Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000128-TA|BGIBMGA000128-PA|undefined
         (1364 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   2.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   2.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   5.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   5.6  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   7.4  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    24   7.4  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    24   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 513 EHCLMMLEEGFVSPSIITIAEVLAAILSSFLRYNKMADHTVPFQISEDFWNAFDKFEREC 572
           + CL+ LE+ +   + +  ++ L  ILS+   YN    ++ PF I          F    
Sbjct: 436 QRCLLSLEKTYERDTCLLASDALKQILSA--AYNVELHNSSPFSIYSFLERLNLIFMSSS 493

Query: 573 LKRFGECTLKLSYNPPLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETS 620
           L+     TL +++   + +  L    S +  KL  I    +  K+E+S
Sbjct: 494 LQWSSTHTLDVAWRRKVTIEILN---SLSATKLSKIILMQFGDKLESS 538


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 513 EHCLMMLEEGFVSPSIITIAEVLAAILSSFLRYNKMADHTVPFQISEDFWNAFDKFEREC 572
           + CL+ LE+ +   + +  ++ L  ILS+   YN    ++ PF I          F    
Sbjct: 474 QRCLLSLEKTYERDTCLLASDALKQILSA--AYNVELHNSSPFSIYSFLERLNLIFMSSS 531

Query: 573 LKRFGECTLKLSYNPPLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETS 620
           L+     TL +++   + +  L    S +  KL  I    +  K+E+S
Sbjct: 532 LQWSSTHTLDVAWRRKVTIEILN---SLSATKLSKIILMQFGDKLESS 576


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 987  FVETSIRTIEEATSESQQIESSLGLLNVMLRHIKKLDTHEMFKEKDKLFSGIWRSLKTRL 1046
            F+ET      +   E Q  E    LL+V+  H+      ++    D  F  I+ S    +
Sbjct: 213  FLETRQSLEVQLVIEEQSTEQERLLLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENV 272

Query: 1047 SIVFS 1051
            SI+++
Sbjct: 273  SILYA 277


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 446 NTEQFELKQSVTACLENGTDCENLMKKIING 476
           N +Q++LK+++  CL  G  C+ +   +  G
Sbjct: 426 NGDQYDLKKNLKVCLPPGQYCDVISGNLEKG 456


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 158 YKECKKKLEFIIKFISEDHLET 179
           + E KKK +FI  F+SE++  T
Sbjct: 457 FVEMKKKADFIAVFLSENNYPT 478


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 911 QDKLHRELLKAFKNIDFVNGSFVKNISGNTENS 943
           +DK  RE  K  K I  ++ +++ NIS    N+
Sbjct: 306 RDKTERERSKERKIISSLSNNYISNISNYNNNN 338


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 911 QDKLHRELLKAFKNIDFVNGSFVKNISGNTENS 943
           +DK  RE  K  K I  ++ +++ NIS    N+
Sbjct: 68  RDKRERERSKERKIISSLSNNYISNISNYNNNN 100


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,938
Number of Sequences: 429
Number of extensions: 15192
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 9
length of query: 1364
length of database: 140,377
effective HSP length: 66
effective length of query: 1298
effective length of database: 112,063
effective search space: 145457774
effective search space used: 145457774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)