Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000128-TA|BGIBMGA000128-PA|undefined
(1364 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 35 1.7
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 35 2.3
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 35 2.3
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 35 2.3
BC068031-1|AAH68031.2| 426|Homo sapiens RAD9B protein protein. 33 5.3
AY297459-1|AAQ62859.1| 414|Homo sapiens RAD9B protein. 33 5.3
AK124109-1|BAC85774.1| 345|Homo sapiens protein ( Homo sapiens ... 33 5.3
U32989-1|AAB08514.1| 406|Homo sapiens tryptophan oxygenase prot... 33 9.3
BC005355-1|AAH05355.1| 406|Homo sapiens tryptophan 2,3-dioxygen... 33 9.3
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 35.1 bits (77), Expect = 1.7
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3290 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3346
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3347 KDEAEKLMTYVDTSINI 3363
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 34.7 bits (76), Expect = 2.3
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 6/174 (3%)
Query: 936 ISGNTENSMVESNAATLNAM-AAYTLTLSKYCEATKPDEANEMECVLKGLEFFVETSIRT 994
+ G EN E A N AA SK T + M L+GLE V T
Sbjct: 2430 LKGRVENLERELEIARTNQEHAALEAENSKGEVETLKAKIEGMTQSLRGLELDVVTIRSE 2489
Query: 995 IEEATSESQQIE---SSLGLLNVMLRHIKKLDTHEMFKEKDKLFSGIWRSLKTRLSIVFS 1051
E+ T+E Q+ + S L ++N +I + E + K+K S L+T+L +
Sbjct: 2490 KEDLTNELQKEQERISELEIINSSFENILQEKEQEKVQMKEK-SSTAMEMLQTQLK-ELN 2547
Query: 1052 GKASASCLDDGLATLRSVCESMSVECFVANVAEELMNLSLLKKPAIMLKDKSNG 1105
+ +A D + S VEC A+ L L K I+L+ NG
Sbjct: 2548 ERVAALHNDQEACKAKEQNLSSQVECLELEKAQLLQGLDEAKNNYIVLQSSVNG 2601
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3. ).
Length = 5635
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 3289 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 3345
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 3346 KDEAEKLMTLVDTSINI 3362
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 34.7 bits (76), Expect = 2.3
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 937 SGNTENSMVESNAATLNAMAAYTLTLSKY-CEATKPDEANEMECVLKGLEFFVETSIR-T 994
SG TE V +N +TLN A T KY C AT P A E + + L +V +IR
Sbjct: 327 SGETERIRVSANGSTLNIYGALTSDTGKYTCVATNP--AGEEDRIF-NLNVYVTPTIRGN 383
Query: 995 IEEATSESQQIESSLGL 1011
+EA +++S+ +
Sbjct: 384 KDEAEKLMTLVDTSINI 400
>BC068031-1|AAH68031.2| 426|Homo sapiens RAD9B protein protein.
Length = 426
Score = 33.5 bits (73), Expect = 5.3
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 515 CLMMLEEGFVSPSIITIAEVLAAILSSFLRYNKMADHTVPFQISEDFWNAFDKFERECLK 574
CL LE I T ++ ++ F R+ H + FQ S+ FDK
Sbjct: 96 CLNSLERNIEKCRIFTRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDK------- 148
Query: 575 RFGECTLKLSYNPPLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETSTSETFDMSS 629
CT L P L+ + L S + L + N+ LK +S E+ D+S+
Sbjct: 149 --NVCTNTLMIQPRLLADAIVLFTSSQEEVTLAVTPLNFCLK--SSNEESMDLSN 199
>AY297459-1|AAQ62859.1| 414|Homo sapiens RAD9B protein.
Length = 414
Score = 33.5 bits (73), Expect = 5.3
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 515 CLMMLEEGFVSPSIITIAEVLAAILSSFLRYNKMADHTVPFQISEDFWNAFDKFERECLK 574
CL LE I T ++ ++ F R+ H + FQ S+ FDK
Sbjct: 96 CLNSLERNIEKCRIFTRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDK------- 148
Query: 575 RFGECTLKLSYNPPLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETSTSETFDMSS 629
CT L P L+ + L S + L + N+ LK +S E+ D+S+
Sbjct: 149 --NVCTNTLMIQPRLLADAIVLFTSSQEEVTLAVTPLNFCLK--SSNEESMDLSN 199
>AK124109-1|BAC85774.1| 345|Homo sapiens protein ( Homo sapiens
cDNA FLJ42115 fis, clone TESTI2003573, weakly similar
to Mus musculus cell cycle checkpoint control protein
Mrad9 gene. ).
Length = 345
Score = 33.5 bits (73), Expect = 5.3
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 515 CLMMLEEGFVSPSIITIAEVLAAILSSFLRYNKMADHTVPFQISEDFWNAFDKFERECLK 574
CL LE I T ++ ++ F R+ H + FQ S+ FDK
Sbjct: 27 CLNSLERNIEKCRIFTRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDK------- 79
Query: 575 RFGECTLKLSYNPPLVLSFLKLCVSFAQLKLLNIKYSNYKLKIETSTSETFDMSS 629
CT L P L+ + L S + L + N+ LK +S E+ D+S+
Sbjct: 80 --NVCTNTLMIQPRLLADAIVLFTSSQEEVTLAVTPLNFCLK--SSNEESMDLSN 130
>U32989-1|AAB08514.1| 406|Homo sapiens tryptophan oxygenase
protein.
Length = 406
Score = 32.7 bits (71), Expect = 9.3
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 644 SKIKDEETIVLYKQIAKTLIKR--YSNNSDAKLFNDVTISNNRVLLNYLT-LETVKQIAK 700
+KI DE ++ Q + K+ + +S ++F + + + R +L ++ + V I K
Sbjct: 64 NKIHDEHLFIITHQAYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILK 123
Query: 701 CFDNADSLSKAISKIDFTKSFCKKIDMKEYFLNIT-IPTENFDTIKNYIELLKNLQVPYL 759
S+ + ++ +DF D +EY + + F ++N I +L+N++VPY
Sbjct: 124 LLVQQFSILETMTALDFN-------DFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYN 176
Query: 760 DENYQ 764
+Y+
Sbjct: 177 RRHYR 181
>BC005355-1|AAH05355.1| 406|Homo sapiens tryptophan 2,3-dioxygenase
protein.
Length = 406
Score = 32.7 bits (71), Expect = 9.3
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 644 SKIKDEETIVLYKQIAKTLIKR--YSNNSDAKLFNDVTISNNRVLLNYLT-LETVKQIAK 700
+KI DE ++ Q + K+ + +S ++F + + + R +L ++ + V I K
Sbjct: 64 NKIHDEHLFIITHQAYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILK 123
Query: 701 CFDNADSLSKAISKIDFTKSFCKKIDMKEYFLNIT-IPTENFDTIKNYIELLKNLQVPYL 759
S+ + ++ +DF D +EY + + F ++N I +L+N++VPY
Sbjct: 124 LLVQQFSILETMTALDFN-------DFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYN 176
Query: 760 DENYQ 764
+Y+
Sbjct: 177 RRHYR 181
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.135 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,194,688
Number of Sequences: 224733
Number of extensions: 6626952
Number of successful extensions: 14287
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 14274
Number of HSP's gapped (non-prelim): 31
length of query: 1364
length of database: 73,234,838
effective HSP length: 99
effective length of query: 1265
effective length of database: 50,986,271
effective search space: 64497632815
effective search space used: 64497632815
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 71 (32.7 bits)
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