GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000129-TA|BGIBMGA000129-PA|IPR002108|Actin-binding,
cofilin/tropomyosin type
         (113 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.22 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.22 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.22 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.22 
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    23   2.0  
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    23   2.0  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   2.7  
AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding pr...    21   8.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 11  VSDACKTTYEEIKKDKKHRYVVFYIRD 37
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 11  VSDACKTTYEEIKKDKKHRYVVFYIRD 37
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
          female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 11 VSDACKTTYEEIKKDKKHRYVVFYIRD 37
          +  AC   +E+I  + KH + + Y+RD
Sbjct: 47 ILSACSPYFEQIFVENKHPHPIIYLRD 73


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 11  VSDACKTTYEEIKKDKKHRYVVFYIRD 37
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHLHPIIYLRD 121


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 5   EASGVTVSDACKTTYEEIK 23
           E S +   D C+T YE +K
Sbjct: 117 ECSHIVTPDKCETAYETVK 135


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 5   EASGVTVSDACKTTYEEIK 23
           E S +   D C+T YE +K
Sbjct: 117 ECSHIVTPDKCETAYETVK 135


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 36  RDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLF 73
           R   + D E +G  + +    L D   G T  C Y LF
Sbjct: 119 RHSSESDREGMGHDSHKRTHRLSDSDGGSTEGCNYDLF 156


>AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding
           protein AgamOBP28 protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)

Query: 6   ASGVTVSDACKTTYEEIK 23
           ++GV V D+C+T +  ++
Sbjct: 107 SAGVEVEDSCETAFRAVE 124


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,188
Number of Sequences: 2123
Number of extensions: 4809
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 113
length of database: 516,269
effective HSP length: 56
effective length of query: 57
effective length of database: 397,381
effective search space: 22650717
effective search space used: 22650717
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)