GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000126-TA|BGIBMGA000126-PA|undefined
         (179 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.2  
DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.        22   9.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   9.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 15   NLDTVALETDSEEVKSRKRVRRQLKSM 41
            N   VAL T SEE K  KR   + K +
Sbjct: 1102 NRKGVALPTSSEETKRAKRENLEQKQI 1128


>DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.
          Length = 93

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query: 3  DVALSQVGEHLNNLDTVALETDSEEV 28
          D+ + ++  HLNN+     +T + +V
Sbjct: 57 DLEIQEIENHLNNIIAAGSDTTASQV 82


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 127 KLVVRQMDTNERKKLKRYGKLPEGWTPG 154
           KL +R+  T ER+K+ +     +  TPG
Sbjct: 694 KLQLRKERTEERRKMFKIASSTQQQTPG 721


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,388
Number of Sequences: 2123
Number of extensions: 2851
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 179
length of database: 516,269
effective HSP length: 60
effective length of query: 119
effective length of database: 388,889
effective search space: 46277791
effective search space used: 46277791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)