Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000131-TA|BGIBMGA000131-PA|IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding, IPR010978|tRNA-binding arm,
IPR001412|Aminoacyl-tRNA synthetase, class I, IPR002303|Valyl-tRNA
synthetase, class Ia, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR013155|tRNA synthetase, valyl/leucyl, anticodon-binding
(989 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 4.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 5.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 5.3
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 5.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 5.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 5.3
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 7.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 7.0
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 9.3
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 9.3
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 944 EDSLNNMEEKYSNSNYLTTIPEWTQVRDHEKLMAKRKELKELQRLI 989
ED L+N+ +K + L I W Q+ E + ++++ ++ ++
Sbjct: 37 EDKLDNLMDKQFKNKSLPVIEIWDQMTVKELANSAKRDINDVLNVL 82
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 327 RAKGMELQEKSSKSLLANVLDIDDDI 352
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 925 IENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIP 964
I ++++N N KKL NN ++ Y N NY+ IP
Sbjct: 81 IISSLSNNYNYNNNNYKKLY--CNNYKKLYYNINYIEQIP 118
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 5.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 925 IENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIP 964
I ++++N N KKL NN ++ Y N NY+ IP
Sbjct: 81 IISSLSNNYNYNNNNYKKLY--CNNYKKLYYNINYIEQIP 118
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 395 RAKGMELQEKSSKSLLANVLDIDDDI 420
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 5.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 891 RAKGLTFNGKDDKTYVKGILDLNTEI 916
RAKG+ K K+ + +LD++ +I
Sbjct: 395 RAKGMELQEKSSKSLLANVLDIDDDI 420
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.8 bits (49), Expect = 7.0
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 314 FGTGAVKITPAHSKVDYEVAKQHNLPLLQVINVEGLIENTEIFQGL 359
+GTGAV + P + Y++ K P++ V+ ++E + F L
Sbjct: 148 WGTGAVTVNPELKLLQYDIGK----PVVAEETVDYMLEKSGNFSRL 189
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 7.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 925 IENAITNAKNKLEKRIKKLEDSLNNMEEKYSNSNYLTTIP 964
I ++++N N KKL NN + Y N NY+ IP
Sbjct: 81 IISSLSNNYNYNNNNYKKLY--CNNYRKLYYNINYIEQIP 118
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 23.4 bits (48), Expect = 9.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 438 FNWTDDGRDWCISRQLWWGHQIPAYMCSVDEELT 471
F DD R+ ++ L + +IPAY V + ++
Sbjct: 80 FGLVDDKRELSLNGMLTFFQRIPAYRAEVQKAIS 113
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.4 bits (48), Expect = 9.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 110 GTDHAGIATQSIVEKYLKSKENINRYD 136
G + I SI E Y S N+N+ D
Sbjct: 4 GNNETNITNSSITETYFVSAYNLNQED 30
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,246
Number of Sequences: 429
Number of extensions: 14351
Number of successful extensions: 81
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 16
length of query: 989
length of database: 140,377
effective HSP length: 64
effective length of query: 925
effective length of database: 112,921
effective search space: 104451925
effective search space used: 104451925
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)
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