Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000131-TA|BGIBMGA000131-PA|IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding, IPR010978|tRNA-binding arm,
IPR001412|Aminoacyl-tRNA synthetase, class I, IPR002303|Valyl-tRNA
synthetase, class Ia, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR013155|tRNA synthetase, valyl/leucyl, anticodon-binding
(989 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_609| Best HMM Match : tRNA-synt_1 (HMM E-Value=2.2e-09) 216 6e-56
SB_52523| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-43
SB_18770| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-33
SB_19663| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-13
SB_57601| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-13
SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9) 68 3e-11
SB_29721| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 5e-10
SB_15381| Best HMM Match : Homoserine_dh (HMM E-Value=6.8) 48 5e-05
SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6) 41 0.004
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 37 0.070
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.21
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 34 0.49
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 34 0.49
SB_42080| Best HMM Match : DUF947 (HMM E-Value=3.2) 34 0.65
SB_55389| Best HMM Match : Las1 (HMM E-Value=0.074) 33 0.86
SB_38308| Best HMM Match : Vicilin_N (HMM E-Value=0.26) 33 1.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 2.0
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_12035| Best HMM Match : Pentapeptide (HMM E-Value=1.7) 32 2.0
SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0) 31 3.5
SB_37728| Best HMM Match : PPI_Ypi1 (HMM E-Value=8.3) 31 3.5
SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 31 4.6
SB_23524| Best HMM Match : Las1 (HMM E-Value=2.3) 31 4.6
SB_14891| Best HMM Match : DSBA (HMM E-Value=0.041) 31 4.6
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.0
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 31 6.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 6.0
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.0
SB_3941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.0
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5) 30 8.0
SB_51950| Best HMM Match : DUF1531 (HMM E-Value=3.3) 30 8.0
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
>SB_609| Best HMM Match : tRNA-synt_1 (HMM E-Value=2.2e-09)
Length = 250
Score = 216 bits (528), Expect = 6e-56
Identities = 110/263 (41%), Positives = 160/263 (60%), Gaps = 20/263 (7%)
Query: 102 GYNVLWLPGTDHAGIATQSIVEKYLKSKENINRYDIGREKFVEEVWKWREKHGDSITEQL 161
GYN W+PGTDHA IAT++ V LK + I++ + RE+F+E W+W+EK+G I +QL
Sbjct: 3 GYNTCWVPGTDHASIATEAKVVNMLKER-GIDKNALSREEFLEYAWEWKEKYGGIILQQL 61
Query: 162 RTLGCSLDWSRQVFTMDPKHTKAVNTAFIQLFHKNLIYRKKALVNWCNALKSTVSDIEVE 221
+ LGC+LDW+R FTMD ++ AV F+ L++K IYR ++NW K+ +SD EV
Sbjct: 62 KKLGCALDWNRTHFTMDDEYYAAVIRVFVDLYNKGQIYRGVKMINWDPKAKTALSDEEVI 121
Query: 222 NVPINEPSDLSLPNYIKPVRFGLIYDFAYKV-YDSTEEIIVSTTMPETMLGDVAVAVHPE 280
+ N +Y YK+ D E I ++T PET+LGD A+ VHP
Sbjct: 122 HKQTNSK----------------LYYVRYKLDGDKEEYITIATVRPETILGDTAICVHPN 165
Query: 281 DKRYQHLEGKRVIHPFRTNETIPIIFDKFVDREFGTGAVKITPAHSKVDYEVAKQHNLPL 340
D+RY HL+G++ P N IPIIFD ++D EFGTGA+K+TPAH DY + ++HNL +
Sbjct: 166 DERYAHLKGRKCFVPL-VNREIPIIFDDYIDIEFGTGALKVTPAHDINDYNLGQKHNLEV 224
Query: 341 LQVINVEG-LIENTEIFQGLKRY 362
+ +N +G L E ++ G R+
Sbjct: 225 IDTLNDDGTLSEAAGMYVGQDRF 247
>SB_52523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 498
Score = 175 bits (425), Expect = 2e-43
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 184 AVNTAFIQLFHKNLIYRKKALVNWCNALKSTVSDIEVENVPINEPSDLSLPNYIKPVRFG 243
AV AF++L + LIYR K LVNW L S +SDIEV+ + + L++P Y V FG
Sbjct: 5 AVTEAFVRLHEEGLIYRSKRLVNWSCTLNSAISDIEVDKKELTGRTMLTVPGYDHKVEFG 64
Query: 244 LIYDFAYKVYDSTEEIIVSTTMPETMLGDVAVAVHPEDKRYQHLEGKRVIHPFRTNETIP 303
++ F+Y V DS E++IV+TT ETMLGD +AVHP+D RY+HL GK +HPF N +
Sbjct: 65 VLVHFSYPVEDSAEKLIVATTRLETMLGDTGIAVHPDDARYKHLHGKYAVHPF-CNRRLK 123
Query: 304 IIFDKFVDREFGTGAVKITPAHSKVDYEVAKQHNLPLLQVINVEGLIENT-EIFQGLKRY 362
I+ D VD FGTGAVKITPAH DY V ++H+LP + +++ G I + + Q K +
Sbjct: 124 IVCDDMVDPAFGTGAVKITPAHDHNDYAVGQRHDLPFITMMDDNGFIRDVGDFHQHFKSF 183
Query: 363 DCRSI 367
R I
Sbjct: 184 VVRVI 188
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/69 (31%), Positives = 43/69 (62%)
Query: 356 FQGLKRYDCRSILVHKLDDLGLMKEIKPHIMTLPICSRSGNVIDHLPKEQWFLSCAELNK 415
FQGLKR+ R + L+ GL + + + M +P CSRS ++++ L K QW++ C ++
Sbjct: 210 FQGLKRFSARKDIQTALEAKGLYVKTEDNPMVVPTCSRSKDIVEPLIKPQWYVDCQDMAA 269
Query: 416 KARECVENR 424
+A + ++++
Sbjct: 270 QAVKDIDDK 278
Score = 48.0 bits (109), Expect = 4e-05
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 501 DTDVLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILGF 548
D DVLDTWFSSG++PF+ GWP+ E YP + G D L F
Sbjct: 298 DEDVLDTWFSSGLFPFSIFGWPEK------KEDYPNGIPECGTDALRF 339
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 638 NGIPECGVDALRFTL 652
NGIPECG DALRF L
Sbjct: 327 NGIPECGTDALRFAL 341
>SB_18770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 142 bits (343), Expect = 2e-33
Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
Query: 501 DTDVLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILGFWVHRMVILGLEL 560
D DVLDTWFSSG++PF+ GWP+ + D FYP +LL TGHDIL FWV RMV +GL+L
Sbjct: 25 DEDVLDTWFSSGLFPFSIFGWPEK--TDDLQVFYPGTLLETGHDILFFWVARMVKMGLKL 82
Query: 561 TGKVPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALKKKSEEMHKS 615
TGK+PF +V LH +V D G KMSKS GNVIDP+DVI GI+L + H +
Sbjct: 83 TGKLPFREVYLHAMVRDAHGRKMSKSLGNVIDPVDVINGITLQVWNSRQNHRHSA 137
>SB_19663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 73.7 bits (173), Expect = 7e-13
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 429 IPENFIQNWF-NWTDDGRDWCISRQLWWGHQIPAYMCSVDEELTWVAATDESSAKQQASK 487
+PE + F NW + DW +SR +WG IP ++ +E+ V + DE
Sbjct: 365 VPEFVKEKRFHNWLQNAHDWNVSRNRYWGTPIPLWVSDDYQEVVCVGSVDE--------- 415
Query: 488 HFNTLPDLIKVERDTDVLDTWFSSGIYPFAALGWPDHDFSRDYTEFYPLSLLATGHDILG 547
L +L V R TD+ P+A + +P + D+ + +P +A G D
Sbjct: 416 ----LAELSGV-RLTDL-----HRENMPYAQVHYP-FERKEDFEKTFPADFIAEGIDQTR 464
Query: 548 FWVHRMVILGLELTGKVPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALK 606
W + ++++ L K PF+ ++++G+V GAKMSK + N DP+++I DAL+
Sbjct: 465 GWFYTLLVISTALFDKPPFKNLIVNGLVLAADGAKMSKRKKNYPDPMEIINKHGSDALR 523
Score = 37.5 bits (83), Expect = 0.053
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 137 IGREKFVEEVWKWREKHGDSITEQLRTLGCSLDWSRQVFTMDPKHTKAVNTAFIQLFHKN 196
+G K+ +E K ++ + LG +D+ T+ P + V F QL KN
Sbjct: 73 MGIAKYNDECRKIVMRYSTDWERIVSRLGRWIDFENDYKTLYPWFMETVWWVFKQLHEKN 132
Query: 197 LIYRKKALVNWCNALKSTVSDIEVE-------------NVPINEPSDLSL-----PNYIK 238
++YR ++ + + +S+ E + P++E D+S+ +
Sbjct: 133 MVYRGFKVMPYSTVCNTPLSNFESNQNYKEVQDPAVFVSFPLDESPDVSMIAWTTTPWTL 192
Query: 239 PVRFGLIY--DFAY-KVYD-STEEI-IVSTTMPETMLGDVAVAVHPEDKRYQHLEGK--R 291
P L+ D Y KV D STE++ I+ + + E + LEGK +
Sbjct: 193 PSNLALVVNKDMEYVKVKDNSTEKVYIMMAARLDALFKTPEEYTVLERFKGASLEGKTYK 252
Query: 292 VIHPF----RTNETIPIIFDKFVDREFGTGAVKITPAHSKVDYEVA 333
+ P+ +++ I+ D +V E GTG V PA + DY V+
Sbjct: 253 PMFPYFEQLKSSGAFRILTDSYVTEESGTGVVHSAPAFGEDDYRVS 298
>SB_57601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 73.7 bits (173), Expect = 7e-13
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 631 KANFSATNGIPECGVDALRFTLLSQDIKSHFVNFDVSYCHSNKLFCNKIWQSIKYT-QLS 689
KA F GI G DALRFT L+ + FD+ + FCNKIW + + + +
Sbjct: 14 KAEFP--EGIAAYGTDALRFTNLALASTGRDIKFDMGRVEGYRNFCNKIWNAANFVIENT 71
Query: 690 YAKLKVIDSEITKQDLTFFDRWILSRLANMVQKVNDTMDSYDFQVATKAIRTLIYNEFCD 749
+ I+ E + +L+ DRWI+S L +V +D++ F +A A+ I++E+C
Sbjct: 72 DGQDTGINGE--EVELSSVDRWIISALQRTEAEVTRQLDAFRFDLAAHALYEFIWDEYCA 129
Query: 750 IYLEASKPGFENDNVRI 766
YLE KP ++N I
Sbjct: 130 WYLELVKPVLWDENASI 146
>SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9)
Length = 305
Score = 68.1 bits (159), Expect = 3e-11
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 640 IPECGVDALRFTLLSQDIKSHFVNFDVSYCHSNKLFCNKIWQSIKYTQLSYAKLKVIDSE 699
I E G DA+RF+++ + + +D S + F NK+W ++K + S+ D
Sbjct: 43 IEEHGADAVRFSVMISSPAGNDLLYDESSLEQGRNFSNKMWNALKLIK-SWEGRTTKDVA 101
Query: 700 ITKQDLTFFDRWILSRLANMVQKVNDTMDSYDFQVATKAIRTLIYNEFCDIYLEASKPGF 759
I +Q F W+ R+A Q++ + M + K I +LI+++FC YLE KP
Sbjct: 102 IGEQQ--FAVDWMEQRVAKASQQIEELMKDFRLSEGLKTIYSLIWDDFCSWYLEWVKPAQ 159
Query: 760 ENDNVRIGYAHAHTLSAVLNTSLRCLYPFMVYITQEL 796
E + Y A L+ L+P+M ++T+E+
Sbjct: 160 EASMSQELYERT---VATFEQLLQLLHPYMPFVTEEM 193
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 557 GLELTGKVPFEKVLLHGIVCDNKGAKMSKSRGNVIDPIDVIEGISLDALK 606
G E G+ PF+KV GIV D +G KMSK GN D + +IE DA++
Sbjct: 3 GYEYLGQKPFDKVYFTGIVRDKQGRKMSKQLGNSPDLLALIEEHGADAVR 52
>SB_29721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 64.1 bits (149), Expect = 5e-10
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 663 NFDVSYCHSNKLFCNKIWQSIKYTQLSYAK-LKVIDSEITKQDLTFFDRWILSRLANMVQ 721
N DV + FCNK+W + K+ + K + + + DRWILSRL+ +
Sbjct: 5 NLDVLRVQGYRHFCNKLWNATKFALSGLGEGFKPNPTTELLGNESLMDRWILSRLSFAEK 64
Query: 722 KVNDTMDSYDFQVATKAIRTLIYNEFCDIYLEASKPGFENDNVRIGYAHAHTL 774
ND +YDF T A E CD+YLEA KP ++ + A +TL
Sbjct: 65 ACNDGFTAYDFPAITTATYNFWLYELCDVYLEAIKPVLQSGDQEAILATRNTL 117
>SB_15381| Best HMM Match : Homoserine_dh (HMM E-Value=6.8)
Length = 489
Score = 47.6 bits (108), Expect = 5e-05
Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 32/277 (11%)
Query: 42 VEKNKYDKWENAGLFEAE------NCSNKNNFSIILPPPNVTGKLHLGH--ALACTIQDV 93
+E + +WE +FE + + + K F P P + GKLHLGH LA D
Sbjct: 155 IETDVQQQWEKMKIFEIDAPDPGSDAAKKGKFFCTFPYPYMNGKLHLGHTFTLAKACADK 214
Query: 94 IVRRKRSLGYNVLWLPGTDHAGIATQSIVEKYLKSKENIN-RYDIGREKFV--EEVWK-- 148
+ R G N P D + + K L N+ ++ I + + EE+ K
Sbjct: 215 LKREMEQFG-NPPRFPAVDENTQDKKQMKSKVLAKTGNVTYQWQIMQSLGIPQEEIPKFA 273
Query: 149 ----WREKHGDSITEQLRTLGCSLDWSRQVFTMD--PKHTKAVNTAFIQLFHKNLIYRKK 202
W E L+++G DW R T D P + V F L + + K
Sbjct: 274 ETDYWLSYFPPLAKEDLKSMGLKTDWRRSYITTDVNPYYDSFVRWHFWNLKERGKVKFGK 333
Query: 203 ALVNWCNALKSTVSDIEVENVPINEPSDLS------LPNYIKPVRFGLIYDF----AYKV 252
+ A D + ++ P + + +P + + +R+ +I + A V
Sbjct: 334 RYTIFSPADDQPCMDHDRQSGEGVGPQEYNVIKMKVVPPFKEKLRYSVIPELFLSHANFV 393
Query: 253 YDSTEEIIVSTTM-PETMLGDVAVAVHPEDKRYQHLE 288
+ +V+ T+ PETM G V P D + Q+L+
Sbjct: 394 LEGKNVYLVAATLRPETMYGQTNCWVRP-DMKVQYLD 429
>SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6)
Length = 426
Score = 41.1 bits (92), Expect = 0.004
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 8/218 (3%)
Query: 681 QSIKYTQLSYAKLKVIDSEITKQDLTFFDRWILSRLANMVQKVNDTMDSYD-FQVATKAI 739
QSI Q + D T + D+WILS ++VQ V+ MD+Y + V + +
Sbjct: 42 QSIDQFQRVHNVNFAYDENNTMELHNIMDKWILSFTQSLVQFVHQEMDAYRLYTVVPRLV 101
Query: 740 RTLIYNEFCDIYLEASKPGFENDNVRIGYAHA-HTLSAVLNTSLRCLYPFMVYITQELIP 798
+ + Y + Y+ ++ + D + A TL V+ T + + PF ++T+ +
Sbjct: 102 KFIEY--LTNWYVRFNRKRLKGDQGQEDAMQAIQTLFGVVLTITKLMAPFTPFLTEHIYQ 159
Query: 799 TIPDFERNVIINFKDASEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRELKGLYSI 858
+ F ++ S +L PKT + + + IE ++ + L R ++ +I
Sbjct: 160 NMKPFIVFDESEKENDSIHYLMVPKTRENL--IHTEIERAVSRMQATIELGRVVRDRMTI 217
Query: 859 TNKVRPI--INVRTDNENLIEAMKDNVDIITHLTRAKG 894
K + + V +D + ++ D T R KG
Sbjct: 218 PTKELNVRKVTVSSDKDKFGLRLRAEPDSQTLGRRLKG 255
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 37.1 bits (82), Expect = 0.070
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 831 KNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRT---DNENLIEAMKDNVDIIT 887
+N +E+ I +A ++IR K + + + II+V + EN IE + + VD+++
Sbjct: 239 ENAETKEEVSIIPSAASIIR--KESKTPAHDMMQIISVSKRLEETENSIEGLTELVDVLS 296
Query: 888 -HLTRAKGLTFNGKDDKTYVKGILDLNTEIY-VELVGDDIENAITNAKNKLEKRIKKLED 945
LT K + K+ + DL + I V+ DD +N+ + + LEK + +++
Sbjct: 297 AELTEVKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDDSQNSHASQLSALEKTVDEMKK 356
Query: 946 SLNNMEEKYSN 956
+LN + SN
Sbjct: 357 ALNQQLKDVSN 367
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 35.5 bits (78), Expect = 0.21
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 818 FLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIR-----ELKGLYSITNKVRPIINVRTDN 872
F + PK Y + K +E++A K+ +N+ R ++G++ + ++P+ T
Sbjct: 51 FDNSPKRFQYFKEKVNELEKEATKV-KLINVCRTRWIDRIEGMHRVIELLQPV--AETFK 107
Query: 873 ENLIEAMKD-NVDI-ITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAIT 930
+ + KD N + I L+F+ V ILDL I V+L +I+ +
Sbjct: 108 DIALNQGKDWNPNSRIDAQALVNALSFSFIITVVVVSYILDLTKPITVKLQAKEID--LL 165
Query: 931 NAKNKLEKRIKKLEDSLNNMEEKYS 955
AK++L L D NN++E+Y+
Sbjct: 166 EAKDELRILKSSLRDMQNNIDERYN 190
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 34.3 bits (75), Expect = 0.49
Identities = 42/196 (21%), Positives = 92/196 (46%), Gaps = 22/196 (11%)
Query: 804 ERNVIINFK-DASEK---FLSFPKTEDYVE---WKNEIIEEQAEKILNAVNLIRELKGLY 856
ER+ +I ++ D++ K L K +Y++ K + + ++ ++ LN + RE
Sbjct: 54 ERSQVIEYQTDSTRKATEILEKSKELEYLDKEYTKQKYVLDELQERLNDLTQERENYETR 113
Query: 857 SITNKVRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEI 916
T + + I ++ +N +L + + V +T T +D +T ++ + + N+++
Sbjct: 114 EKTLQSK-ITSIEKENNSLRDELNKTVSELTQTTAEL------QDKQTMLESVHERNSDL 166
Query: 917 Y-----VELVGDDIENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRD 971
+L G+D +++ + LEKR+ + D LN E + S ++ + T+
Sbjct: 167 ERRLQDCKLSGNDKYDSLERERQTLEKRLSEARDQLN--EARASTNDRINTLNSLVSTL- 223
Query: 972 HEKLMAKRKELKELQR 987
+E+L K L E +R
Sbjct: 224 NERLERKESTLMECRR 239
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 34.3 bits (75), Expect = 0.49
Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 11/253 (4%)
Query: 745 NEFCDIYLEASKPGFENDNVRIGYAHAHTLSAVLNTSLRCLYPFMVYITQELIPT---IP 801
N+ +I E + +R AH + +L + ++ EL+ +
Sbjct: 3314 NDLAEIQRALKYSEEEKEKLRNDMISAHNMVCLLKDDNQHAEENKGQLSNELLSLQRKLA 3373
Query: 802 DFERNVIINFKDA-SEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRELKGLYSITN 860
D E+ + N DA ++ + + E +N + + V+ ++ N
Sbjct: 3374 DAEKKLRDNRNDALGDELETLKRDLSSSEKENTDLRSTVRSLKAEVDSLKHRLSEVEEDN 3433
Query: 861 KVRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYV-- 918
+V P+IN T+ E I+ ++ + + + T+ + + K +L T+ Y
Sbjct: 3434 RVEPLINELTEKEQRIQEIERELKV--YETKHTEIRVYEEKYVEIEKRYYELETKYYTVI 3491
Query: 919 -ELVGDDIENAITNAK-NKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLM 976
E+ ++N IT + +L+K ++ E N++ K S+ T+ RD
Sbjct: 3492 QEMKDATVDNDITKDELERLKKIVENDEKEKENLKRKLQGSDSDGTMERKRLQRDMSDAR 3551
Query: 977 AKRKEL-KELQRL 988
A+ L KE++RL
Sbjct: 3552 AEISRLEKEVKRL 3564
>SB_42080| Best HMM Match : DUF947 (HMM E-Value=3.2)
Length = 274
Score = 33.9 bits (74), Expect = 0.65
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 789 MVYITQELIPTIPDFERNVIINFKDASEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNL 848
M ++T+EL +P RN S +PK + W+ +EEQ E +L+ V +
Sbjct: 1 MPFVTEELYQRLP--RRN---GQSAPSICVTPYPKN---LPWRQAELEEQVEFMLSIVKI 52
Query: 849 IRELKGLYSITNKVRPIINVRTDNENLIEAMKDNVD 884
+R +K Y + K +P + ++ L ++K VD
Sbjct: 53 VRSIKQEYQVV-KAKPEVYAVFTDDALANSIKPLVD 87
>SB_55389| Best HMM Match : Las1 (HMM E-Value=0.074)
Length = 444
Score = 33.5 bits (73), Expect = 0.86
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 114 AGIATQSIVEKYLKSKENINRYDIGREKFVEEVWKWREKHGDSITEQLRTLGCSLDWSR 172
A +ATQ + ++ K N +IG + E WK + KHG I++ R C ++ R
Sbjct: 135 AFMATQRVFNAKIEDKVTKNTIEIGEQSIEIEDWKQKTKHG--ISDAKRECECKIEMLR 191
>SB_38308| Best HMM Match : Vicilin_N (HMM E-Value=0.26)
Length = 286
Score = 33.1 bits (72), Expect = 1.1
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 926 ENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELKEL 985
EN I ++K E I++LE S +NM+++Y+ T E R L K + ++
Sbjct: 22 ENRIKRVRDKYESEIRELERSESNMQQRYNEMKERLTEVEGELSRQRSLLRQKETQQQDS 81
Query: 986 QRLI 989
++ +
Sbjct: 82 EQTL 85
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.3 bits (70), Expect = 2.0
Identities = 33/180 (18%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 825 EDYVEWKNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLI-------E 877
E V+ + +++ ++LNA ++E+ T+ + +V + +NL+ E
Sbjct: 1597 EVQVQEQESMVQNNEMQLLNAERDLQEMLMAKDATDSAENLESVSKERDNLLRDVNRLRE 1656
Query: 878 AMKDNVDIITHLTRAK--------GLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAI 929
+ N IT++T+ + L D + +KG+ N ++ EL+ + + A
Sbjct: 1657 EVSTNKTTITNVTKRRDELEKENFSLRGQASDAEMKIKGLEQDNDDLNRELIKNQKKTA- 1715
Query: 930 TNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELKELQRLI 989
LE+ + +L N+ E+ ++ + + + + +LM R ++ L+R++
Sbjct: 1716 -----DLEEAVNRLVTEKQNLAEEVDDTRHRLDQQKEANMANERELMEIRSAIEGLERVL 1770
Score = 31.1 bits (67), Expect = 4.6
Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 873 ENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAITNA 932
E++ +K VD +T+ + + D V + +L +++ DD N++ N
Sbjct: 411 ESVEVMLKKQVDDLTNELEVTKTKVSDRVDGAMVSRVQELESQL------DDTSNSVNNL 464
Query: 933 KNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELKELQRL 988
K+ + ++ +D +E S LTT E +R++E+ +RK ++ +L
Sbjct: 465 KSDYDMVLRDRDDLRKEIEVI---STKLTTTNEKLNIRENERADLERKVMESDNKL 517
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 893 KGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNK---LEKRIKKLEDSLNN 949
+GL KD++ V L + E + E G ++E I + +N+ LE+R+K+LE N
Sbjct: 383 EGLERKLKDEQKVVSE-LKIKLERFSE-DGTELEEKIRSQRNRITELERRVKELEKEKNL 440
Query: 950 MEEKYSNSNYLTTIPEWTQVRD-HEKLMAKRKELKE 984
+E++ + + +++D +EK+ K+LKE
Sbjct: 441 LEQQVKTMKNKSDDDD-KKIKDLNEKVRVLEKQLKE 475
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 819 LSFPKTEDYVEWKNEIIEEQ---AEKILNAVNLIRELKGLYSITNKVRPI--INVRTDN- 872
L P E Y + E + E+ EK++ + + L+ Y+ TN ++P+ IN RT
Sbjct: 82 LYVPINEKYKQLDVENLLEKNNVKEKLIYTIQALAILEK-YA-TNLLKPMKPINWRTVKF 139
Query: 873 -ENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGD 923
+L+ +N++ T + R G T N +D ++ I++ N E EL D
Sbjct: 140 TSSLVRTYLENIEGSTDILRQMGYTANVQDGLSFPDNIIEPNVEKVRELAAD 191
>SB_12035| Best HMM Match : Pentapeptide (HMM E-Value=1.7)
Length = 385
Score = 32.3 bits (70), Expect = 2.0
Identities = 33/187 (17%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 808 IINFKDASEKFLSFPKTEDYVEWKNEIIEE-----QAEKILNAVNLIRELKGLYSITNKV 862
++N ++ASE ++ + + V E E +A + ++ VNL R + + ++
Sbjct: 202 VVNLREASESMVNLREASESVVNLREASESMVNLREASESVSMVNLRRASESMVNLREAS 261
Query: 863 RPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVG 922
++N+R +E+++ ++++ + + +L A + ++ V + + +E V+L
Sbjct: 262 ESMVNLREASESVV-SLREASESMVNLREASESVVSLREASESVVNLREA-SESMVKL-- 317
Query: 923 DDIENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKEL 982
+ ++ N + E + L ++ +M S + ++P +R+H K +E
Sbjct: 318 REASESVVNLREASES-VVNLREASESMVNLREASESVVSLPR--SIREHGKFTRSIREH 374
Query: 983 KELQRLI 989
+ R I
Sbjct: 375 GKFTRSI 381
>SB_38609| Best HMM Match : NAD_binding_5 (HMM E-Value=0)
Length = 603
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 898 NGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKL 936
NG T+V G+++L + V +VGDD ++ T K+ L
Sbjct: 284 NGSPQNTFVPGVMELAEQNDVFIVGDDFKSGQTKIKSVL 322
>SB_37728| Best HMM Match : PPI_Ypi1 (HMM E-Value=8.3)
Length = 203
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 898 NGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKLEKRIKKLEDSLNNMEEKYSNS 957
NG+D+ + ++ L E+V DD ++ I K+K KRIKK + + + N
Sbjct: 69 NGEDNNQDPRPVIRLRHAQLAEIV-DDKKSRIRGVKHKERKRIKKSPLAWDRTRSEEQNG 127
Query: 958 NYLTTIP 964
N+ +P
Sbjct: 128 NHTYGLP 134
>SB_19200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 852
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 898 NGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKL 936
NG T+V G+++L + V +VGDD ++ T K+ L
Sbjct: 150 NGSPQNTFVPGVMELAEQNDVFIVGDDFKSGQTKIKSVL 188
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 31.1 bits (67), Expect = 4.6
Identities = 27/139 (19%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 812 KDASEKFLSFPKTEDYVEWKNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTD 871
+D ++ + K D++ WK+E++E++ + + ++ ++ K + + T+ + + T+
Sbjct: 782 EDLKKENMDLAKRIDHMTWKSEMMEKKMQDMASSSLMMN--KVITTTTDSINDLNEEMTE 839
Query: 872 NENLIE-AMKDNVDIITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAIT 930
+ +E + D+ T L +A+G G++D + + + + + L G +E+++
Sbjct: 840 LKIQLETGFETEQDLRTSLNQAEGRIKLGEED--HNRYMAQRESILQTNLGG--VESSLE 895
Query: 931 NAKNKLEKRIKKLEDSLNN 949
K EK + LNN
Sbjct: 896 ENKRLAEKYTILQQQFLNN 914
>SB_23524| Best HMM Match : Las1 (HMM E-Value=2.3)
Length = 183
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 114 AGIATQSIVEKYLKSKENINRYDIGREKFVEEVWKWREKHGDS 156
A +ATQ + ++ K N +IG + E WK + KHG S
Sbjct: 135 AFMATQRVFNAKIEDKVTKNTIEIGEQSIEIEDWKQKTKHGIS 177
>SB_14891| Best HMM Match : DSBA (HMM E-Value=0.041)
Length = 172
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 62 SNKNNFSIILPPPNVTGKLHLGHALACT-IQDVIVRRKRSLGYNVLWLPGTDHAGIATQS 120
SN ++ + LPP + + +A I R RSL YN LW+ G D IA+ S
Sbjct: 64 SNASDIPLALPPERPDSRFAILCVIAAAQIDTEKAARFRSLFYNALWVDGQD---IASPS 120
Query: 121 IVEKYLK 127
++ + L+
Sbjct: 121 VIFEALE 127
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 30.7 bits (66), Expect = 6.0
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 867 NVRTDNENLIEAMKDNVD---IITHLTRAKGLTFNGKD-DKTYVKGILDLNTEIYVELVG 922
NV ++ I+ MK + D L +AK L ++ + + G E+Y E +
Sbjct: 2 NVDKAYQHFIQVMKKDPDHKKARMILRKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALE 61
Query: 923 DDIENAITNAK---------NKLEKRIKKLEDSLN--NMEEKYSNSN------YLTTIPE 965
D +N TNAK +KL K + +ED N++ Y+ + Y+ +
Sbjct: 62 IDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKY 121
Query: 966 WTQVRDHEKLMAKRKELKELQRLI 989
VRD+E L K + +E +RL+
Sbjct: 122 EEAVRDYESLCKKDRSSREFRRLL 145
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 30.7 bits (66), Expect = 6.0
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 867 NVRTDNENLIEAMKDNVD---IITHLTRAKGLTFNGKD-DKTYVKGILDLNTEIYVELVG 922
NV ++ I+ MK + D L +AK L ++ + + G E+Y E +
Sbjct: 2 NVDKAYQHFIQVMKKDPDHKKARMILRKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALE 61
Query: 923 DDIENAITNAK---------NKLEKRIKKLEDSLN--NMEEKYSNSN------YLTTIPE 965
D +N TNAK +KL K + +ED N++ Y+ + Y+ +
Sbjct: 62 IDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQAMNLDHTYTKAYLKRANCYMESEKY 121
Query: 966 WTQVRDHEKLMAKRKELKELQRLI 989
VRD+E L K + +E +RL+
Sbjct: 122 EEAVRDYESLCKKDRSSREFRRLL 145
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 6.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 927 NAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIPE 965
N++ + + LEK IK+L+ NN+E + SN ++ I E
Sbjct: 1026 NSLKDRIDALEKEIKELKAQRNNLETELSNKSHKLAITE 1064
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 30.7 bits (66), Expect = 6.0
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 844 NAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMKDNVDIITHLTRAKGLTFNGKDDK 903
N N+++E+ G S N R I N+ + N+ + E +K+ + ++ AK K++K
Sbjct: 71 NVTNMVQEISGHASEKN--RTITNMCSRNKAIFEDLKNKCEKVSIDKDAKE-----KENK 123
Query: 904 TYVKGILDLNTEIYVELVGDDIENAITNAKN--KLEKRIKKLEDSLNNMEEKYSN--SNY 959
DL +++ DD++ A N +L+++ LE +N ++ S
Sbjct: 124 -------DLQSKL--NTANDDLKVAKRRCGNVEELKEKSTLLEREVNQQNKEIERILSEN 174
Query: 960 LTTIPEWTQVRDHEKLMAKRKELKELQR 987
T+ + ++ + E LM K KEL++LQ+
Sbjct: 175 KVTLADLSKTQ--ENLMKKAKELEDLQQ 200
>SB_3941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 30.7 bits (66), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 116 IATQSIVEKYLKSKENINRYDIGREKFVEEVWKWREKHGDS 156
+ATQ + ++ K N +IG + E WK + KHG S
Sbjct: 117 MATQRVFNAKIEDKVTKNTIEIGEQSIEIEDWKQKTKHGIS 157
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 609 SEEMHKSGILNKDELKKAYSYHKANFSATNGIPECGVDALRFTLLSQDIKSHFVNFDVSY 668
SEE K L + + S +AN++ G+ +D+L+ + + I+ H ++ V +
Sbjct: 2073 SEEKRKRRRLERKWVSTGLSTDRANYAYQCGVVNNLIDSLKTSYYTSIIQEHSLDQKVHF 2132
Query: 669 CHSNKLFCNK 678
NKLF K
Sbjct: 2133 KTINKLFEKK 2142
>SB_839| Best HMM Match : Spond_N (HMM E-Value=2.5)
Length = 873
Score = 30.3 bits (65), Expect = 8.0
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 896 TFNGKDDKTYVKGILDLNTEIYVELVGDDI-ENAITNAKNKLEKRIKKLEDSLNNMEEKY 954
T G+ +++Y+K L N Y + G+DI E A A+ + I +L + ++
Sbjct: 630 TDKGEKEESYLKSCLLSNHFTYCQKQGEDIEEEAEQQARTAQIQTIMRLFALACKTDREF 689
Query: 955 SNSNYLTTIPEWTQVRDHEKLMAKRKELKELQRL 988
+ Y +P+ V K A +++ QRL
Sbjct: 690 RAAEYCELLPDQRSVSLAIKYAAGNRKMNLAQRL 723
>SB_51950| Best HMM Match : DUF1531 (HMM E-Value=3.3)
Length = 198
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 886 ITHLTRAKGLTFNGKDDKTYVKGILDLNTEIYVELVGDDIENAITNAKNKLEKRIKKLED 945
+T + L+ D + YVKG E + G I I K+K KRIKK
Sbjct: 63 MTFEVKTASLSMYADDHQLYVKGGTAECVEQILNEEGHKISQWIRGVKHKERKRIKKSPL 122
Query: 946 SLNNMEEKYSNSNYLTTIP 964
+ + + N N+ +P
Sbjct: 123 AWDRTRSEEQNGNHTYGLP 141
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 925 IENAITNAKNKLEKR---IKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKE 981
++ A +N KN+ E + +K+L DSL + + + + SN E + R E+L+ ++
Sbjct: 2918 LDEASSNLKNQTEVQTVELKRLRDSLTDAKNQLTTSNNNYEGSERERKRLMEELIHSEEQ 2977
Query: 982 LKELQ 986
+K+LQ
Sbjct: 2978 VKKLQ 2982
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,151,581
Number of Sequences: 59808
Number of extensions: 1510817
Number of successful extensions: 4312
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4251
Number of HSP's gapped (non-prelim): 72
length of query: 989
length of database: 16,821,457
effective HSP length: 89
effective length of query: 900
effective length of database: 11,498,545
effective search space: 10348690500
effective search space used: 10348690500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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