Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000128-TA|BGIBMGA000128-PA|undefined
(1364 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 36 0.30
SB_37699| Best HMM Match : Peptidase_M13_N (HMM E-Value=0) 34 0.91
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 34 0.91
SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.1
SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.1
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.8
SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.7
SB_46612| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.8
SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13) 31 6.4
SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 8.5
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 35.5 bits (78), Expect = 0.30
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 604 KLLNIKY----SNYKLKIETSTSETFDMSSILPCLNSAQWIDLMSKIKDEETIVLYKQIA 659
K NI+Y SNY + + + + C++S ++ L++ + D++ + Y++
Sbjct: 571 KTFNIQYGMCISNYMILLNLLSDQDIQYGM---CISS--YMILLNLLSDQD--IQYEKCI 623
Query: 660 KTLIKRYSNNSDAKLFNDVTISNNRVLLNYLTLETVKQIAKCFDNADSLSKAISKIDFTK 719
+ + SD + ISN +LLN L+ + + Q KC N L +S D
Sbjct: 624 SNYVILLNLLSDQDIQYGKCISNYMILLNLLSDQNI-QYGKCISNYVILLNLLSDQDIQY 682
Query: 720 SFCKKIDMKEYFL 732
C+ MK FL
Sbjct: 683 GMCRSNYMKLIFL 695
>SB_37699| Best HMM Match : Peptidase_M13_N (HMM E-Value=0)
Length = 876
Score = 33.9 bits (74), Expect = 0.91
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 634 LNSAQWIDLMSKI---------KDEETIVLYKQIAKTLIKRYSNNSDAKLFNDVTISNNR 684
+NS W+D +KI KDE Y + K IKR+ + N+ +N
Sbjct: 632 VNSIPWMDKTTKIAVSEKADSMKDEVGYPAYLKGGKKFIKRFKKYKGVTMKNNALFANRI 691
Query: 685 VLLNYLTLETVKQIAKCFDNADSLS 709
+L +K++ K D DSLS
Sbjct: 692 AILKMAHKRMLKKLRKPVDKEDSLS 716
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 33.9 bits (74), Expect = 0.91
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 431 LSQILPYIKNNLEDSNTEQFELKQSVTACLENGTDCENLMKKIINGNDIFPEECVESYGK 490
+++ L I NN +Q + + + T L N + + + K +IN N+ P + + Y
Sbjct: 742 ITKTLININNNNPTQQQKQQQQQSTTTNTLNNNKNTQQITKTLININNNNPTQQQQPYSS 801
Query: 491 YTSELMFRQN 500
+ ++FRQ+
Sbjct: 802 MQTTILFRQD 811
>SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 32.7 bits (71), Expect = 2.1
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 27/280 (9%)
Query: 903 HRSILADLQDKLHRELLKAFKNIDFVNGSFVK---NISGNTENSMV-ESNAATLNAMAAY 958
+R I+ +L+++LH E ++ +I + S N+ E +++ + +A Y
Sbjct: 150 YRDIVKELEERLH-ETIEGRDHILALRESEAASQLNLVKQLEAALLKQKQSAADKDQLEY 208
Query: 959 TLTLSKYCEATKPDE-ANEMECVLKGLEFFVETSIRTIEEATSESQQIESSLGLLNVMLR 1017
+ SK TK ++ +N+ E + L+ + + ++ A S S L L L+
Sbjct: 209 DIQSSKSDSQTKMEKLSNDYEARITNLK---DDHSKALDIAASRSASARDDLDQLQQQLK 265
Query: 1018 HIKKLDTHEMFKEKDKLFSGIWRSLKTRLSIVFSGKASAS-CLDDGLATLRSVCESMSVE 1076
HIK+ E+ DK+ +SL+ L V K S + +T + VE
Sbjct: 266 HIKEQHITEISAMDDKM-----KSLRLELESVSKQKNDLSKQFETQSSTFENTSRETQVE 320
Query: 1077 CFVANVAEELMNLSLLKKPA--IMLKDKSNG---DLTS--HKVSRYIWAQCLKANIVGPK 1129
+ +E + +S ++ A I+L+++ +L S H++ + + N+ +
Sbjct: 321 LNLIRKEKEQLQVSASREQANSIILQERLTSCEQELASERHRLQELMEEKKAFENVKSEE 380
Query: 1130 CAALTKVI--ARSC---KSLRFWLRQHYEWDSVASKKRKK 1164
L + ARS K F+ + E VAS++++K
Sbjct: 381 ITKLNNEVREARSLLQQKEQEFYQQAEQEMRRVASEEQEK 420
>SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1868
Score = 32.7 bits (71), Expect = 2.1
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 333 LTDTFGEKISKVEIKKNFMSFLQAVMMGQLKLDGKPD-KATMNIIKTALKLDPTLIEQKL 391
+T SKV KN+ + L V K+ + K +KT KL LI +K
Sbjct: 1193 ITHFLSNDSSKVRFYKNYNNKLNRVKEAAKKVYFENQFKLNSGNLKTTWKLIGLLINRKN 1252
Query: 392 TVILPPIMTAKKHNAYKCYVDMLS 415
+ LPPI +N KCY D S
Sbjct: 1253 STSLPPIAKLIYNN--KCYTDKAS 1274
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 32.3 bits (70), Expect = 2.8
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 328 DISIRLTDTFGEKISKVEIKKNFMSFLQAVMMGQLKLDGKPDKATMNIIKTALKLDPT-- 385
D S+ L F S E KK+F+ F + +KL+ + +KL T
Sbjct: 773 DYSLLLPTRFSSFASAPEYKKHFLRFFCTLTANLVKLEDDVVHKERLLSSLEVKLQQTRN 832
Query: 386 -LIEQKLTVILPPIMTAKKHNA-YKCYVDMLSCLMEMLFKLSRGIPFLSQILPYIKNNLE 443
L+E + V + A A + CYV M L R + F S IL ++ L+
Sbjct: 833 SLVESQEEVC--SLKGADIQTATFVCYVYMCKVGGLTLCSSYRSLLFSSDILSSTEHQLQ 890
Query: 444 DSNTEQFELKQSV 456
+ T+ EL++ V
Sbjct: 891 EDKTKIRELEEQV 903
>SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 31.9 bits (69), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 455 SVTACLENGTDCENLMKKIINGNDIFPEECVESYGK 490
SVT+ +G CE+ ++K N D++P CV S G+
Sbjct: 451 SVTSASRSGRACEDEIEKEWNEQDLYPAFCVHSAGQ 486
>SB_46612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 31.9 bits (69), Expect = 3.7
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 635 NSAQWIDLMSKIKDEETIVLYKQIAKTLIKRYSNNSDAKLFNDVTISNNRVLLNYLTLET 694
N ++W+DL SKI+DE+ L + + I++Y N + V + ++ + E
Sbjct: 8 NPSEWLDLRSKIEDEKFRQLSADLERRRIRKY--NFHLEELQKVQNELKNLQIDRMRFER 65
Query: 695 VKQIAKCFDNADSLSKAISKIDFT 718
K + K N SL+K KI T
Sbjct: 66 EKLLRK--RNIASLAKERKKISKT 87
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 4.8
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 841 LASSVKRVKANNEIVKKLVELIINKENKALNSIEGFREPAFQISCIILPLIA-KQKKALT 899
L VK+ + + + VK+LV+ II + + S + I L+A KQK
Sbjct: 1676 LKGEVKKAQDDADSVKRLVDAIIEENDTLKQSEHDLLAIQEDLEHTIDELVAEKQKLIQE 1735
Query: 900 TSAHRSILADLQDKLHRELLKAFKNIDFVNGSFVKNISGNTENSMVESNAATLNAMAAYT 959
SA S L ++++++ + K + + ++ SF+ TEN + S T+N +
Sbjct: 1736 NSALVSSLHAEKEEMYKTIEKLQQERNMLHESFIA-----TENDLEISIKETVN-LEKQV 1789
Query: 960 LTLSKYCEATKPDEANEMECVLKGLEFFVETSIRTIEEA 998
LS+ K + ++ +++ E +ET + +E A
Sbjct: 1790 EMLSRESSTMKQEAEERIKKLIELEEKAIETMEKKLEIA 1828
>SB_5070| Best HMM Match : TPR_2 (HMM E-Value=1.4e-13)
Length = 732
Score = 31.1 bits (67), Expect = 6.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 459 CLENGTDCENLMKKIINGNDIFPEECVESYGK-YTSELMFRQNKEVLE-LLQKDFEEHC 515
C++ DC N + K++N P EC++ Y K + S + + K V E L+ F C
Sbjct: 389 CIDTFNDCVNTLGKVLN-----PNECLKLYKKLHKSAVEMKDEKRVSECLISVGFRHMC 442
>SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1801
Score = 30.7 bits (66), Expect = 8.5
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 882 QISCIILPLIAKQKKALTTSAHRSI--LADLQDKLHRELL-KAFKNIDFVNGSFVKNI-S 937
Q+ I L LI + K +TT+A S + K R LL KA+ ID VN ++
Sbjct: 1143 QMDGIYLGLIEELLKLVTTTAQYSEQQTQETAKKFWRALLHKAYDIIDKVNQLLPTSVFI 1202
Query: 938 GNTENSMVESNAAT-LNAMAAYTLTLSKYCEATKPDEANEMECVLKGLEFFVETSIRTIE 996
G + +V N AM L+ Y +P++ NE+ ++ L FVE + E
Sbjct: 1203 GVIQRLLVNDNVTVRRKAMELLNAKLAHY--TIQPNQVNELLDLVNDLVAFVEGRC-SGE 1259
Query: 997 EATSESQQIESSLGLLNVML 1016
E Q SL LL +L
Sbjct: 1260 ETAVNRQTALYSLKLLARLL 1279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,956,629
Number of Sequences: 59808
Number of extensions: 1590444
Number of successful extensions: 3939
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3931
Number of HSP's gapped (non-prelim): 18
length of query: 1364
length of database: 16,821,457
effective HSP length: 91
effective length of query: 1273
effective length of database: 11,378,929
effective search space: 14485376617
effective search space used: 14485376617
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 66 (30.7 bits)
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