GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000131-TA|BGIBMGA000131-PA|IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding, IPR010978|tRNA-binding arm,
IPR001412|Aminoacyl-tRNA synthetase, class I, IPR002303|Valyl-tRNA
synthetase, class Ia, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR013155|tRNA synthetase, valyl/leucyl, anticodon-binding
         (989 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   1.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   4.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   5.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   5.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   5.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   5.6  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    25   7.4  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    25   7.4  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   7.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   9.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   9.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 914 TEIYVELVGDDIENAITNAKNKLEK---RIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVR 970
           T +Y E   + + N +  ++ KLEK    ++ +ED L  +EE+      L+   +W + R
Sbjct: 165 TRVYDERKEESM-NLLRESEGKLEKISEYLRTIEDRLKTLEEE---KEELSEYQKWDKAR 220

Query: 971 DHEKLMAKRKELKELQR 987
              + +    ELKE ++
Sbjct: 221 RTLEYVIYETELKETRK 237


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 4.2
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 582  KMSKSRGNVIDPIDVIEGISLDALKKKSEEMHKSGILNKDELKKAYSYHKANFSATNGIP 641
            K+  +   VID I + + + L  LKKK     K   L  D        +K +        
Sbjct: 2954 KLPSAASKVIDEIIITDNLVLTILKKKHRRSVKYSNLTSDSQSYETIKNKNSLMRFECCI 3013

Query: 642  ECGVDALRFTLLSQDIKSHFVN 663
            +C  DA   T  S  + ++++N
Sbjct: 3014 DCSQDASSITSNSYKV-TNWIN 3034


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 806 NVIINFKDASEKFLSFPKTEDYVEWKNEI 834
           ++I+N KDAS    SF  +E   EW   I
Sbjct: 92  HLIVNCKDASTVRCSFATSEQCSEWHRRI 120


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 806 NVIINFKDASEKFLSFPKTEDYVEWKNEI 834
           ++I+N KDAS    SF  +E   EW   I
Sbjct: 92  HLIVNCKDASTVRCSFATSEQCSEWHRRI 120


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 627 YSYHKANFSATNGIPECG 644
           Y  H ANFSA NG P  G
Sbjct: 53  YGAHSANFSAQNGWPTDG 70


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.8 bits (54), Expect = 5.6
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 936 LEKRIKKLEDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELK 983
           L+  I++LE+   N+E K  N      I    Q+   EK  AKR+E K
Sbjct: 96  LKATIQQLEEQ--NLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEK 141


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 831 KNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMKDNVDIITHLT 890
           +N ++E    KI   + +I       S+T++VR +  V+  N+      +  VDII  L+
Sbjct: 182 RNVVLERGGRKI-GIIGVIHHATDTLSMTDRVRFLDEVQCINQEATALKQLGVDIIVVLS 240

Query: 891 RAKGLTFN 898
              G T +
Sbjct: 241 HC-GFTID 247


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 829 EWKNEIIEEQAEKILNAVNLIRELKGLYSITNKVRPIINVRTDNENLIEAMKDNVDIITH 888
           +++  ++ E+  + +  + +I       S+T++VR +  V+  N+      +  VDII  
Sbjct: 179 KYQRSVVLERGGRKIGIIGVIHHATDTLSMTDRVRFLDEVQCINQEATALKQLGVDIIVV 238

Query: 889 LTRAKGLTFN 898
           L+   G T +
Sbjct: 239 LSHC-GFTID 247


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 662 VNFDVSYCHSNKLFCNKIWQSIKYTQLSYAKLKVID-SEITKQD 704
           V  +  YC     F N+++ +  Y+  ++AK+  ID SE  +Q+
Sbjct: 574 VTGEAIYCDDIPKFANELYLAFVYSTKAHAKILSIDASEALEQE 617


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 910 LDLNTEIYVELVGDDIE-NAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTT 962
           LD  T +  E    D + +  TN    LE+R+  L+ S  N+  +YS ++ + T
Sbjct: 263 LDSKTLVAWEQYSVDFKTDEFTNLVEFLEQRVNILKSSAQNICNQYSANSIMVT 316


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 9.7
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 310 VDREFGTGAVKITPAHSKVDYEVAKQHNLPLLQVINVEGLIENTEIFQG------LKRYD 363
           V++ F    +  +  +      V+ QH L  L+ I +    +N  +FQG      +K   
Sbjct: 100 VEKTFQRSVINASSEYRINGSVVSPQHYLAELEKIGINVKAKNFLVFQGAVETIAIKNAK 159

Query: 364 CRSILVHKLDDLGLMKE 380
            R+ L  ++   GL+KE
Sbjct: 160 ERTALFEEISGSGLLKE 176


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,047,093
Number of Sequences: 2123
Number of extensions: 43945
Number of successful extensions: 79
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 72
Number of HSP's gapped (non-prelim): 14
length of query: 989
length of database: 516,269
effective HSP length: 71
effective length of query: 918
effective length of database: 365,536
effective search space: 335562048
effective search space used: 335562048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)