Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000129-TA|BGIBMGA000129-PA|IPR002108|Actin-binding,
cofilin/tropomyosin type
(113 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 84 2e-17
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 84 2e-17
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 84 3e-17
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 83 4e-17
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 79 1e-15
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 78 2e-15
05_01_0103 + 686770-687017,687120-687270 77 2e-15
03_06_0479 + 34217170-34217172,34217337-34217786 77 4e-15
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 65 1e-11
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 46 5e-06
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 1.5
03_02_0403 + 8160664-8163690 28 2.0
04_03_0226 - 12977443-12977895 27 4.6
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 26 6.1
02_04_0145 - 20185263-20185421,20185640-20185798 26 6.1
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634... 26 8.0
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 84.2 bits (199), Expect = 2e-17
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 6 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 64
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 65 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
ECRY +FDF++ T E +K K+F +SW PDT+KV+ KMLY+
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYA 368
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 84.2 bits (199), Expect = 2e-17
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 6 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 64
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 65 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
+CR+ ++DF++ T+E K ++F + W PD AKV+ KMLY+
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYA 123
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 83.8 bits (198), Expect = 3e-17
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 9/108 (8%)
Query: 6 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 64
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 65 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
+CRY ++DF++ T E +K K+F ++W P ++++ KMLY+
Sbjct: 69 -SDCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYA 110
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 83.4 bits (197), Expect = 4e-17
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 6 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 64
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 65 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
ECRY +FDF++ T E +K K+F +SW PDT++V+ KMLY+
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYA 123
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 78.6 bits (185), Expect = 1e-15
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 8 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTG 66
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 67 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
ECRY ++D ++ T E +K K+F SW PDTA+ + KMLY+
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYA 110
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 77.8 bits (183), Expect = 2e-15
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 6 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 64
+SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+ FL L +
Sbjct: 11 SSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPEN- 69
Query: 65 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
+CRY L+DF++ T E +K K+F ++W P T++++ KMLYS
Sbjct: 70 --DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYS 110
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 77.4 bits (182), Expect = 2e-15
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 9 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 67
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 68 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
CRY +FD+++ T E +K K+F ++W PDT++V+ KM+Y+
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYA 97
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 76.6 bits (180), Expect = 4e-15
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 7 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 65
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 66 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYS 112
CRY ++D ++T T+ A + + K+F +SW P A V+ KM+Y+
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYA 115
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 64.9 bits (151), Expect = 1e-11
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 9 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 67
+ V + K+ + E+K+ K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 68 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
CRY ++D ++ + + +K K+F +SW P ++++ K +Y+
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYA 116
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 46.4 bits (105), Expect = 5e-06
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 9 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 67
+ V + K+ + E+ + K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL----PAD 95
Query: 68 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 112
Y L DF C +K K+F +SW P + ++ K +Y+
Sbjct: 96 AVYDL-DFVSDDNC-------RKSKIFFISWSPSLSCIRAKTIYA 132
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 18 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 66
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>03_02_0403 + 8160664-8163690
Length = 1008
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 5 EASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLE 58
EA T SDA E+ + +HR+ ++I + Q +V E+ A +F E
Sbjct: 420 EAITTTYSDAVAEAVAEVLPNARHRFCFWHILKKLQENVGRTNEKEAISLRFKE 473
>04_03_0226 - 12977443-12977895
Length = 150
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 35 IRDEKQIDVETVGERNAEYEQFLEDLQKGG 64
+R+E +D+E G AE E+ DL+ GG
Sbjct: 112 MREEAAVDLEPGGGGGAEEEEAAVDLEPGG 141
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 53 YEQFLEDLQKGGTGECRYGLF 73
YE F EDL+ G E +GLF
Sbjct: 344 YELFNEDLRPGPVSEANWGLF 364
>02_04_0145 - 20185263-20185421,20185640-20185798
Length = 105
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 24 KDKKHRYVVFYIRDEKQIDVETVG-ERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQ 82
++KKH ++ + +D ++ V ++ ++ + LE L GG G G + HQ +
Sbjct: 3 EEKKHHHLFHHKKDGEEESSGVVDYDKEKKHHKHLEQL--GGLGAIAAGAYALHEKHQAK 60
Query: 83 GTSEASKKQKL 93
+E + K+
Sbjct: 61 KDTENAHGHKV 71
>03_02_0197 +
6337212-6337278,6339261-6340517,6340599-6340626,
6340735-6340897
Length = 504
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 53 YEQFLEDLQKGGTGECRYGLFD 74
YE + ED + G T E +GLFD
Sbjct: 316 YELYDEDTRPGSTSEKYWGLFD 337
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,143,117
Number of Sequences: 37544
Number of extensions: 116679
Number of successful extensions: 309
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 276
Number of HSP's gapped (non-prelim): 16
length of query: 113
length of database: 14,793,348
effective HSP length: 73
effective length of query: 40
effective length of database: 12,052,636
effective search space: 482105440
effective search space used: 482105440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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