMCIPVRDDEYEEDTFVPHTGPLFVQPPT 55


>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
            21500187-21500418,21500488-21500668,21501342-21501438,
            21501641-21501779,21502024-21502351,21502890-21503137,
            21503270-21503543,21504200-21504291,21504451-21504521,
            21505091-21505181,21506526-21507380,21507482-21507594,
            21508007-21508074,21508655-21508835,21509084-21509186,
            21509273-21509379,21510046-21511584,21511661-21511771,
            21511856-21511908,21511988-21512063,21512147-21512366,
            21512477-21512901,21513193-21513372,21513503-21515474
          Length = 2680

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 44   DGLKLISKDDGKVILVNTQGHKVIITSEPLKLEFLDQNGEVAVVLNENSQLLVEPLRARR 103
            + L L++K     I +NT G +++   + LK+EF+DQ+  V VV +        P R  R
Sbjct: 2070 EALWLLTKSSLLTISLNTSG-RMVGGFDKLKVEFIDQDESVQVVADTIRSSGEIPERYAR 2128

Query: 104  EKVEDE----DGDGAN 115
             ++E +    D DG N
Sbjct: 2129 PEMEADPVIIDTDGYN 2144


>08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271
          Length = 450

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 5/63 (7%)

Query: 49  ISKDDGKVILVNTQGHKVIITSE-PLKLEFLDQNGEVAVVLNENSQLLVEPLRARREKVE 107
           +S DD +++L++++G KV++TS+  +KL        V+V  N   ++ V+  +A    VE
Sbjct: 351 MSIDDERIVLLDSRGEKVVVTSDGNIKL----SRRVVSVESNTELKVSVKAWKADNNVVE 406

Query: 108 DED 110
           +E+
Sbjct: 407 NEN 409


>02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665
          Length = 244

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 639 HYPDEPA----TYPI---DDQYLLGDALLVKPVTTAGASSVEVYLPGDGPWYDVDTYVPH 691
           HYPD PA     +P+   DD+Y         P  +   + +E +   D P  +V     H
Sbjct: 125 HYPDVPAWIGVVHPLHVADDEYGSASTHHGVPAYSPRTAFIEDFFSTDPPQGEVGMDYWH 184

Query: 692 KGPRITQP 699
             P++TQP
Sbjct: 185 AAPQVTQP 192


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.319    0.137    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,939,283
Number of Sequences: 37544
Number of extensions: 1327396
Number of successful extensions: 2914
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2867
Number of HSP's gapped (non-prelim): 31
length of query: 849
length of database: 14,793,348
effective HSP length: 88
effective length of query: 761
effective length of database: 11,489,476
effective search space: 8743491236
effective search space used: 8743491236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)

- SilkBase 1999-2023 -