GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000126-TA|BGIBMGA000126-PA|undefined
         (179 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   1.7  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   3.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   3.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.2  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 13  LNNLDTVALETDSEEVKSRKRVRRQLKSM 41
           LN++   A+  DS +++SRK V + L ++
Sbjct: 247 LNSVVQGAIHGDSRQIQSRKSVIKMLSAV 275


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 2   CDVALSQVGEHLNNLDTVALETDSEEVKSRKRVRRQLKSMAPCIN 46
           C +  +    H+   D + L+    E+ +RK +   +K ++ CIN
Sbjct: 77  CFITCALEKSHIIQNDEIQLDK-LVEMANRKNISIDVKMLSECIN 120


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 7   SQVGEHLNNLDTVALETDSEEVKSR 31
           SQ G+ +NN +  A E D+E + ++
Sbjct: 460 SQYGDPINNCEIKAGEIDAERLNNQ 484


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 6   LSQVGEHLNNLDTVALETDSEEVKSRKRVRRQLKSMAPCINLIMKEI 52
           + ++ E   + D  A   D+ E+K  +R   +   M P + LI +EI
Sbjct: 375 IQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREI 421


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,860
Number of Sequences: 429
Number of extensions: 1132
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 179
length of database: 140,377
effective HSP length: 54
effective length of query: 125
effective length of database: 117,211
effective search space: 14651375
effective search space used: 14651375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)