Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000129-TA|BGIBMGA000129-PA|IPR002108|Actin-binding,
cofilin/tropomyosin type
(113 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 45 2e-05
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 42 2e-04
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 4e-04
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 32 0.095
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.095
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11) 29 0.67
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 27 3.6
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 27 4.7
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 27 4.7
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0) 27 4.7
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 27 4.7
SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4) 27 4.7
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.3
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5) 26 6.3
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 26 6.3
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 26 6.3
SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43) 26 8.3
SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8) 26 8.3
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 26 8.3
SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6) 26 8.3
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 45.6 bits (103), Expect = 1e-05
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 4 LEASGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAE 52
+ SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A
Sbjct: 1 MSMSGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAI 60
Query: 53 YEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKML 110
++Q LE L E RY L+D + + + L + WC D A +KK+M+
Sbjct: 61 FDQMLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMV 110
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 44.8 bits (101), Expect = 2e-05
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 4 LEASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--F 56
+ SG+ V D + +K K H+Y +F I DE + V ++V E ++ F
Sbjct: 1 MSMSGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIF 60
Query: 57 LEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKM 109
+ ++K E RY L+D ++ + E L +SWC D A ++KKM
Sbjct: 61 YQMVEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKM 109
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 41.5 bits (93), Expect = 2e-04
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 7 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 63
+G+ + + EIKK RY++F + ++K+ V + E +E L+DL
Sbjct: 249 AGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP-- 306
Query: 64 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKML 110
E RY + +Y + E + + KL L+ WCPD ++K +M+
Sbjct: 307 -ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMV 347
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 40.3 bits (90), Expect = 4e-04
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 7 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 63
+G+ + + EIK RY +F + ++K+ V + E ++ L+DL
Sbjct: 2 AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59
Query: 64 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKML 110
T E RY + +Y ++ E +++ KL L+ WCPD +K KM+
Sbjct: 60 -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMV 100
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 32.3 bits (70), Expect = 0.095
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 42 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 90
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 83 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 32.3 bits (70), Expect = 0.095
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 42 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 90
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 42 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 90
D E GER + +L+DL++ C YG + E T+ G +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473
>SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)
Length = 597
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 38 EKQIDVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 90
E ++ GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 222 EVRLGRRLTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 277
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 42 DVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQ 80
+VET E++ + E+ +++ ++ G E + L FE TH+
Sbjct: 151 EVETTTEQDKQPEEVVKNSEEEGNHEDQEPLLSFEDTHE 189
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 20 EEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 68
E ++ + KH V I +E Q+++ET+ E LE T EC
Sbjct: 263 EIVELESKHSAHVEEILEEHQLEIETIKADYEEQRSALETKLFAVTSEC 311
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 37 DEKQIDVETVGERNAEYEQFLEDLQK 62
+++ D+ET G RN + ++ L D+ K
Sbjct: 180 EDESADIETAGARNQDEDEMLGDVSK 205
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 82 QGTSEASKKQKLFLMSWCPDTAKVKK 107
QGT + KQ L +W PD A++K+
Sbjct: 358 QGTDMLTDKQWERLANWLPDRARIKR 383
>SB_2401| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 818
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 24 KDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQG 83
KD + R + YI +D + G N ++ F + +K + F + ++C G
Sbjct: 34 KDSRDRALPVYIHRVSGVDFKEDGSNNQQF--FQQCYEKAKAHKPPLTFFGIQNKYECWG 91
Query: 84 TSE 86
T+E
Sbjct: 92 TTE 94
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 79 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKML 110
H+ Q A FL C D A +KKKML
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKML 272
>SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)
Length = 269
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 2 KFLEASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 61
+ LE + + C +EEI + K+ + V +++ D+ET+ + N ++++ +Q
Sbjct: 32 EILERDNGKLEERCDELFEEIVRMKESQREVEEEQEKLFKDIETLEDENFYLRKYVDKIQ 91
Query: 62 K 62
+
Sbjct: 92 E 92
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 61 QKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDT 102
+K GTG G FDF H+ + + A ++MS DT
Sbjct: 180 KKDGTGTTITGEFDFPVRHKAEIINIAVASNGKYIMSCSKDT 221
>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
Length = 934
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 41 IDVETVGERNAEYEQFLEDLQKGGTGECR 69
+ ET G R EYE+ L D + G CR
Sbjct: 704 VSPETPGNRGNEYERELRDGKDKAEGACR 732
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 41 IDVETVGERNAEYEQFLEDLQKGGTGECR 69
+ ET G R EYE+ L D + G CR
Sbjct: 560 VSPETPGNRGNEYERELRDGKDKAEGACR 588
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 37 DEKQIDVETVGER--NAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEA 87
DE + + +GE + E + + D K G+GE R+ F +Q + SEA
Sbjct: 23 DELRDVMRELGENPSDKEIQDMIADADKDGSGEIRFAQFMQLMNNQLRAGSEA 75
>SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43)
Length = 1402
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 20 EEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 65
EE +K ++ + ++ + VET+ AE + LE+L K T
Sbjct: 110 EEQEKSNSRLNIILFEVNKLNVQVETLNRELAEKDSQLEELNKERT 155
>SB_35564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 5 EASGVTV--SDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV 43
E G+T+ +D C++ KKD K R +V + R +++V
Sbjct: 266 ENLGITILPTDICRSHRTGKKKDSKPRQIVKFTRHNTKLEV 306
>SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 20 EEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 65
EE +K ++ + ++ + VET+ AE + LE+L K T
Sbjct: 416 EEQEKSNSRLNIILFEVNKLNVQVETLNRELAEKDSQLEELNKERT 461
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 20 EEIKKDKKHRYVVFYIRDEKQIDVETVG--ERNAEYEQFLEDLQK 62
E+ ++KK +Y+ + DE+ D + + + EY+ + E L+K
Sbjct: 306 EDKDEEKKVKYLTYESSDEQMYDTDDLNDDDTRGEYDDYEEMLRK 350
>SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8)
Length = 212
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 24 KDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYG 71
K KK + F +R K VE +GE + Q + ++ T ECR G
Sbjct: 55 KTKKFSKLEFCLRHPKFALVERLGEVERDGRQGRDSRRRQTTHECRGG 102
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 38 EKQIDVETVGERNAEYEQFLEDLQKGG 64
+KQ +E+V ERN++ E+ L+D + G
Sbjct: 151 DKQTMLESVHERNSDLERRLQDCKLSG 177
>SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6)
Length = 295
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 4 LEASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKG 63
+E++ +T AC+ T + E+Q+ VET ER A + LE +
Sbjct: 221 VESTNLTGPSACRNTTDSSGTGTGSNKTTENSASEEQLPVETTTEREAVPQGSLESAIRT 280
Query: 64 GTGEC 68
+ C
Sbjct: 281 KSNSC 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,782,649
Number of Sequences: 59808
Number of extensions: 140198
Number of successful extensions: 361
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 340
Number of HSP's gapped (non-prelim): 26
length of query: 113
length of database: 16,821,457
effective HSP length: 73
effective length of query: 40
effective length of database: 12,455,473
effective search space: 498218920
effective search space used: 498218920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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