Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000131-TA|BGIBMGA000131-PA|IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding, IPR010978|tRNA-binding arm,
IPR001412|Aminoacyl-tRNA synthetase, class I, IPR002303|Valyl-tRNA
synthetase, class Ia, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR013155|tRNA synthetase, valyl/leucyl, anticodon-binding
(989 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 658 0.0
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 526 e-150
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 108 4e-24
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 91 9e-19
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 72 5e-13
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 46 3e-05
SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb... 45 5e-05
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 34 0.085
SPAC23A1.12c |||phenylalanine-tRNA ligase beta subunit |Schizosa... 33 0.15
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 33 0.20
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.60
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 31 0.79
SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces... 31 0.79
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 31 0.79
SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha su... 30 1.4
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 30 1.8
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 30 1.8
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 29 2.4
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 29 2.4
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 29 4.2
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 29 4.2
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 28 5.6
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 28 5.6
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 28 7.3
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 27 9.7
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 9.7
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 27 9.7
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 27 9.7
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 27 9.7
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 658 bits (1626), Expect = 0.0
Identities = 360/905 (39%), Positives = 528/905 (58%), Gaps = 44/905 (4%)
Query: 36 AYRPEIVEKNKYDKWENAGLFEAE-----NCSNKNNFSIILPPPNVTGKLHLGHALACTI 90
+Y P+ VE YD W +G FE E + F I PPPNVTG LH+GHAL I
Sbjct: 96 SYNPKAVESAWYDWWVKSGFFEPEFGPDGKPKKEGVFVITSPPPNVTGALHIGHALTIAI 155
Query: 91 QDVIVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYLKSKENINRYDIGREKFVEEVWKWR 150
QD + R R LG VL+L G DHAG++TQS+VEK L + R+D R+KFV+ VW+W+
Sbjct: 156 QDSLARWNRMLGKTVLFLGGFDHAGLSTQSVVEKKLWYTQKKTRHDYPRDKFVDIVWEWK 215
Query: 151 EKHGDSITEQLRTLGCSLDWSRQVFTMDPKHTKAVNTAFIQLFHKNLIYRKKALVNWCNA 210
E++ + I Q+ LG S DW+R+ FTMD ++AV F++L +N+IYR LVNWC A
Sbjct: 216 EEYHNRIKNQMSRLGGSFDWTREAFTMDENLSRAVVETFVRLHEENIIYRANRLVNWCTA 275
Query: 211 LKSTVSDIEVENVPINEPSDLSLPNYIKPVRFGLIYDFAYKVYDSTEEIIVSTTMPETML 270
L++T+S++EVENV + + L +P Y +PV G++ AY V S E I+++TT PET+L
Sbjct: 276 LQTTLSNLEVENVDVPGRTLLKVPGYDEPVEVGVLTSIAYAVEGSDERIVIATTRPETLL 335
Query: 271 GDVAVAVHPEDKRYQHLEGKRVIHPFRTNETIPIIFDKF-VDREFGTGAVKITPAHSKVD 329
GD AVAVHP+D RY+HL GK V HPF N +IPII D VD EFGTGAVKITPAH D
Sbjct: 336 GDTAVAVHPQDPRYKHLHGKFVKHPF-CNRSIPIICDDIIVDMEFGTGAVKITPAHDPND 394
Query: 330 YEVAKQHNLPLLQVINVEGLI-ENTEIFQGLKRYDCRSILVHKLDDLGLMKEIKPHIMTL 388
YEV K+HNL + + +GL+ EN F G+KR+ R +V +L +LGL K + M +
Sbjct: 395 YEVGKRHNLEFINIFTDDGLLNENCGEFAGMKRFTARVKVVERLKELGLFVGTKENPMVI 454
Query: 389 PICSRSGNVIDHLPKEQWFLSCAELNKKARECVENRKLKIIPENFIQNWFNWTDDGRDWC 448
P+C ++ ++I+ + K QW+++ E+ A E V++ +++I P+ + + W ++ +DWC
Sbjct: 455 PLCGKTSDIIEPVMKPQWWVNQKEMAAAAAEVVKSGEIEIAPDMSRREFIRWMENIQDWC 514
Query: 449 ISRQLWWGHQIPAYMCSVDEELT--------WVAATDESSAKQQASKHFNTLPDLIKVER 500
ISRQLWWGH+IPAY ++ +E + WV A+++A F +E+
Sbjct: 515 ISRQLWWGHRIPAYFVNLADEPSQDRSEGRYWVTGRTLEQAEEKAKAAFP--GKSFTLEQ 572
Query: 501 DTDVLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILGFWVHRMVILGLEL 560
D DVLDTWFSSG++PF+ LGWP + DY FYP +L+ TG DIL FW+ RMV+LGL+L
Sbjct: 573 DEDVLDTWFSSGLWPFSTLGWPKD--TSDYENFYPTTLMETGWDILFFWIARMVMLGLKL 630
Query: 561 TGKVPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALKKKSEEMHKSGILNK 620
TGK+PF++V H +V D +G KMSKS GNV+DPIDVIEGISL AL K G L+
Sbjct: 631 TGKIPFKRVFCHALVRDAQGRKMSKSLGNVVDPIDVIEGISLQALHDKL----LVGNLDS 686
Query: 621 DELKKAYSYHKANFSATNGIPECGVDALRFTLLSQDIKSHFVNFDVSYCHSNKLFCNKIW 680
E++KA + ++ GIP+CG DALRFTL S +N D+ + FCNK++
Sbjct: 687 REVEKAKKGQRLSY--PKGIPQCGTDALRFTLCSLTTGGRDLNLDILRVEGYRKFCNKLY 744
Query: 681 QSIKYT--QLSYAKLKVIDSEITKQDLTFFDRWILSRLANMVQKVNDTMDSYDFQVATKA 738
+ K+ +L + +++T + + ++WI RL +N M+ +F AT A
Sbjct: 745 NATKFALGRLGSNFVPNKTADLTGNE-SLVEKWIFHRLNIAAAAMNKNMEEMNFLQATSA 803
Query: 739 IRTLIYNEFCDIYLEASKPGFENDNVRIGYAHA-HTLSAVLNTSLRCLYPFMVYITQEL- 796
+ E CD+Y+E SK +D + A TL VL+ +LR ++PFM Y+T+E+
Sbjct: 804 VHQFWLYELCDVYIENSK-YLLSDGTEVQQESAKQTLYTVLDNALRLMHPFMPYVTEEMW 862
Query: 797 --IPTIPDFERNVIINFKDASEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRELKG 854
+P P + I+ +FP + V++ NEI + E I+ V+ R +
Sbjct: 863 QRLPRRPGDKTQTIVK--------AAFP--VERVDYSNEIAAKYYESIITVVHSTRSMMA 912
Query: 855 LYSITNKVRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNT 914
I + I+ ++ LI + ++ + + + N D VK + +
Sbjct: 913 ENGIKSDAVVYIHPDEEHSKLITSESASIQSLIKKCKTLSIVDNTFDSDKCVKNEVLEGS 972
Query: 915 EIYVE 919
I++E
Sbjct: 973 TIFLE 977
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 526 bits (1299), Expect = e-150
Identities = 323/928 (34%), Positives = 507/928 (54%), Gaps = 54/928 (5%)
Query: 67 FSIILPPPNVTGKLHLGHALACTIQDVIVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYL 126
F I+LPPPN+TGKLH+GHAL TIQD + R GY V + PGTDHAGIATQS+VEKYL
Sbjct: 60 FPILLPPPNITGKLHIGHALTITIQDALARFYAMHGYKVSFRPGTDHAGIATQSVVEKYL 119
Query: 127 KSKENINRYDIGREKFVEEVWKWREKHGDSITEQLRTLGCSLDWSRQVFTMDPKHTKAVN 186
+ K+ + R + +++ + + W+ K+ SI QL++ DW +TMD ++AVN
Sbjct: 120 Q-KKGVYRNQLSKDELLSSIHSWQVKYQKSIINQLKSFEAIFDWDNIFYTMDQNRSEAVN 178
Query: 187 TAFIQLFHKNLIYRKKALVNWCNALKSTVSDIEVENVPINEPSDLSLPNYIKPVRFGLIY 246
AFI LF+ LIYR VNWC L+S VSDIEVE+ IN+P + N PV FG +Y
Sbjct: 179 EAFISLFNAGLIYRANRFVNWCPKLESAVSDIEVESQQINKPVTKYVDN--TPVEFGWLY 236
Query: 247 DFAYKVYDS-TEEIIVSTTMPETMLGDVAVAVHPEDKRYQHLEGKRVIHPFRTNETIPII 305
+ +Y++ S E++ VSTT PET+ GD A+AV P D+RY+ G+ V HP + IP+I
Sbjct: 237 EISYQLEGSDNEQLNVSTTRPETIFGDRAIAVSPHDERYKKYVGRFVKHPLIDDLLIPVI 296
Query: 306 FDKFVDREFGTGAVKITPAHSKVDYEVAKQHNLPLLQVINVEG-LIENTEIFQGLKRYDC 364
D VDR FGTG +KITP HS VDYE+AK+HN+ + +++ G LI ++ G+ R
Sbjct: 297 CDNAVDRHFGTGVLKITPMHSIVDYEIAKRHNIDCVSIMDKSGNLINCSKEVNGMNRLKA 356
Query: 365 RSILVHKLDDLGLMKEIKPHIMTLPICSRSGNVIDHLPKEQWFLSCAELNKKARECVENR 424
RS +V L + E PH + L +CSR+G+VI+ + QW+LS L K+ + +
Sbjct: 357 RSKIVRLLQQRNRLVEQVPHSLILSVCSRTGDVIEPVMVPQWYLSVDSLKKEVLK--SSN 414
Query: 425 KLKIIPENFIQNWFNWTDDGRDWCISRQLWWGHQIPAYMCSVDEELTWVAATDESSAKQQ 484
KLK++P + W +W DWCISRQ+WWGHQIP + + EE W+AA + A Q
Sbjct: 415 KLKLVPSLARKEWDSWFKKMGDWCISRQIWWGHQIPVW--KILEEDKWIAAPNYEKALQL 472
Query: 485 ASKHFNTLPDLIKVERDTDVLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHD 544
+ V +D+DVLDTWFSS + P +A GWP S+D PL + +G D
Sbjct: 473 SVGK--------SVSQDSDVLDTWFSSALLPLSAFGWPK---SKD---IQPLPFIESGQD 518
Query: 545 ILGFWVHRMVILGLELTGKVPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDA 604
IL FW+ RM +L + ++PF++++LH +V D++G KMSKS GNVIDP+D+I G++L+
Sbjct: 519 ILFFWIARMALLCKYFSNELPFKEIILHPLVRDSEGRKMSKSLGNVIDPMDIINGVTLEN 578
Query: 605 LKKKSEEMHKSGILNKDELKKAYSYHKANFSATNGIPECGVDALRFTLLSQDIKSHFVNF 664
+KK E G L E+ K+ + F NGIP G+D R+ L +
Sbjct: 579 MKKALLE----GNLPISEVHKSSKQMEKAF--PNGIPAQGIDIFRYGLFLCLHHEQRILL 632
Query: 665 DVSYCHSNKLFCNKIWQSIKYTQLSYAK---LKVIDSEITKQDLTFFDRWILSRLANMVQ 721
D++ F +K+W +Y K LK+ DS+ +Q ++ S+L + V+
Sbjct: 633 DMNSFSDAHRFVSKLWNLARYFNQYKDKENPLKLTDSQ--RQRISLLKMATYSKLHHAVE 690
Query: 722 KVNDTMDSYDFQVATKAIRTLIYNEFCDIYLEASKPGFE-NDNVRIGYAHAHTLSAVLNT 780
V ++ + F A ++ + N+ +Y+E ++ F+ D+ Y S +L+
Sbjct: 691 GVKESFEQRKFFNAADIMKNFLLNDLSSVYVELTR--FDVKDSKSSAYEVYRVFSDILHI 748
Query: 781 SLRCLYPFMVYITQELIPTIPDFERNVIINFKDASEKFLSFPKTEDYVEWKNEIIEEQAE 840
L+ ++P + I+ ++ + II + SE FLSFP ++ + + QAE
Sbjct: 749 FLKLIHPIVPCISGVML-------HSKIIPERKNSE-FLSFPTSQQECLL---VHDNQAE 797
Query: 841 KIL-NAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNG 899
++ NA +++ +L+ L S NK P +E +K D I T K + +
Sbjct: 798 VVVQNAYDVLIQLRKLESPLNK-SPSREHTVYISTSLEPLKYFYDAIEQSTNLKLKSISQ 856
Query: 900 KDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNY 959
+D ++ + + I + + + + + KL K + L+ L+ ++ S+S Y
Sbjct: 857 EDTIDLMRNQTFILSRISSDTILLVPKKLYPSKRKKLRKNLDDLQKKLDKIQHTTSSSGY 916
Query: 960 LTTIPEWTQVRDHE---KLMAKRKELKE 984
P + ++++ E ++ K +++K+
Sbjct: 917 -EKAPSYIKLKNCELQKDILVKIQDIKQ 943
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 108 bits (259), Expect = 4e-24
Identities = 86/321 (26%), Positives = 140/321 (43%), Gaps = 30/321 (9%)
Query: 309 FVDREFGTGAVKITPAHSKVDYEVA-------KQHNLPLLQVINVEGLIENTEI--FQGL 359
+V+ GTG V PA + DY+ A H P ++ +GL+ +EI F G
Sbjct: 308 YVEEGSGTGIVHQAPAFGEADYDAAWAAGIIDADHQPPC--PVDEQGLL-TSEITDFAGQ 364
Query: 360 KRYDCRSILVHKLDDLGLMKEIKPHIMTLPICSRSGNVIDHLPKEQWFLSCAELNKKARE 419
D ++ L G + + + P C RS + + WF+ E+ E
Sbjct: 365 YVKDADKEIIRSLKASGHLVKHSQIFHSYPFCWRSDTPLIYRAVPSWFVRVKEITN---E 421
Query: 420 CVEN-RKLKIIPENFIQNWF-NWTDDGRDWCISRQLWWGHQIPAYMCSVDEELTWVAATD 477
VEN +P+N F NW + RDW ISR +WG IP ++ EE+ + +
Sbjct: 422 MVENVMSTHWVPQNIRDKRFANWLKNARDWNISRNRYWGTPIPLWVSDDYEEVVCIGSIK 481
Query: 478 E----SSAKQQASKHFNTLPDLI--------KVERDTDVLDTWFSSGIYPFAALGWPDHD 525
E S H +++ + + R ++V D WF SG P+A+ +P +
Sbjct: 482 ELEELSGVSNITDIHRDSIDHITIPSKKGKGTLHRVSEVFDCWFESGSMPYASRHYP-FE 540
Query: 526 FSRDYTEFYPLSLLATGHDILGFWVHRMVILGLELTGKVPFEKVLLHGIVCDNKGAKMSK 585
++ +P ++ G D W + + +LG L K P++ V++ G+V G KMSK
Sbjct: 541 RIEEFKHGFPADFISEGVDQTRGWFYTLTVLGTLLFDKAPYKNVIVSGLVMAEDGKKMSK 600
Query: 586 SRGNVIDPIDVIEGISLDALK 606
N +P +IE DAL+
Sbjct: 601 RLKNYPEPNLIIEKYGSDALR 621
Score = 62.1 bits (144), Expect = 4e-10
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 73 PPNVTGKLHLGHALACTIQDVIVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYLKSKENI 132
PP TG+ H GH LA TI+D + R GY+V G D G+ + ++K L +
Sbjct: 41 PPFATGRPHHGHLLASTIKDSVTRYACLKGYHVERRFGWDTHGLPVEHEIDKKLGITGSD 100
Query: 133 NRYDIGREKFVEEVWKWREKHGDSITEQLRTLGCSLDWSRQVFTMDPKHTKAVNTAFIQL 192
+ +G +K+ E K + + LG +D+ T+ P ++V F +L
Sbjct: 101 DVMAMGIDKYNAECRKIVMTYASEWRATVERLGRWIDFDNDYKTLYPSFMESVWWVFKEL 160
Query: 193 FHKNLIYRKKALVNWCNALKSTVSDIEVENVPINEPSDLSLPNYIKPVRFGLIYDFAYKV 252
K +YR ++ + A + +S+ E + NY K V I +
Sbjct: 161 HTKGKVYRGYRVMPYSTACTTPLSNFEAQQ------------NY-KEVPDPAIVVAFQSI 207
Query: 253 YDSTEEIIVSTTMPETMLGDVAVAVHPE 280
D + TT P T+ ++A+AVHP+
Sbjct: 208 SDPEVSFLAWTTTPWTLPSNLALAVHPD 235
Score = 50.8 bits (116), Expect = 9e-07
Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 24/354 (6%)
Query: 565 PFEKV--LLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALKKKSEEMHKSGILNKDE 622
PFE++ HG D + ++RG + V+ + D K + + SG++ ++
Sbjct: 538 PFERIEEFKHGFPADFISEGVDQTRGWFYT-LTVLGTLLFD--KAPYKNVIVSGLVMAED 594
Query: 623 LKKAYSYHKANFSATNGIPE-CGVDALRFTLLSQDI-KSHFVNFDVSYCHSNKL-FCNKI 679
KK S N+ N I E G DALR L++ + ++ + F
Sbjct: 595 GKKM-SKRLKNYPEPNLIIEKYGSDALRLYLINSPVVRAEILKFKEDGVREVVTRVLIPW 653
Query: 680 WQSIKYTQLSYAKLK-------VIDSEITKQDLTFFDRWILSRLANMVQKVNDTMDSYDF 732
W S K+ + A K V D T DRWIL+R +++ V++ M Y
Sbjct: 654 WNSYKFFEAQAALYKKVTGKDFVFDDAATLSS-NVMDRWILARCQSLIGFVDEEMKQYRL 712
Query: 733 QVATKAIRTLIYNEFCDIYLEASKPGFENDNVRIGYAHA-HTLSAVLNTSLRCLYPFMVY 791
+ LI E + Y+ ++ + ++ I +A + L VL T +R + PF +
Sbjct: 713 YTVVPQLLGLI-EEMTNWYIRFNRRRLKGEDGEIETINALNVLFEVLFTLVRIMGPFTPF 771
Query: 792 ITQELIPTIPDFERNVIINFKDASEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRE 851
IT+ + + ++ S FL FP + E +E + + +++ + L R
Sbjct: 772 ITENIYQHLRNYMPIDKNEISLRSVHFLPFPTYKS--ELDDETVLRRVKRMQTIIELARY 829
Query: 852 LKGLYSITNK--VRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDK 903
++ +I+ K ++ +I + T NE +E K I + + F ++K
Sbjct: 830 VREQNNISLKTPLKTLIVILT-NEEYLEDAKLLERYIAEELNVREVVFTSNEEK 882
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 90.6 bits (215), Expect = 9e-19
Identities = 99/405 (24%), Positives = 161/405 (39%), Gaps = 42/405 (10%)
Query: 224 PINEPSDLSLPNYIKPVRFGLIYDFAYKVYDSTEEIIVSTTMPETMLGDVAVAVHPEDKR 283
P PS+L+L +Y + +GL Y +Y ++ ++ + + M G +A P D
Sbjct: 265 PWTIPSNLAL-SYHPEINYGL-YQHNNSIYLMSDNLVPNL---DFMQGAKRLASCPSDI- 318
Query: 284 YQHLEGKRVIHPFRTNETIPIIFDKFVDREFGTGAVKITPAHSKVDYEVAKQHNLPLLQV 343
+ +P ++ P + +V + GTG V + P H DY + ++NL
Sbjct: 319 ---ISSFTYENPLLPKQSFPFLQSNYVTNDIGTGIVHVAPGHGMEDYLLGLENNLRPFSP 375
Query: 344 INVEGLIENTEI---FQGLKRY-DCRSILVHKLDDLGLMKEIKPHIMTLPICSRSGNVID 399
++ G + +GL+ D ++ + + ++ ++ P+ P R+ +
Sbjct: 376 LDDYGRYTKEALDGSLEGLEVLGDGGKKVISIMKNQNMIVKVSPYKHRYPYDWRTHKPLI 435
Query: 400 HLPKEQWFLSCAELNKKARECVENRKLKIIPENFIQNWFNWTDDGRDWCISRQLWWGHQI 459
QWF+S K A + +++ +K+IP N + + +WCISRQ WG I
Sbjct: 436 LRATPQWFISLENERKTAIKALDS--VKMIPPNSRARLLGFLNGRPEWCISRQRAWGLPI 493
Query: 460 PA-YMCSVDEELTWVAATD---ESSAKQQASKHFNTL----------PDLIKVE--RDTD 503
P Y L V + E + FN PD E R T+
Sbjct: 494 PVLYEKGTKIPLLTVKSVSYIIEKMEVEGVDSWFNDTENNGHAQWVHPDYRNKEYIRGTE 553
Query: 504 VLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILGFWVHRMVILGLELTGK 563
LD WF SG W ++ + L G D W +++ K
Sbjct: 554 TLDVWFDSG------TSWTTIAPRKNKP---LIDLCLEGSDQHRGWFQSLLLTYTAYQSK 604
Query: 564 --VPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALK 606
PF + HG + D +G K SKS GNV DP DVI G L K
Sbjct: 605 PEAPFSTLFTHGFIFDERGQKQSKSLGNVTDPEDVINGKLLKGKK 649
Score = 79.8 bits (188), Expect = 2e-15
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 23/263 (8%)
Query: 32 LPAAAY--RPEIVEKN-KYDKWENAGLFE--AENCSNKNNFSIILPPPNVTGKLHLGHAL 86
LP ++ +P + N KY K + L+E EN + +++F ++ PP G+LH+GHAL
Sbjct: 40 LPKTSFPIKPNVKGNNEKYFKSITSDLYEWQKENLNKEDSFVLLDGPPFANGRLHIGHAL 99
Query: 87 ACTIQDVIVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYLKSKENINRYDIGREKFVEEV 146
++D+I R + G +V ++PG D G+ +S K +K+ + + K ++
Sbjct: 100 NKILKDIINRWQLLKGRSVHYVPGWDCHGLPIES---KAIKANAE-RKSSLEIRKIAKDF 155
Query: 147 WKWREKHGDSITEQLRTLGCSLDWSRQVFTMDPKHTKAVNTAFIQLFHKNLIYRKKALVN 206
+ + +++ +G DW + TM K A F+ L K+LI+R+ V
Sbjct: 156 ANSAVQEQLMMFQRMAVMG---DWPSRYITMSDKFEIAELKVFLSLLQKDLIFRQNKPVY 212
Query: 207 WCNALKSTVSDIEVENVPINEPSDLSLPNYIK-PVRFGLIYDFAYKVYDSTEEIIVSTTM 265
W ++ +S +++ E+E + + +S Y PV I Y + + +V TT
Sbjct: 213 WSSSSRSALAESEIE----YDDNHVSTSIYFTFPVNSFSIDGCEY----NNVKALVWTTT 264
Query: 266 PETMLGDVAVAVHPEDK--RYQH 286
P T+ ++A++ HPE YQH
Sbjct: 265 PWTIPSNLALSYHPEINYGLYQH 287
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 71.7 bits (168), Expect = 5e-13
Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 76/353 (21%)
Query: 42 VEKNKYDKWENAGLFEAENCSNKNNFSIILPPPNVTGKLHLGHALACTIQDVIVRRKRSL 101
+ +N W++ F + K + P P+ G LH+GH TI D++ R R
Sbjct: 37 IAENWKSYWKSHYPFVKNDKGKKKYILSMFPYPS--GLLHIGHVRVYTISDILSRYYRMK 94
Query: 102 GYNVLWLPGTDHAGI-ATQSIVEKYLKSKENINRYDIGREKFVEEVWKWREKHGDSITEQ 160
GY V+ G D G+ A + +E + + W ++ + EQ
Sbjct: 95 GYKVIHPMGWDAFGLPAENAAIENGISASS------------------WTYENIKKMKEQ 136
Query: 161 LRTLGCSLDWSRQVFTMDPKHTKAVNTAFIQLFHKNLIYRKKALVNW----CNALKSTVS 216
+ DW R++ T +P + K F+Q+FHK L Y+ +A VNW C L +
Sbjct: 137 TYHMNIYFDWDREISTCNPDYYKWSQYLFLQMFHKGLAYQAEATVNWDPVDCTVLANEQV 196
Query: 217 D-----------IEVEN-----VPINEPSDLSL---------PNYIKPVRFGLI-----Y 246
D +E +N + I++ SD L P+ +K ++ I +
Sbjct: 197 DSHGRSWRSGAIVEKKNLRQWFLKISDYSDQLLDDLETLPKWPDKVKKMQRNWIGRTTGF 256
Query: 247 DFAYKVYDSTEEIIVSTTMPETMLGDVAVAVHPEDKRY-----------QHLEGKRVIHP 295
+ ++ + + E + V TT PET++ +A+ K +HL + ++
Sbjct: 257 EISFPLLNDKETLTVFTTKPETIIDVSFIALSKNHKLVLLESQKDPSLAEHLRNESLLDK 316
Query: 296 ------FRTN----ETIPIIFDKFVDREFGTGAVKITPAHSKVDYEVAKQHNL 338
F N + +PI + +V +GTGAV P H + D+E AK++N+
Sbjct: 317 GYQLPCFAKNPVTGKALPIFYAPYVLDCYGTGAVMGAPIHDRRDFEFAKRNNI 369
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 15/90 (16%)
Query: 445 RDWCISRQLWWGHQIPAYMCS------VDEELTWVAATDESSAKQQASKHFNTLPDLIK- 497
+DW ISRQ +WG IP C V E V D ++ + + L +K
Sbjct: 428 KDWLISRQRFWGTPIPMVHCETCGAVPVPESELPVKLPDLDKIYEKGTSPLSNLETWMKT 487
Query: 498 --------VERDTDVLDTWFSSGIYPFAAL 519
R+TD +DT+ S Y F L
Sbjct: 488 TCPKCHGPATRETDTMDTFVDSSWYYFRFL 517
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 508 WFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILGF----WVHRMVILGLELTGK 563
W + I + +G+P + + +P ++ G DI+ F W ++ GL L
Sbjct: 254 WLDALINYISVIGYPWLNEKSSLSAGWPANMHVIGKDIIRFHCIYWPAFLMAAGLPLP-- 311
Query: 564 VPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALK 606
EK+L+H NK KMSKS GNV+DP +IE +D ++
Sbjct: 312 ---EKILVHSHWTMNK-VKMSKSLGNVVDPFWLIEKYGVDTIR 350
>SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 782
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 62 SNKNNFSIILPPPNVTGKLHLGHALACTIQ-DVIVRRKRSLGYNVLWLPGTDHAGIATQS 120
SN+ N I P V HLG+ + T+ DV R R+ +N L++ GTD G AT++
Sbjct: 219 SNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTATET 278
Query: 121 -IVEKYLKSKENINRYDIGREKFVEEVWKWRE 151
+E+ + KE ++Y +EV+ W E
Sbjct: 279 KALEEGVSPKELCDKY----HALHKEVYDWFE 306
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 34.3 bits (75), Expect = 0.085
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 831 KNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMK------DNVD 884
KN + + + I NA IR K ++ NKV+ + + AMK V+
Sbjct: 51 KNAELRAELDNIRNAQAAIRSSK--QTLINKVKAQDELLKKKVKELTAMKKTVPFKSEVE 108
Query: 885 IITHLTRAKGLTFNGK----DDKTYVKGILDLNT--EIYVELVGDDIENAITNAKNKLEK 938
+ H+ + + +G D+K Y++ I N + +VEL NA+ + + +
Sbjct: 109 LDKHVKQLQAAVDSGTLKIVDEKKYLREISQCNRTRKSFVEL------NALQTSIDTIRN 162
Query: 939 RIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVR--------DHEKLMAKRKELK 983
+ +L D LN+ E K + ++ E +VR D KL+A+R + K
Sbjct: 163 ELNELRDQLNDSESKKLSDKFVEIRSELDEVRKQQDGYYKDQRKLIAERDDEK 215
>SPAC23A1.12c |||phenylalanine-tRNA ligase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 589
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 455 WGHQIPAYMCSVDEELTWVAATDESSAKQQAS 486
W +P +CS DE W+ TD+S A Q A+
Sbjct: 399 WSEVMPFILCSHDENYAWLRKTDDSKAVQLAN 430
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 933 KNKLEKRIKKLEDSLNNMEEKYSNS-NYLTTIPEWTQVRDHEKLMAKRKELKELQRLI 989
KN L+ R+ +E L Y + E TQV+ HE L AK KE+ EL+ I
Sbjct: 96 KNSLQLRLTLVEKQLEEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQI 153
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 910 LDLNTEIYVELVGDDIENAITNAKNKLEKRIKKLEDSLNNMEEK 953
L+ + EI + V I NA+ N L ++IK LE LN+ + K
Sbjct: 559 LECDVEIQKQTVQYQISNAVKENSNTLSEQIKNLESELNSSKIK 602
Score = 29.5 bits (63), Expect = 2.4
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 828 VEWKNEIIEEQAEKIL--NAVNLIRELKGLYSITNKVRPIINVRTDNE-NLIEAM--KDN 882
VE + + ++ Q + N+ L ++K L S N + I N NE NL++ M
Sbjct: 563 VEIQKQTVQYQISNAVKENSNTLSEQIKNLESELNSSK-IKNESLLNERNLLKEMLATSR 621
Query: 883 VDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKLEKRIKK 942
I++H + A + DDK +K I + E+ E + N +T + L KR +
Sbjct: 622 SSILSHNSSAGNI-----DDK--MKSIDESTREL--EKNYEVYRNEMTAIQESLSKRNQD 672
Query: 943 LEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELKELQRL 988
L + + ++ NS Y + + + A +KE KEL+ +
Sbjct: 673 LLSEMEAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSI 718
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 262 STTMPETMLGDVAVA---VHPEDKRYQH-LEGKRVIHPFRTNET-IPII-----FDKFVD 311
S T+ + L DVA + +D R H L +R++ + ET +P+I F+D
Sbjct: 499 SNTLEKEPLSDVATEYWKIKTKDIRESHILNNRRILKSLQFIETELPMIRKPTAMSAFID 558
Query: 312 REFGTGAVKITPAHSKVDYE-VAKQHNLPLLQ 342
RE G++ P K D+E + K PLL+
Sbjct: 559 REVAYGSIDCLPM-DKGDFEPIMKLDTTPLLE 589
>SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 640 IPECGVDALRFTLLSQDIKSHFVNFDVSYCHSNKLF--CNKIWQSIKYTQLSYAK-LKVI 696
+ +CG A ++D++ F +D + CH + +F KI+++ T + ++ L
Sbjct: 93 LQDCGDWACNVGSYTKDLEKQFPGYDYTACHEDPVFPKKEKIYKADYKTSIQRSRVLAEF 152
Query: 697 DSEITKQDLTFFDRWILSRLANMVQKVNDTMDS 729
+++ ++ + RL +QK D++D+
Sbjct: 153 FAKVPEKVFAVVTHGVDIRLFQKIQKPEDSLDA 185
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 31.1 bits (67), Expect = 0.79
Identities = 30/147 (20%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 812 KDASEKFLSFPKTEDYVEWKN--EIIEEQAEKILNAVNLIRELKGLYSITNK---VRPII 866
KD + L E KN E++++ + + N + E+ + +K VR +
Sbjct: 468 KDVEKSDLWIKSLRQEYESKNLLELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKL 527
Query: 867 NVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVG-DDI 925
V +N+ A+ N + + ++ +++ KDD Y + + L ++ +L ++
Sbjct: 528 QVFEENKTNKSAILANQLMTLKSSFSEVMSYELKDDDNYNEELDKLVEDVRKKLQEKEEA 587
Query: 926 ENAITNAKNKLEKRIKKLEDSLNNMEE 952
E+++ + + +LE RI S+N++ E
Sbjct: 588 ESSLRSVRERLEIRISLSVQSINDLTE 614
>SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 903 KTYVKGILDLNTE---IYVELVGDDIENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNY 959
K +K D++TE I V+LV + +TNA +K +KKLE+++ +E+ + SN
Sbjct: 203 KAALKAAEDVHTEEVPIKVKLVAPPLYVLLTNALDK-SLGLKKLEEAIGAIEKSITASNG 261
Query: 960 LTTI 963
T+
Sbjct: 262 TCTV 265
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 62 SNKNNFSIILPPPNVTGKLHLGHALACTIQDVIVRRKRS-LGYNVLWLPG-TD-----HA 114
SN +N + P V H+GHA D++ R +S GYN+ ++ TD
Sbjct: 36 SNGSNLTWYCCGPTVYDASHMGHARNYVTTDILRRILQSYFGYNITFVQNVTDIDDKIIL 95
Query: 115 GIATQSIVEKYLKSKENINRYDIGREKFVEEVW 147
Q + E+Y K + + REK V E W
Sbjct: 96 RARQQYLFEEYKKQQGTNKSHSEAREK-VTEAW 127
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1111
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 71 LPPPNVTGKLHLGHALACTIQDVIVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYLKSKE 130
+P P + G LHLGHA + + +R G VL+ G G+ + ++ + E
Sbjct: 71 MPYPYMNGALHLGHAFTLSKVEFTTAFERLNGKRVLFPMGFHCTGMPICASADRLSREIE 130
Query: 131 NIN-RYDIGREKFVEEV 146
+D+ EK EEV
Sbjct: 131 MFGPSFDVPEEK-EEEV 146
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 831 KNEIIEE--QAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMKDNV-DIIT 887
KN II +A KILN+ + I + + + + ++ +RT E L+ M D + +
Sbjct: 1046 KNRIIASLTKATKILNSASSIEQSRNSEEKSRRDSSLMEMRTQKEMLVLLMNDGLKHDLD 1105
Query: 888 HLTRAKGLTF 897
LT G TF
Sbjct: 1106 KLTEYAGRTF 1115
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 508 WFSSGIYPFAALG-WPDHD-FSRDYTEFYPLSLLATGHDI-LGFWVHRMVILGLELTGKV 564
WF G+Y + + W + + DY ++Y L + I LGFW+ ++++L LE
Sbjct: 169 WFL-GLYIYRSSNYWSNEEKLFEDYPQYYMSPLFKAYYLIQLGFWLQQILVLHLEQRRAD 227
Query: 565 PFEKVLLHGIVC 576
++ H + C
Sbjct: 228 HWQMFAHHIVTC 239
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 42 VEKNKYDKWENAGLFEAENCSNKNNFSIILPPPN 75
V +N+ ++WEN F K +FS + PPPN
Sbjct: 648 VNQNEKEEWENT--FNVMFNRVKGHFSTVFPPPN 679
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 704 DLTFFDRWILSRLANMVQ 721
DLT D+W LS+LANM +
Sbjct: 523 DLTKIDKWFLSKLANMAK 540
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 205 VNWCNALKSTVSDIEVENVPINEPSDLSLPNYIKPVRFGLIYDFAYKVYDSTEEII-VST 263
VN+C++ + D++ +N+ I++ +L L + FGL F + + T EI+ +
Sbjct: 122 VNFCHSRRIIHRDLKPQNLLIDKEGNLKLAD------FGLARSFGVPLRNYTHEIVTLWY 175
Query: 264 TMPETMLG 271
PE +LG
Sbjct: 176 RAPEVLLG 183
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 243 GLIYDFAYKVYDSTEEIIVSTTMPETMLGDVAV 275
G+ + AY +Y TE + +P+T+ GD AV
Sbjct: 79 GIEFAIAYGMYKKTETSVRLWRLPDTLSGDAAV 111
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 817 KFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLI 876
K +S E V+ II+EQ + IL A+ I EL+ T K ++TD++N++
Sbjct: 1119 KLVSLSILEKLVDCSPSIIDEQVDTILEALRKIIELRK----TEK-----TLKTDSDNIL 1169
Query: 877 EAMKDNVDII 886
+ ++ + ++
Sbjct: 1170 DLVRSALRVL 1179
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 733 QVATKAIRTLIY--NEFCDIYLEA-SKPGFENDNVRIGYA 769
++ T+ + T+++ NE + E ++PGF++DN R G+A
Sbjct: 713 KILTQKLYTIVFRCNELQSVLRECVTQPGFDSDNERDGHA 752
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 925 IENAITNAKNKLEKRIKKLEDSLN---NMEEKYSNSNYLTTIPEWTQVRDHEKLMAKR 979
+++ I N K +K K DS+ E+Y S L PEWT H K +A R
Sbjct: 857 LKHVIINEKRN-KKAAKLTADSVPFPFESREQYERSLNLPMGPEWTTRASHHKAVAPR 913
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 226 NEPSDLSLPNYIKPVRFGLIYDFAYKVYDSTEEII-VSTTMPETMLGDVAVAVHPED 281
N+ D + NY+KPVR + Y Y + ++ STT+PE + ++ E+
Sbjct: 23 NKQDDQVISNYLKPVR-----SYPYIKYSRSSLLLTASTTLPENFVISFTNSIESEE 74
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 226 NEPSDLSLPNYIKPVRFGLIYDFAYKVYDSTEEIIVSTTMPETMLGDVAVAVHPE 280
NE +DL+ + F Y Y + D+TEE++ + + + + G V HPE
Sbjct: 328 NEGADLTHNPEFTSIEFYQAYADYYDLMDTTEELL--SGLVKDLTGSYKVPYHPE 380
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 218 IEVENVPINEPSDLSLPNYIKPVRFGLIYDFAYKVY-DSTEEIIVST--TMPETMLGDVA 274
I+ N +N+ L+L G I F K D +IVS ++ + + G
Sbjct: 78 IDEPNSTVNQHHQLNLQYEALMNDLGGINIFLSKPPGDELRPLIVSIDFSVHQPIFGITF 137
Query: 275 VAVHPEDKRYQHLEGKRVIHPFRTNETIPII 305
V + P D RY H+ I P+ T +P +
Sbjct: 138 VGIDPVDHRYPHVFTNNSIIPYSTCSWLPCV 168
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,914,262
Number of Sequences: 5004
Number of extensions: 228343
Number of successful extensions: 788
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 726
Number of HSP's gapped (non-prelim): 56
length of query: 989
length of database: 2,362,478
effective HSP length: 80
effective length of query: 909
effective length of database: 1,962,158
effective search space: 1783601622
effective search space used: 1783601622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -