GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000128-TA|BGIBMGA000128-PA|undefined
         (1364 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   4.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    25   4.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   8.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   8.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 182  SFLGTECSSDIIELCQNVMFPI--TRKSCYISYLQTLIRKDNINELM 226
            SFLG  C++D+  +C      I   R   Y  YL    +     EL+
Sbjct: 999  SFLGIICAADVFYICHVCYATIQEVRAKIYFFYLVKFYKVSKSGELI 1045


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 182 SFLGTECSSDIIELCQNVMFPI--TRKSCYISYLQTLIRKDNINELM 226
           SFLG  C++D+  +C      I   R   Y  YL    +     EL+
Sbjct: 280 SFLGIICAADVFYICHVCYATIQEVRAKIYFFYLVKFYKVSKSGELI 326


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 422 FKLSRGIPFLSQILPYIKNNLEDSNTEQFELKQSVTACLEN 462
           FK+S      SQ++ Y + N     T QFE +Q   +  EN
Sbjct: 29  FKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSEN 69


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 422 FKLSRGIPFLSQILPYIKNNLEDSNTEQFELKQSVTACLEN 462
           FK+S      SQ++ Y + N     T QFE +Q   +  EN
Sbjct: 49  FKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSEN 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 1148 LRQHYEWDSVASKKRKKIDLYDERNVKIV 1176
            L+ H  W  + ++  KK+  Y  R VK++
Sbjct: 2367 LKPHDSWADIDNEFYKKVVSYKSRGVKVL 2395


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 585 YNP-PLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETSTSET 624
           Y P P+VLS +K C+S+    L ++   + +L  E   ++T
Sbjct: 270 YKPLPIVLSIVKNCLSYC-FNLYHLASKSNQLSREAKVTKT 309


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 585 YNP-PLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETSTSET 624
           Y P P+VLS +K C+S+    L ++   + +L  E   ++T
Sbjct: 270 YKPLPIVLSIVKNCLSYC-FNLYHLASKSNQLSREAKVTKT 309


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,872
Number of Sequences: 317
Number of extensions: 12190
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 7
length of query: 1364
length of database: 114,650
effective HSP length: 65
effective length of query: 1299
effective length of database: 94,045
effective search space: 122164455
effective search space used: 122164455
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)