GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000127-TA|BGIBMGA000127-PA|IPR002478|PUA
         (180 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione S-tran...    27   0.34 
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    26   0.59 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.1  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   4.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.5  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   5.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.2  

>AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione
           S-transferase u3 protein.
          Length = 218

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 10  RILFEKLTKYIGV-NVKLLIDRPDGTYCFREKKDRVYYISEKL 51
           R+ F+  T ++ + NV + + R   T   +EKKD VY   EKL
Sbjct: 99  RLYFDSGTLFVALRNVLMTVLRSGETRIPQEKKDAVYKALEKL 141


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 26.2 bits (55), Expect = 0.59
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 2   KVLSEDRTRILFE--KLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLHLAQTVK 59
           KV S    R+ F+   L K I  NV +LI++   +   R K ++   ++EK +   + V 
Sbjct: 88  KVRSIVNQRLFFDIGTLYKNILANVDVLIEKQQPSAELRGKLEQALDLTEKFVTECRFVA 147

Query: 60  PDNLVSAGT-CFGKFTKTNKFR 80
            D+L  A     G  T    FR
Sbjct: 148 ADHLTLADIFMLGSITALEWFR 169


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 153 CRHADPLATIVFHQADVGEYIRSEDTLT 180
           CRH   +A++V H  D    +  ED LT
Sbjct: 571 CRHVTEMASLVIHDVDP---LAREDDLT 595


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 65  SAGTCFGKFTKTNKFRLH 82
           S   CF +FT++N  + H
Sbjct: 269 SCDVCFARFTQSNSLKAH 286


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 20  IGVNVKLLIDRPDGTY 35
           +GV+ K ++DR DG++
Sbjct: 148 VGVHFKQIVDREDGSF 163


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 15/46 (32%), Positives = 18/46 (39%)

Query: 135 TMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEYIRSEDTLT 180
           T +  P G  VAS TTAE       AT         E   +E+  T
Sbjct: 118 TSTAAPEGTSVASPTTAEASTTTEAATTTQEATTTEEATTTEEATT 163


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 152 ECRHADPLATIVFHQADVGEYIRSE 176
           EC+H D LA   FH  D+    R E
Sbjct: 287 ECKHRDRLAQRAFH-TDLYSTFRDE 310


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,495
Number of Sequences: 2123
Number of extensions: 6572
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 7
length of query: 180
length of database: 516,269
effective HSP length: 60
effective length of query: 120
effective length of database: 388,889
effective search space: 46666680
effective search space used: 46666680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)